Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
IGKV3D-20A0A0C4DH25 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
IGKV3D-20A0A0C4DH25 MIR548U-201ENST00000390728 81 ntBASIC0.67□□□□□ -2.3
IGKV3D-20A0A0C4DH25 SNORD77.2-201ENST00000391045 68 ntBASIC0.67□□□□□ -2.3
IGKV3D-20A0A0C4DH25 AC244098.3-201ENST00000424803 96 ntBASIC0.67□□□□□ -2.3
IGKV3D-20A0A0C4DH25 FGF7P7-201ENST00000514120 227 ntBASIC0.67□□□□□ -2.3
IGKV3D-20A0A0C4DH25 RNA5SP255-201ENST00000516370 107 ntBASIC0.67□□□□□ -2.3
IGKV3D-20A0A0C4DH25 RNU6-1187P-201ENST00000364771 110 ntBASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 RNU6-1296P-201ENST00000383879 107 ntBASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 SNORD28-201ENST00000384706 75 ntBASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 Y_RNA.565-201ENST00000384719 101 ntBASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 MIR519E-201ENST00000385075 84 ntBASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 RNU6-935P-201ENST00000410371 100 ntBASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 RNU7-104P-201ENST00000459398 79 ntBASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 MIR3612-201ENST00000579753 87 ntBASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 MIR4661-201ENST00000582720 75 ntBASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 AC244669.1-204ENST00000621564 178 ntBASIC0.66□□□□□ -2.3
IGKV3D-20A0A0C4DH25 Y_RNA.239-201ENST00000364444 113 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR942-201ENST00000401111 86 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC093423.1-201ENST00000440817 142 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 U7.7-201ENST00000459276 60 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RPL39P28-201ENST00000465655 155 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNA5SP47-201ENST00000517230 109 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 SNORA40.17-201ENST00000517256 115 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR3678-201ENST00000578455 94 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.65□□□□□ -2.31
IGKV3D-20A0A0C4DH25 Y_RNA.12-201ENST00000362393 112 ntBASIC0.64□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-726P-201ENST00000364680 107 ntBASIC0.64□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-154P-201ENST00000384306 106 ntBASIC0.64□□□□□ -2.31
IGKV3D-20A0A0C4DH25 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
IGKV3D-20A0A0C4DH25 SNORD42B-201ENST00000458893 67 ntBASIC0.64□□□□□ -2.31
IGKV3D-20A0A0C4DH25 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.64□□□□□ -2.31
IGKV3D-20A0A0C4DH25 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.64□□□□□ -2.31
IGKV3D-20A0A0C4DH25 Y_RNA.174-201ENST00000363781 105 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 SNORD114-2-201ENST00000363953 78 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-340P-201ENST00000364005 107 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 Y_RNA.371-201ENST00000365591 113 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 SNORD41.1-201ENST00000391000 69 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 snoU13.23-201ENST00000458863 104 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-687P-201ENST00000516443 89 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-1015P-201ENST00000517121 99 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC015712.3-201ENST00000559380 164 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 U6.81-201ENST00000612550 106 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AL353997.5-201ENST00000618886 171 ntBASIC0.63□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR18A-201ENST00000362310 71 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-382P-201ENST00000365181 106 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-54P-201ENST00000365563 107 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR200A-201ENST00000384875 90 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR532-201ENST00000385025 91 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 Y_RNA.606-201ENST00000410579 103 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC067940.1-201ENST00000458411 300 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC139453.2-201ENST00000487255 133 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC108210.2-201ENST00000503681 201 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-351P-201ENST00000516097 100 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU7-13P-201ENST00000516413 62 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR4639-201ENST00000584938 69 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU1-29P-201ENST00000606574 126 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR378A-201ENST00000362177 66 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-1094P-201ENST00000362416 104 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNA5SP432-201ENST00000362480 116 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 Y_RNA.36-201ENST00000362602 112 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-716P-201ENST00000365621 103 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 FABP5P4-201ENST00000437203 171 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 Y_RNA.660-201ENST00000516002 120 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-303P-201ENST00000517091 106 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 NAMPTP3-201ENST00000569273 224 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 YWHAEP2-201ENST00000580066 112 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 YWHAEP3-201ENST00000582767 121 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 U7.4-201ENST00000614961 63 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR6828-201ENST00000636181 60 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR4662A-201ENST00000637499 67 ntBASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
IGKV3D-20A0A0C4DH25 SNORD114-24-201ENST00000365029 72 ntBASIC0.6□□□□□ -2.31
IGKV3D-20A0A0C4DH25 SNORD115-31-201ENST00000365318 82 ntBASIC0.6□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR617-201ENST00000385030 97 ntBASIC0.6□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-1177P-201ENST00000391058 104 ntBASIC0.6□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-269P-201ENST00000391077 97 ntBASIC0.6□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR4698-201ENST00000577795 80 ntBASIC0.6□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC211469.2-201ENST00000605461 205 ntBASIC0.6□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR548O2-201ENST00000616090 70 ntBASIC0.6□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR337-201ENST00000362281 93 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNU6-495P-201ENST00000362995 107 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNA5SP117-201ENST00000365294 118 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 SNORD115-44-201ENST00000365391 82 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC097510.1-201ENST00000510945 133 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 RNA5SP94-201ENST00000516917 108 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 MIR4653-201ENST00000585107 83 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AL353765.1-201ENST00000605514 183 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 210.9 ms