Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR329-2-201ENST00000385029 84 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 RNU6-887P-201ENST00000410660 100 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 RNU7-161P-201ENST00000517289 62 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 AC103810.7-201ENST00000607821 91 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 AC244669.1-204ENST00000621564 178 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 SNORA36.1-201ENST00000363424 132 ntBASIC0.86□□□□□ -2.27
CCDC85CA6NKD9 Y_RNA.648-201ENST00000459455 110 ntBASIC0.86□□□□□ -2.27
CCDC85CA6NKD9 AL513043.2-201ENST00000573941 143 ntBASIC0.86□□□□□ -2.27
CCDC85CA6NKD9 AC025521.1-201ENST00000621624 286 ntBASIC0.86□□□□□ -2.27
CCDC85CA6NKD9 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
CCDC85CA6NKD9 Y_RNA.348-201ENST00000365403 103 ntBASIC0.85□□□□□ -2.27
CCDC85CA6NKD9 SNORA40.13-201ENST00000516379 120 ntBASIC0.85□□□□□ -2.27
CCDC85CA6NKD9 RNU6-229P-201ENST00000516614 102 ntBASIC0.85□□□□□ -2.27
CCDC85CA6NKD9 RNU6-524P-201ENST00000384270 107 ntBASIC0.84□□□□□ -2.27
CCDC85CA6NKD9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
CCDC85CA6NKD9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
CCDC85CA6NKD9 SNORD58A-201ENST00000383875 65 ntBASIC0.83□□□□□ -2.28
CCDC85CA6NKD9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC85CA6NKD9 SNORA8.2-201ENST00000384372 139 ntBASIC0.82□□□□□ -2.28
CCDC85CA6NKD9 RNU7-61P-201ENST00000515897 61 ntBASIC0.82□□□□□ -2.28
CCDC85CA6NKD9 AC018659.1-201ENST00000551083 169 ntBASIC0.82□□□□□ -2.28
CCDC85CA6NKD9 AC092634.7-201ENST00000621022 103 ntBASIC0.82□□□□□ -2.28
CCDC85CA6NKD9 SNORD116-10-201ENST00000363791 102 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 Y_RNA.221-201ENST00000364248 96 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 RNA5SP517-201ENST00000364724 117 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 SNORD41.1-201ENST00000391000 69 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 RNU6-168P-201ENST00000516189 101 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 RN7SKP12-201ENST00000516275 143 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 RNU6-640P-201ENST00000363693 105 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 RNU6-726P-201ENST00000364680 107 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 RNU6-466P-201ENST00000391224 103 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 RNA5SP268-201ENST00000516828 124 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 MTRNR2L2-201ENST00000604882 87 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 TRDV1-202ENST00000621643 102 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 AC067863.3-201ENST00000624172 122 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 Y_RNA.283-201ENST00000364798 112 ntBASIC0.79□□□□□ -2.28
CCDC85CA6NKD9 SNORD115-44-201ENST00000365391 82 ntBASIC0.79□□□□□ -2.28
CCDC85CA6NKD9 SNORA2A-201ENST00000383885 135 ntBASIC0.79□□□□□ -2.28
CCDC85CA6NKD9 RNU6-905P-201ENST00000384434 107 ntBASIC0.79□□□□□ -2.28
CCDC85CA6NKD9 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
CCDC85CA6NKD9 snoU13.11-201ENST00000459219 104 ntBASIC0.78□□□□□ -2.28
CCDC85CA6NKD9 Y_RNA.677-201ENST00000516401 85 ntBASIC0.78□□□□□ -2.28
CCDC85CA6NKD9 SNORD118-201ENST00000363593 134 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNU6-957P-201ENST00000363652 99 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNA5SP89-201ENST00000410300 108 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 SNORA40.8-201ENST00000411034 126 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNU7-104P-201ENST00000459398 79 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 AC243829.6-201ENST00000612652 106 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 U7.3-201ENST00000616123 62 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNU6-945P-201ENST00000383947 107 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 RNA5SP25-201ENST00000410815 110 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 RNA5SP227-201ENST00000516184 113 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 RNU7-13P-201ENST00000516413 62 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 MIR3920-201ENST00000581751 86 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 MIR7107-201ENST00000611489 80 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 RNA5SP499-201ENST00000363982 119 ntBASIC0.75□□□□□ -2.29
CCDC85CA6NKD9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.75□□□□□ -2.29
CCDC85CA6NKD9 MIR518A1-201ENST00000385068 85 ntBASIC0.75□□□□□ -2.29
CCDC85CA6NKD9 RNU6-75P-201ENST00000515944 104 ntBASIC0.75□□□□□ -2.29
CCDC85CA6NKD9 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
CCDC85CA6NKD9 Y_RNA.290-201ENST00000364879 114 ntBASIC0.74□□□□□ -2.29
CCDC85CA6NKD9 RNU7-85P-201ENST00000458851 63 ntBASIC0.74□□□□□ -2.29
CCDC85CA6NKD9 AL162376.1-201ENST00000624117 175 ntBASIC0.74□□□□□ -2.29
CCDC85CA6NKD9 MIR409-201ENST00000362237 79 ntBASIC0.73□□□□□ -2.29
CCDC85CA6NKD9 Y_RNA.596-201ENST00000410462 109 ntBASIC0.73□□□□□ -2.29
CCDC85CA6NKD9 SNORD71-201ENST00000411292 86 ntBASIC0.73□□□□□ -2.29
CCDC85CA6NKD9 MALAT1.1-201ENST00000618249 95 ntBASIC0.73□□□□□ -2.29
CCDC85CA6NKD9 AL161932.1-201ENST00000437408 146 ntBASIC0.72□□□□□ -2.29
CCDC85CA6NKD9 RNU4-54P-201ENST00000516428 129 ntBASIC0.72□□□□□ -2.29
CCDC85CA6NKD9 AC023932.2-201ENST00000603176 175 ntBASIC0.72□□□□□ -2.29
CCDC85CA6NKD9 U6.100-201ENST00000636230 99 ntBASIC0.72□□□□□ -2.29
CCDC85CA6NKD9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
CCDC85CA6NKD9 SNORD4B-201ENST00000459083 72 ntBASIC0.71□□□□□ -2.3
CCDC85CA6NKD9 RNU7-74P-201ENST00000459104 62 ntBASIC0.7□□□□□ -2.3
CCDC85CA6NKD9 RNU6-863P-201ENST00000515989 104 ntBASIC0.7□□□□□ -2.3
CCDC85CA6NKD9 Z95118.1-201ENST00000421372 247 ntBASIC0.69□□□□□ -2.3
CCDC85CA6NKD9 RNU6-65P-201ENST00000516332 98 ntBASIC0.69□□□□□ -2.3
CCDC85CA6NKD9 MIR4536-1-201ENST00000583537 88 ntBASIC0.69□□□□□ -2.3
CCDC85CA6NKD9 SNORA25.18-201ENST00000607153 114 ntBASIC0.69□□□□□ -2.3
CCDC85CA6NKD9 MIR617-201ENST00000385030 97 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 MIR548L-201ENST00000408303 86 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-519P-201ENST00000410590 108 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-848P-201ENST00000515948 107 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-617P-201ENST00000516147 107 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-473P-201ENST00000516164 107 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-162P-201ENST00000516228 103 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 IGLVI-20-201ENST00000519296 130 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-664P-201ENST00000362381 107 ntBASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 RNA5SP368-201ENST00000364298 116 ntBASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 MIR488-201ENST00000365739 83 ntBASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 SNORD101-201ENST00000384027 73 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 268.2 ms