Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.15□□□□□ -2.59
UBFD1O14562 MIR216B-201ENST00000390186 82 ntBASIC-1.15□□□□□ -2.59
UBFD1O14562 SNORD2-201ENST00000459163 69 ntBASIC-1.15□□□□□ -2.59
UBFD1O14562 RNU6-90P-201ENST00000606352 106 ntBASIC-1.15□□□□□ -2.59
UBFD1O14562 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.16□□□□□ -2.6
UBFD1O14562 RNU6-935P-201ENST00000410371 100 ntBASIC-1.16□□□□□ -2.6
UBFD1O14562 MTND2P23-201ENST00000422990 651 ntBASIC-1.16□□□□□ -2.6
UBFD1O14562 MTATP8P1-201ENST00000467115 207 ntBASIC-1.16□□□□□ -2.6
UBFD1O14562 RNU6-635P-201ENST00000516651 102 ntBASIC-1.16□□□□□ -2.6
UBFD1O14562 AL512310.12-203ENST00000640543 90 ntBASIC-1.16□□□□□ -2.6
UBFD1O14562 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.17□□□□□ -2.6
UBFD1O14562 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.17□□□□□ -2.6
UBFD1O14562 RNU6-431P-201ENST00000383874 107 ntBASIC-1.17□□□□□ -2.6
UBFD1O14562 MIR451A-201ENST00000385059 72 ntBASIC-1.17□□□□□ -2.6
UBFD1O14562 RNU6-466P-201ENST00000391224 103 ntBASIC-1.17□□□□□ -2.6
UBFD1O14562 AL353813.1-201ENST00000440700 253 ntBASIC-1.17□□□□□ -2.6
UBFD1O14562 SNORD74.6-201ENST00000364796 70 ntBASIC-1.18□□□□□ -2.6
UBFD1O14562 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.18□□□□□ -2.6
UBFD1O14562 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.18□□□□□ -2.6
UBFD1O14562 SNORD64-201ENST00000386683 67 ntBASIC-1.18□□□□□ -2.6
UBFD1O14562 RNU6-918P-201ENST00000391219 106 ntBASIC-1.18□□□□□ -2.6
UBFD1O14562 RNU6-592P-201ENST00000411333 103 ntBASIC-1.18□□□□□ -2.6
UBFD1O14562 AC107027.2-201ENST00000512197 115 ntBASIC-1.18□□□□□ -2.6
UBFD1O14562 MIR6773-201ENST00000612812 74 ntBASIC-1.18□□□□□ -2.6
UBFD1O14562 MIR3658-201ENST00000636291 56 ntBASIC-1.18□□□□□ -2.6
UBFD1O14562 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.19□□□□□ -2.6
UBFD1O14562 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.19□□□□□ -2.6
UBFD1O14562 SNORD38.1-201ENST00000363863 68 ntBASIC-1.19□□□□□ -2.6
UBFD1O14562 RNU6-337P-201ENST00000391243 106 ntBASIC-1.19□□□□□ -2.6
UBFD1O14562 RNU2-38P-201ENST00000410856 79 ntBASIC-1.19□□□□□ -2.6
UBFD1O14562 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.19□□□□□ -2.6
UBFD1O14562 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.19□□□□□ -2.6
UBFD1O14562 RNA5SP461-201ENST00000516451 104 ntBASIC-1.19□□□□□ -2.6
UBFD1O14562 RNU6-719P-201ENST00000516671 104 ntBASIC-1.19□□□□□ -2.6
UBFD1O14562 MIR3163-201ENST00000581592 73 ntBASIC-1.19□□□□□ -2.6
UBFD1O14562 MIR4499-201ENST00000584834 69 ntBASIC-1.19□□□□□ -2.6
UBFD1O14562 RNA5SP192-201ENST00000364404 120 ntBASIC-1.2□□□□□ -2.6
UBFD1O14562 AC022028.1-201ENST00000412054 408 ntBASIC-1.2□□□□□ -2.6
UBFD1O14562 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.2□□□□□ -2.6
UBFD1O14562 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.2□□□□□ -2.6
UBFD1O14562 MIR3646-201ENST00000578301 84 ntBASIC-1.2□□□□□ -2.6
UBFD1O14562 U6.104-201ENST00000637979 90 ntBASIC-1.2□□□□□ -2.6
UBFD1O14562 SNORD114-4-201ENST00000363962 75 ntBASIC-1.21□□□□□ -2.6
UBFD1O14562 MIR3115-201ENST00000577915 68 ntBASIC-1.21□□□□□ -2.6
UBFD1O14562 uc_338.19-201ENST00000616808 99 ntBASIC-1.21□□□□□ -2.6
UBFD1O14562 snoR1.1-201ENST00000628177 80 ntBASIC-1.21□□□□□ -2.6
UBFD1O14562 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.22□□□□□ -2.6
UBFD1O14562 SNORD115-23-201ENST00000364461 82 ntBASIC-1.22□□□□□ -2.6
UBFD1O14562 SNORA33.2-201ENST00000365413 134 ntBASIC-1.22□□□□□ -2.6
UBFD1O14562 MIR1207-201ENST00000408249 87 ntBASIC-1.22□□□□□ -2.6
UBFD1O14562 SNORD18.2-201ENST00000459604 70 ntBASIC-1.22□□□□□ -2.6
UBFD1O14562 RNU6-75P-201ENST00000515944 104 ntBASIC-1.22□□□□□ -2.6
UBFD1O14562 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.23□□□□□ -2.61
UBFD1O14562 RNU6-24P-201ENST00000384440 107 ntBASIC-1.23□□□□□ -2.61
UBFD1O14562 MIR147A-201ENST00000385079 72 ntBASIC-1.23□□□□□ -2.61
UBFD1O14562 MIRLET7B-201ENST00000385140 83 ntBASIC-1.23□□□□□ -2.61
UBFD1O14562 RNU6-363P-201ENST00000362895 105 ntBASIC-1.24□□□□□ -2.61
UBFD1O14562 SNORD114-3-201ENST00000364969 75 ntBASIC-1.24□□□□□ -2.61
UBFD1O14562 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.24□□□□□ -2.61
UBFD1O14562 MIR759-201ENST00000390224 91 ntBASIC-1.24□□□□□ -2.61
UBFD1O14562 SNORD37.2-201ENST00000391075 66 ntBASIC-1.24□□□□□ -2.61
UBFD1O14562 U3.27-201ENST00000391237 200 ntBASIC-1.24□□□□□ -2.61
UBFD1O14562 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.24□□□□□ -2.61
UBFD1O14562 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 RNU6-312P-201ENST00000364629 107 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 RNU6-639P-201ENST00000384074 107 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 MIR124-2-201ENST00000385081 109 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 SNORD58.1-201ENST00000391313 66 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 FGF7P7-201ENST00000514120 227 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 AC140658.3-201ENST00000567603 271 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 MIR3121-201ENST00000579680 77 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 MIR3165-201ENST00000579874 75 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 MIR382-201ENST00000637119 76 ntBASIC-1.25□□□□□ -2.61
UBFD1O14562 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.26□□□□□ -2.61
UBFD1O14562 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.26□□□□□ -2.61
UBFD1O14562 RNU6-647P-201ENST00000364243 107 ntBASIC-1.26□□□□□ -2.61
UBFD1O14562 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.26□□□□□ -2.61
UBFD1O14562 MIR548H3-201ENST00000408771 118 ntBASIC-1.26□□□□□ -2.61
UBFD1O14562 MIR365A-201ENST00000362260 87 ntBASIC-1.27□□□□□ -2.61
UBFD1O14562 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.27□□□□□ -2.61
UBFD1O14562 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.27□□□□□ -2.61
UBFD1O14562 MIR548D2-201ENST00000384955 97 ntBASIC-1.27□□□□□ -2.61
UBFD1O14562 RNU6-239P-201ENST00000390990 99 ntBASIC-1.27□□□□□ -2.61
UBFD1O14562 SCARNA18B-201ENST00000458806 135 ntBASIC-1.27□□□□□ -2.61
UBFD1O14562 RNU6-274P-201ENST00000459566 107 ntBASIC-1.27□□□□□ -2.61
UBFD1O14562 RNU7-121P-201ENST00000516604 62 ntBASIC-1.27□□□□□ -2.61
UBFD1O14562 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.27□□□□□ -2.61
UBFD1O14562 SNORD114-17-201ENST00000364699 75 ntBASIC-1.28□□□□□ -2.61
UBFD1O14562 SNORA63.6-201ENST00000364921 119 ntBASIC-1.28□□□□□ -2.61
UBFD1O14562 RN7SKP19-201ENST00000516016 252 ntBASIC-1.28□□□□□ -2.61
UBFD1O14562 RNA5SP470-201ENST00000516463 106 ntBASIC-1.28□□□□□ -2.61
UBFD1O14562 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.28□□□□□ -2.61
UBFD1O14562 AL442128.1-201ENST00000615151 90 ntBASIC-1.28□□□□□ -2.61
UBFD1O14562 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.29□□□□□ -2.62
UBFD1O14562 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.29□□□□□ -2.62
UBFD1O14562 RNU6-990P-201ENST00000364385 104 ntBASIC-1.29□□□□□ -2.62
UBFD1O14562 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.29□□□□□ -2.62
UBFD1O14562 RNU6-409P-201ENST00000384114 104 ntBASIC-1.29□□□□□ -2.62
UBFD1O14562 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms