Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SNORA7.5-201ENST00000410672 110 ntBASIC-1.13□□□□□ -2.59
RBFOX3A6NFN3 MIR4464-201ENST00000580818 92 ntBASIC-1.13□□□□□ -2.59
RBFOX3A6NFN3 AL137067.1-201ENST00000615933 120 ntBASIC-1.13□□□□□ -2.59
RBFOX3A6NFN3 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 RNU6-713P-201ENST00000384761 107 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 U3.27-201ENST00000391237 200 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 RNU6-75P-201ENST00000515944 104 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 YWHAEP3-201ENST00000582767 121 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 MIR3149-201ENST00000584629 83 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 AC090617.8-201ENST00000623339 167 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 AL512310.12-203ENST00000640543 90 ntBASIC-1.14□□□□□ -2.59
RBFOX3A6NFN3 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.15□□□□□ -2.59
RBFOX3A6NFN3 RNY1P11-201ENST00000363759 113 ntBASIC-1.15□□□□□ -2.59
RBFOX3A6NFN3 SNORD38.1-201ENST00000363863 68 ntBASIC-1.15□□□□□ -2.59
RBFOX3A6NFN3 RNU6-990P-201ENST00000364385 104 ntBASIC-1.15□□□□□ -2.59
RBFOX3A6NFN3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.15□□□□□ -2.59
RBFOX3A6NFN3 FGF7P7-201ENST00000514120 227 ntBASIC-1.15□□□□□ -2.59
RBFOX3A6NFN3 AC068339.1-201ENST00000526965 141 ntBASIC-1.15□□□□□ -2.59
RBFOX3A6NFN3 AC134503.1-201ENST00000633048 54 ntBASIC-1.15□□□□□ -2.59
RBFOX3A6NFN3 AC021753.1-201ENST00000635724 168 ntBASIC-1.15□□□□□ -2.59
RBFOX3A6NFN3 MTND4P29-201ENST00000503122 1372 ntBASIC-1.16□□□□□ -2.59
RBFOX3A6NFN3 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.16□□□□□ -2.6
RBFOX3A6NFN3 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.16□□□□□ -2.6
RBFOX3A6NFN3 AC022028.1-201ENST00000412054 408 ntBASIC-1.16□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.16□□□□□ -2.6
RBFOX3A6NFN3 MIR4308-201ENST00000580634 81 ntBASIC-1.16□□□□□ -2.6
RBFOX3A6NFN3 AL353803.5-201ENST00000599815 141 ntBASIC-1.16□□□□□ -2.6
RBFOX3A6NFN3 MIR6818-201ENST00000621576 65 ntBASIC-1.16□□□□□ -2.6
RBFOX3A6NFN3 U6.106-201ENST00000636360 105 ntBASIC-1.16□□□□□ -2.6
RBFOX3A6NFN3 U6.104-201ENST00000637979 90 ntBASIC-1.16□□□□□ -2.6
RBFOX3A6NFN3 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 MIR527-201ENST00000385244 85 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 SNORA75.5-201ENST00000391291 81 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 MIR3163-201ENST00000581592 73 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 AL445584.3-201ENST00000617173 78 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 MIR6888-201ENST00000621977 67 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 AL160413.1-201ENST00000622780 310 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 U6.96-201ENST00000636425 70 ntBASIC-1.17□□□□□ -2.6
RBFOX3A6NFN3 RNY4P28-201ENST00000365281 93 ntBASIC-1.18□□□□□ -2.6
RBFOX3A6NFN3 MIR8485-201ENST00000401372 91 ntBASIC-1.18□□□□□ -2.6
RBFOX3A6NFN3 MIR548P-201ENST00000408336 84 ntBASIC-1.18□□□□□ -2.6
RBFOX3A6NFN3 RNU6-985P-201ENST00000410182 104 ntBASIC-1.18□□□□□ -2.6
RBFOX3A6NFN3 HLA-S-202ENST00000425174 53 ntBASIC-1.18□□□□□ -2.6
RBFOX3A6NFN3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.18□□□□□ -2.6
RBFOX3A6NFN3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.18□□□□□ -2.6
RBFOX3A6NFN3 AC021146.9-201ENST00000512503 156 ntBASIC-1.18□□□□□ -2.6
RBFOX3A6NFN3 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.18□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.18□□□□□ -2.6
RBFOX3A6NFN3 RNU6-495P-201ENST00000362995 107 ntBASIC-1.19□□□□□ -2.6
RBFOX3A6NFN3 SNORD18B-201ENST00000365659 72 ntBASIC-1.19□□□□□ -2.6
RBFOX3A6NFN3 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.19□□□□□ -2.6
RBFOX3A6NFN3 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.19□□□□□ -2.6
RBFOX3A6NFN3 MIR548S-201ENST00000581352 82 ntBASIC-1.19□□□□□ -2.6
RBFOX3A6NFN3 RNU6-746P-201ENST00000384112 109 ntBASIC-1.2□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.2□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.2□□□□□ -2.6
RBFOX3A6NFN3 MIR759-201ENST00000390224 91 ntBASIC-1.2□□□□□ -2.6
RBFOX3A6NFN3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.2□□□□□ -2.6
RBFOX3A6NFN3 MIR5591-201ENST00000578248 65 ntBASIC-1.2□□□□□ -2.6
RBFOX3A6NFN3 MIR4770-201ENST00000579149 58 ntBASIC-1.2□□□□□ -2.6
RBFOX3A6NFN3 MIR6844-201ENST00000637122 62 ntBASIC-1.2□□□□□ -2.6
RBFOX3A6NFN3 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.21□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.21□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.21□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.21□□□□□ -2.6
RBFOX3A6NFN3 MT-TW-201ENST00000387382 68 ntBASIC-1.21□□□□□ -2.6
RBFOX3A6NFN3 MIR1302-6-201ENST00000408466 90 ntBASIC-1.21□□□□□ -2.6
RBFOX3A6NFN3 MIR3140-201ENST00000583685 90 ntBASIC-1.21□□□□□ -2.6
RBFOX3A6NFN3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.21□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.22□□□□□ -2.6
RBFOX3A6NFN3 RNU6-363P-201ENST00000362895 105 ntBASIC-1.22□□□□□ -2.6
RBFOX3A6NFN3 MIR889-201ENST00000401280 79 ntBASIC-1.22□□□□□ -2.6
RBFOX3A6NFN3 SNORD127-201ENST00000458892 86 ntBASIC-1.22□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.22□□□□□ -2.6
RBFOX3A6NFN3 SNORD63.1-201ENST00000516178 80 ntBASIC-1.22□□□□□ -2.6
RBFOX3A6NFN3 MIR6502-201ENST00000617296 76 ntBASIC-1.22□□□□□ -2.6
RBFOX3A6NFN3 MIR8062-201ENST00000621515 85 ntBASIC-1.22□□□□□ -2.6
RBFOX3A6NFN3 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.23□□□□□ -2.61
RBFOX3A6NFN3 SNORA26.4-201ENST00000391188 123 ntBASIC-1.23□□□□□ -2.61
RBFOX3A6NFN3 AC107027.2-201ENST00000512197 115 ntBASIC-1.23□□□□□ -2.61
RBFOX3A6NFN3 RNU6-65P-201ENST00000516332 98 ntBASIC-1.23□□□□□ -2.61
RBFOX3A6NFN3 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.23□□□□□ -2.61
RBFOX3A6NFN3 MIR3646-201ENST00000578301 84 ntBASIC-1.23□□□□□ -2.61
RBFOX3A6NFN3 MIR4536-1-201ENST00000583537 88 ntBASIC-1.23□□□□□ -2.61
RBFOX3A6NFN3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.23□□□□□ -2.61
RBFOX3A6NFN3 AC025521.1-201ENST00000621624 286 ntBASIC-1.23□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.24□□□□□ -2.61
RBFOX3A6NFN3 SNORD115-33-201ENST00000363723 82 ntBASIC-1.24□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.24□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.24□□□□□ -2.61
RBFOX3A6NFN3 RNU6-132P-201ENST00000383863 107 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 230.8 ms