Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 Y_RNA.306-201ENST00000365015 102 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 Y_RNA.308-201ENST00000365043 101 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 Y_RNA.312-201ENST00000365089 102 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 Y_RNA.322-201ENST00000365151 102 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 RNU2-38P-201ENST00000410856 79 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 AL445567.1-201ENST00000439121 144 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 Y_RNA.650-201ENST00000459002 102 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 RNU6-120P-201ENST00000516077 103 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 Y_RNA.777-201ENST00000516982 102 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 Y_RNA.771-201ENST00000598668 102 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 Y_RNA.789-201ENST00000622480 102 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 AC024614.3-201ENST00000637860 256 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 RNU4-90P-201ENST00000362773 141 ntBASIC-3.32□□□□□ -2.94
CHD1O14646 Y_RNA.286-201ENST00000364813 102 ntBASIC-3.32□□□□□ -2.94
CHD1O14646 RNU4-43P-201ENST00000410628 137 ntBASIC-3.32□□□□□ -2.94
CHD1O14646 Y_RNA.695-201ENST00000516715 107 ntBASIC-3.32□□□□□ -2.94
CHD1O14646 Y_RNA.83-201ENST00000363005 113 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 RNU6-510P-201ENST00000391239 108 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 RNA5SP236-201ENST00000516169 116 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 RNU6-1018P-201ENST00000516577 106 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 MIR3140-201ENST00000583685 90 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 AC012531.4-201ENST00000616509 177 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 RNU6-978P-201ENST00000364371 103 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 RNU6-608P-201ENST00000383927 104 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 Y_RNA.793-201ENST00000411222 111 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 AC096644.2-201ENST00000429278 159 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 AC138305.3-201ENST00000624988 240 ntBASIC-3.33□□□□□ -2.94
CHD1O14646 Y_RNA.813-201ENST00000364639 102 ntBASIC-3.34□□□□□ -2.94
CHD1O14646 MIR548G-201ENST00000408442 89 ntBASIC-3.34□□□□□ -2.94
CHD1O14646 RNU6-908P-201ENST00000410160 94 ntBASIC-3.34□□□□□ -2.94
CHD1O14646 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-3.34□□□□□ -2.94
CHD1O14646 AC097484.2-201ENST00000509147 251 ntBASIC-3.34□□□□□ -2.94
CHD1O14646 MTND3P22-201ENST00000510932 243 ntBASIC-3.34□□□□□ -2.94
CHD1O14646 AC119751.7-201ENST00000600494 245 ntBASIC-3.34□□□□□ -2.94
CHD1O14646 RNU6-1272P-201ENST00000362776 107 ntBASIC-3.35□□□□□ -2.95
CHD1O14646 Y_RNA.80-201ENST00000362996 102 ntBASIC-3.35□□□□□ -2.95
CHD1O14646 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-3.35□□□□□ -2.95
CHD1O14646 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.35□□□□□ -2.95
CHD1O14646 RPS29P30-201ENST00000600975 111 ntBASIC-3.35□□□□□ -2.95
CHD1O14646 SNORD115-31-201ENST00000365318 82 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 RNY4P10-201ENST00000365571 96 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 RNU6-630P-201ENST00000391258 106 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-3.36□□□□□ -2.95
CHD1O14646 SNORD11.1-201ENST00000459482 85 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 RNU6-1314P-201ENST00000517139 104 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 Y_RNA.339-201ENST00000365325 102 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 AC099799.1-201ENST00000439809 192 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 MIR3657-201ENST00000584818 117 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.36□□□□□ -2.95
CHD1O14646 SNORD113-8-201ENST00000363497 74 ntBASIC-3.37□□□□□ -2.95
CHD1O14646 Y_RNA.152-201ENST00000363578 100 ntBASIC-3.37□□□□□ -2.95
CHD1O14646 RNA5SP106-201ENST00000517274 100 ntBASIC-3.38□□□□□ -2.95
CHD1O14646 AC015540.1-201ENST00000615828 501 ntBASIC-3.38□□□□□ -2.95
CHD1O14646 MIR6739-201ENST00000622461 75 ntBASIC-3.38□□□□□ -2.95
CHD1O14646 SNORD38.1-201ENST00000363863 68 ntBASIC-3.39□□□□□ -2.95
CHD1O14646 AC021753.1-201ENST00000635724 168 ntBASIC-3.39□□□□□ -2.95
CHD1O14646 AL021921.1-201ENST00000442774 93 ntBASIC-3.39□□□□□ -2.95
CHD1O14646 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-3.39□□□□□ -2.95
CHD1O14646 HSPE1P25-201ENST00000455484 251 ntBASIC-3.39□□□□□ -2.95
CHD1O14646 RNU6-518P-201ENST00000516056 96 ntBASIC-3.39□□□□□ -2.95
CHD1O14646 RNU6-766P-201ENST00000362478 107 ntBASIC-3.4□□□□□ -2.95
CHD1O14646 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.4□□□□□ -2.95
CHD1O14646 SNORA24B-201ENST00000384176 131 ntBASIC-3.4□□□□□ -2.95
CHD1O14646 Y_RNA.773-201ENST00000607168 90 ntBASIC-3.4□□□□□ -2.95
CHD1O14646 UBE2WP1-201ENST00000362030 340 ntBASIC-3.41□□□□□ -2.95
CHD1O14646 RNU6-451P-201ENST00000362921 107 ntBASIC-3.41□□□□□ -2.95
CHD1O14646 RNU6-563P-201ENST00000364872 108 ntBASIC-3.41□□□□□ -2.95
CHD1O14646 RNU6-662P-201ENST00000384253 104 ntBASIC-3.41□□□□□ -2.95
CHD1O14646 Y_RNA.599-201ENST00000410489 109 ntBASIC-3.41□□□□□ -2.95
CHD1O14646 AL691482.2-201ENST00000457453 84 ntBASIC-3.41□□□□□ -2.95
CHD1O14646 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.41□□□□□ -2.96
CHD1O14646 SNORA40.4-201ENST00000390971 128 ntBASIC-3.41□□□□□ -2.96
CHD1O14646 MIR5693-201ENST00000577722 73 ntBASIC-3.41□□□□□ -2.96
CHD1O14646 AC006254.2-201ENST00000603259 279 ntBASIC-3.41□□□□□ -2.96
CHD1O14646 AL606534.2-204ENST00000635008 178 ntBASIC-3.41□□□□□ -2.96
CHD1O14646 RNU6-211P-201ENST00000384047 107 ntBASIC-3.42□□□□□ -2.96
CHD1O14646 RNU6-141P-201ENST00000410499 105 ntBASIC-3.42□□□□□ -2.96
CHD1O14646 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.42□□□□□ -2.96
CHD1O14646 MIR5690-201ENST00000583739 73 ntBASIC-3.42□□□□□ -2.96
CHD1O14646 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-3.43□□□□□ -2.96
CHD1O14646 snoU2_19.4-201ENST00000364329 80 ntBASIC-3.43□□□□□ -2.96
CHD1O14646 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.43□□□□□ -2.96
CHD1O14646 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.43□□□□□ -2.96
CHD1O14646 AL132765.2-201ENST00000610812 351 ntBASIC-3.43□□□□□ -2.96
CHD1O14646 DLEU2_1.1-201ENST00000612089 120 ntBASIC-3.43□□□□□ -2.96
CHD1O14646 DLEU2_1.2-201ENST00000614667 120 ntBASIC-3.43□□□□□ -2.96
CHD1O14646 Y_RNA.217-201ENST00000364214 105 ntBASIC-3.44□□□□□ -2.96
CHD1O14646 Y_RNA.641-201ENST00000459414 105 ntBASIC-3.44□□□□□ -2.96
CHD1O14646 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.44□□□□□ -2.96
CHD1O14646 AL121914.1-201ENST00000450188 156 ntBASIC-3.44□□□□□ -2.96
CHD1O14646 RNY4P25-201ENST00000459254 96 ntBASIC-3.44□□□□□ -2.96
Retrieved 100 of 98,524 protein–RNA pairs in 243.5 ms