Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 MIR1302-11-201ENST00000408051 138 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 MIR1302-9-201ENST00000408365 138 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 MIR1302-10-201ENST00000408734 138 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 RNU6-415P-201ENST00000516252 97 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 RNU6-65P-201ENST00000516332 98 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 MIR4536-1-201ENST00000583537 88 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 MIR1302-2-201ENST00000607096 138 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.3□□□□□ -2.78
TCRBV3S1A0A5B6 RNU6-132P-201ENST00000383863 107 ntBASIC-2.31□□□□□ -2.78
TCRBV3S1A0A5B6 MIR519A2-201ENST00000384990 87 ntBASIC-2.31□□□□□ -2.78
TCRBV3S1A0A5B6 RNU6-976P-201ENST00000516086 111 ntBASIC-2.31□□□□□ -2.78
TCRBV3S1A0A5B6 RNA5SP147-201ENST00000516493 109 ntBASIC-2.31□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.32□□□□□ -2.78
TCRBV3S1A0A5B6 SNORA63.7-201ENST00000365579 123 ntBASIC-2.32□□□□□ -2.78
TCRBV3S1A0A5B6 MIR487B-201ENST00000385021 84 ntBASIC-2.32□□□□□ -2.78
TCRBV3S1A0A5B6 Z83846.1-201ENST00000446798 265 ntBASIC-2.32□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.32□□□□□ -2.78
TCRBV3S1A0A5B6 AC080013.6-201ENST00000606185 215 ntBASIC-2.32□□□□□ -2.78
TCRBV3S1A0A5B6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.32□□□□□ -2.78
TCRBV3S1A0A5B6 AL137067.1-201ENST00000615933 120 ntBASIC-2.32□□□□□ -2.78
TCRBV3S1A0A5B6 RNU6-79P-201ENST00000362511 107 ntBASIC-2.33□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.33□□□□□ -2.78
TCRBV3S1A0A5B6 RNU7-85P-201ENST00000458851 63 ntBASIC-2.33□□□□□ -2.78
TCRBV3S1A0A5B6 AC113139.1-201ENST00000605049 239 ntBASIC-2.33□□□□□ -2.78
TCRBV3S1A0A5B6 RNY4P6-201ENST00000363667 96 ntBASIC-2.34□□□□□ -2.78
TCRBV3S1A0A5B6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.34□□□□□ -2.78
TCRBV3S1A0A5B6 AC018880.2-201ENST00000414265 201 ntBASIC-2.34□□□□□ -2.78
TCRBV3S1A0A5B6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-2.34□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.34□□□□□ -2.78
TCRBV3S1A0A5B6 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.34□□□□□ -2.78
TCRBV3S1A0A5B6 AL132765.2-201ENST00000610812 351 ntBASIC-2.34□□□□□ -2.78
TCRBV3S1A0A5B6 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 SNORD114-3-201ENST00000364969 75 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 SNORD50.2-201ENST00000365465 70 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 MIR4282-201ENST00000583613 67 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 AC002553.4-201ENST00000616896 331 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 AC025521.1-201ENST00000621624 286 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 AC021753.1-201ENST00000635724 168 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 MIR3974-201ENST00000637126 96 ntBASIC-2.35□□□□□ -2.79
TCRBV3S1A0A5B6 MIR335-201ENST00000362173 94 ntBASIC-2.36□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-309P-201ENST00000364573 106 ntBASIC-2.36□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-818P-201ENST00000364837 108 ntBASIC-2.36□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.36□□□□□ -2.79
TCRBV3S1A0A5B6 MTND1P29-201ENST00000448112 647 ntBASIC-2.36□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.36□□□□□ -2.79
TCRBV3S1A0A5B6 MIR3163-201ENST00000581592 73 ntBASIC-2.36□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.37□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-228P-201ENST00000362700 106 ntBASIC-2.37□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-363P-201ENST00000362895 105 ntBASIC-2.37□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.37□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-382P-201ENST00000365181 106 ntBASIC-2.37□□□□□ -2.79
TCRBV3S1A0A5B6 MIR759-201ENST00000390224 91 ntBASIC-2.37□□□□□ -2.79
TCRBV3S1A0A5B6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-2.37□□□□□ -2.79
TCRBV3S1A0A5B6 RNU7-88P-201ENST00000458752 63 ntBASIC-2.37□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.717-201ENST00000517106 92 ntBASIC-2.37□□□□□ -2.79
TCRBV3S1A0A5B6 U7.5-201ENST00000517224 61 ntBASIC-2.37□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.38□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.38□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.38□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-768P-201ENST00000384683 107 ntBASIC-2.38□□□□□ -2.79
TCRBV3S1A0A5B6 MIR203A-201ENST00000384836 110 ntBASIC-2.38□□□□□ -2.79
TCRBV3S1A0A5B6 SNORA19.1-201ENST00000410656 129 ntBASIC-2.38□□□□□ -2.79
TCRBV3S1A0A5B6 RNU7-152P-201ENST00000458982 64 ntBASIC-2.38□□□□□ -2.79
TCRBV3S1A0A5B6 AC069439.1-201ENST00000494739 167 ntBASIC-2.38□□□□□ -2.79
TCRBV3S1A0A5B6 MIR548AG1-201ENST00000579932 66 ntBASIC-2.38□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.51-201ENST00000362725 102 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-246P-201ENST00000384702 107 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 ELOCP20-201ENST00000422460 345 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 AC108019.1-201ENST00000512540 175 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 MIR3064-201ENST00000581130 66 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 MIR3657-201ENST00000584818 117 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 AC006254.2-201ENST00000603259 279 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 AL627230.5-201ENST00000619807 58 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 U6.106-201ENST00000636360 105 ntBASIC-2.39□□□□□ -2.79
TCRBV3S1A0A5B6 RNY4P27-201ENST00000363341 96 ntBASIC-2.4□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-770P-201ENST00000363929 105 ntBASIC-2.4□□□□□ -2.79
TCRBV3S1A0A5B6 RNU6-806P-201ENST00000365147 105 ntBASIC-2.4□□□□□ -2.79
TCRBV3S1A0A5B6 SNORD116-1-201ENST00000384335 95 ntBASIC-2.4□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.4□□□□□ -2.79
TCRBV3S1A0A5B6 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.4□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms