Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.54□□□□□ -2.32
MBD3L4A6NDZ8 RNA5SP89-201ENST00000410300 108 ntBASIC0.54□□□□□ -2.32
MBD3L4A6NDZ8 AL161932.1-201ENST00000437408 146 ntBASIC0.54□□□□□ -2.32
MBD3L4A6NDZ8 snoU13.11-201ENST00000459219 104 ntBASIC0.54□□□□□ -2.32
MBD3L4A6NDZ8 RNU6-162P-201ENST00000516228 103 ntBASIC0.54□□□□□ -2.32
MBD3L4A6NDZ8 RNU7-13P-201ENST00000516413 62 ntBASIC0.54□□□□□ -2.32
MBD3L4A6NDZ8 AC243829.3-201ENST00000622177 108 ntBASIC0.54□□□□□ -2.32
MBD3L4A6NDZ8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
MBD3L4A6NDZ8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
MBD3L4A6NDZ8 SNORD58A-201ENST00000383875 65 ntBASIC0.53□□□□□ -2.32
MBD3L4A6NDZ8 RNU6-466P-201ENST00000391224 103 ntBASIC0.53□□□□□ -2.32
MBD3L4A6NDZ8 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
MBD3L4A6NDZ8 SNORA68.3-201ENST00000515906 83 ntBASIC0.53□□□□□ -2.32
MBD3L4A6NDZ8 Y_RNA.677-201ENST00000516401 85 ntBASIC0.53□□□□□ -2.32
MBD3L4A6NDZ8 U7.3-201ENST00000616123 62 ntBASIC0.53□□□□□ -2.32
MBD3L4A6NDZ8 TRDV1-202ENST00000621643 102 ntBASIC0.53□□□□□ -2.32
MBD3L4A6NDZ8 MIR2052-201ENST00000636055 55 ntBASIC0.53□□□□□ -2.32
MBD3L4A6NDZ8 RNU6-957P-201ENST00000363652 99 ntBASIC0.52□□□□□ -2.33
MBD3L4A6NDZ8 RNU6-640P-201ENST00000363693 105 ntBASIC0.52□□□□□ -2.33
MBD3L4A6NDZ8 RNU6-905P-201ENST00000384434 107 ntBASIC0.52□□□□□ -2.33
MBD3L4A6NDZ8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.52□□□□□ -2.33
MBD3L4A6NDZ8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.52□□□□□ -2.33
MBD3L4A6NDZ8 MIR8087-201ENST00000612745 78 ntBASIC0.52□□□□□ -2.33
MBD3L4A6NDZ8 RNU6-726P-201ENST00000364680 107 ntBASIC0.51□□□□□ -2.33
MBD3L4A6NDZ8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.51□□□□□ -2.33
MBD3L4A6NDZ8 Y_RNA.648-201ENST00000459455 110 ntBASIC0.51□□□□□ -2.33
MBD3L4A6NDZ8 RNU6-1265P-201ENST00000516342 103 ntBASIC0.51□□□□□ -2.33
MBD3L4A6NDZ8 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
MBD3L4A6NDZ8 Y_RNA.283-201ENST00000364798 112 ntBASIC0.5□□□□□ -2.33
MBD3L4A6NDZ8 Y_RNA.290-201ENST00000364879 114 ntBASIC0.5□□□□□ -2.33
MBD3L4A6NDZ8 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
MBD3L4A6NDZ8 AL109933.3-201ENST00000619095 188 ntBASIC0.5□□□□□ -2.33
MBD3L4A6NDZ8 MIR330-201ENST00000362196 94 ntBASIC0.49□□□□□ -2.33
MBD3L4A6NDZ8 SNORD116-10-201ENST00000363791 102 ntBASIC0.49□□□□□ -2.33
MBD3L4A6NDZ8 Y_RNA.190-201ENST00000363964 101 ntBASIC0.49□□□□□ -2.33
MBD3L4A6NDZ8 AC069271.1-201ENST00000445577 156 ntBASIC0.49□□□□□ -2.33
MBD3L4A6NDZ8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.49□□□□□ -2.33
MBD3L4A6NDZ8 MALAT1.1-201ENST00000618249 95 ntBASIC0.49□□□□□ -2.33
MBD3L4A6NDZ8 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
MBD3L4A6NDZ8 U6.100-201ENST00000636230 99 ntBASIC0.49□□□□□ -2.33
MBD3L4A6NDZ8 MIR488-201ENST00000365739 83 ntBASIC0.48□□□□□ -2.33
MBD3L4A6NDZ8 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
MBD3L4A6NDZ8 RNU7-85P-201ENST00000458851 63 ntBASIC0.48□□□□□ -2.33
MBD3L4A6NDZ8 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
MBD3L4A6NDZ8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
MBD3L4A6NDZ8 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
MBD3L4A6NDZ8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.47□□□□□ -2.33
MBD3L4A6NDZ8 SNORD41.1-201ENST00000391000 69 ntBASIC0.47□□□□□ -2.33
MBD3L4A6NDZ8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.47□□□□□ -2.33
MBD3L4A6NDZ8 RNU2-59P-201ENST00000410482 191 ntBASIC0.47□□□□□ -2.33
MBD3L4A6NDZ8 RNU6-519P-201ENST00000410590 108 ntBASIC0.47□□□□□ -2.33
MBD3L4A6NDZ8 RNU6-75P-201ENST00000515944 104 ntBASIC0.47□□□□□ -2.33
MBD3L4A6NDZ8 MIR3920-201ENST00000581751 86 ntBASIC0.47□□□□□ -2.33
MBD3L4A6NDZ8 SNORD115-44-201ENST00000365391 82 ntBASIC0.46□□□□□ -2.34
MBD3L4A6NDZ8 MIR1197-201ENST00000408818 88 ntBASIC0.46□□□□□ -2.34
MBD3L4A6NDZ8 SNORD4B-201ENST00000459083 72 ntBASIC0.46□□□□□ -2.34
MBD3L4A6NDZ8 RNU6-65P-201ENST00000516332 98 ntBASIC0.46□□□□□ -2.34
MBD3L4A6NDZ8 MIR4536-1-201ENST00000583537 88 ntBASIC0.46□□□□□ -2.34
MBD3L4A6NDZ8 Y_RNA.596-201ENST00000410462 109 ntBASIC0.45□□□□□ -2.34
MBD3L4A6NDZ8 Y_RNA.609-201ENST00000410669 89 ntBASIC0.45□□□□□ -2.34
MBD3L4A6NDZ8 AC026421.1-201ENST00000519101 163 ntBASIC0.45□□□□□ -2.34
MBD3L4A6NDZ8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
MBD3L4A6NDZ8 MIR103A1-201ENST00000362165 78 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 RNA5SP257-201ENST00000363023 116 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 SNORD44.1-201ENST00000363202 61 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 SNORD101-201ENST00000384027 73 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 RNY1P7-201ENST00000384743 110 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 RNU6-269P-201ENST00000391077 97 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 RNU7-74P-201ENST00000459104 62 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 RNU6-287P-201ENST00000516230 98 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 Y_RNA.681-201ENST00000516445 113 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 MIR4752-201ENST00000579672 72 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 MIR548AG2-201ENST00000581228 64 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 AL162376.1-201ENST00000624117 175 ntBASIC0.44□□□□□ -2.34
MBD3L4A6NDZ8 MIR4696-201ENST00000581431 70 ntBASIC0.43□□□□□ -2.34
MBD3L4A6NDZ8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.43□□□□□ -2.34
MBD3L4A6NDZ8 RNU6-664P-201ENST00000362381 107 ntBASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 Y_RNA.68-201ENST00000362881 102 ntBASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 Y_RNA.207-201ENST00000364142 106 ntBASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 Y_RNA.220-201ENST00000364244 109 ntBASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 RNU6-1131P-201ENST00000364955 107 ntBASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 RNY4P30-201ENST00000410216 95 ntBASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 MTATP6P29-201ENST00000415057 132 ntBASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 RNU6-863P-201ENST00000515989 104 ntBASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
MBD3L4A6NDZ8 MIRLET7F1-201ENST00000362202 87 ntBASIC0.41□□□□□ -2.34
MBD3L4A6NDZ8 RNU6-509P-201ENST00000363519 107 ntBASIC0.41□□□□□ -2.34
MBD3L4A6NDZ8 Y_RNA.178-201ENST00000363832 102 ntBASIC0.41□□□□□ -2.34
MBD3L4A6NDZ8 RNU6-132P-201ENST00000383863 107 ntBASIC0.41□□□□□ -2.34
MBD3L4A6NDZ8 RNU6-49P-201ENST00000384256 107 ntBASIC0.41□□□□□ -2.34
MBD3L4A6NDZ8 MIR2113-201ENST00000459007 91 ntBASIC0.41□□□□□ -2.34
MBD3L4A6NDZ8 AC073869.9-201ENST00000641610 120 ntBASIC0.41□□□□□ -2.34
MBD3L4A6NDZ8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
MBD3L4A6NDZ8 MIR617-201ENST00000385030 97 ntBASIC0.4□□□□□ -2.35
MBD3L4A6NDZ8 MIR519E-201ENST00000385075 84 ntBASIC0.4□□□□□ -2.35
MBD3L4A6NDZ8 RNU7-129P-201ENST00000516128 62 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms