Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL157398.1-201ENST00000452981 186 ntBASIC2.39□□□□□ -2.03
VPS9D1Q9Y2B5 RNU7-104P-201ENST00000459398 79 ntBASIC2.39□□□□□ -2.03
VPS9D1Q9Y2B5 SNORA31.14-201ENST00000516728 116 ntBASIC2.39□□□□□ -2.03
VPS9D1Q9Y2B5 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.39□□□□□ -2.03
VPS9D1Q9Y2B5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS9D1Q9Y2B5 RNA5SP276-201ENST00000362580 94 ntBASIC2.38□□□□□ -2.03
VPS9D1Q9Y2B5 Y_RNA.250-201ENST00000364542 110 ntBASIC2.38□□□□□ -2.03
VPS9D1Q9Y2B5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
VPS9D1Q9Y2B5 AC018659.1-201ENST00000551083 169 ntBASIC2.38□□□□□ -2.03
VPS9D1Q9Y2B5 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
VPS9D1Q9Y2B5 MIR8063-201ENST00000621930 81 ntBASIC2.38□□□□□ -2.03
VPS9D1Q9Y2B5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS9D1Q9Y2B5 Y_RNA.32-201ENST00000362589 110 ntBASIC2.37□□□□□ -2.03
VPS9D1Q9Y2B5 Y_RNA.174-201ENST00000363781 105 ntBASIC2.37□□□□□ -2.03
VPS9D1Q9Y2B5 MIR517B-201ENST00000385102 67 ntBASIC2.37□□□□□ -2.03
VPS9D1Q9Y2B5 MIR524-201ENST00000385242 87 ntBASIC2.37□□□□□ -2.03
VPS9D1Q9Y2B5 RNA5SP148-201ENST00000516527 94 ntBASIC2.37□□□□□ -2.03
VPS9D1Q9Y2B5 AC106800.4-201ENST00000614905 153 ntBASIC2.37□□□□□ -2.03
VPS9D1Q9Y2B5 uc_338.16-201ENST00000621804 95 ntBASIC2.37□□□□□ -2.03
VPS9D1Q9Y2B5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS9D1Q9Y2B5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
VPS9D1Q9Y2B5 RNU1-52P-201ENST00000384190 164 ntBASIC2.36□□□□□ -2.03
VPS9D1Q9Y2B5 AC067863.3-201ENST00000624172 122 ntBASIC2.36□□□□□ -2.03
VPS9D1Q9Y2B5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS9D1Q9Y2B5 RNU6-698P-201ENST00000363523 107 ntBASIC2.35□□□□□ -2.03
VPS9D1Q9Y2B5 RNU6-34P-201ENST00000364874 107 ntBASIC2.35□□□□□ -2.03
VPS9D1Q9Y2B5 MIR521-2-201ENST00000384818 87 ntBASIC2.35□□□□□ -2.03
VPS9D1Q9Y2B5 MIR144-201ENST00000384886 86 ntBASIC2.35□□□□□ -2.03
VPS9D1Q9Y2B5 AC026436.1-201ENST00000510537 270 ntBASIC2.35□□□□□ -2.03
VPS9D1Q9Y2B5 MIR4804-201ENST00000581683 73 ntBASIC2.35□□□□□ -2.03
VPS9D1Q9Y2B5 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
VPS9D1Q9Y2B5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS9D1Q9Y2B5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS9D1Q9Y2B5 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
VPS9D1Q9Y2B5 RNU1-119P-201ENST00000391122 165 ntBASIC2.34□□□□□ -2.03
VPS9D1Q9Y2B5 RNU7-74P-201ENST00000459104 62 ntBASIC2.34□□□□□ -2.03
VPS9D1Q9Y2B5 RNU7-119P-201ENST00000459279 63 ntBASIC2.34□□□□□ -2.03
VPS9D1Q9Y2B5 AC008413.1-201ENST00000511864 177 ntBASIC2.34□□□□□ -2.03
VPS9D1Q9Y2B5 RNU6-980P-201ENST00000516925 103 ntBASIC2.34□□□□□ -2.03
VPS9D1Q9Y2B5 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
VPS9D1Q9Y2B5 ZNF355P-201ENST00000427301 3216 ntBASIC2.34□□□□□ -2.04
VPS9D1Q9Y2B5 MIR1261-201ENST00000408659 82 ntBASIC2.33□□□□□ -2.04
VPS9D1Q9Y2B5 RNU7-56P-201ENST00000458744 62 ntBASIC2.33□□□□□ -2.04
VPS9D1Q9Y2B5 RNU1-123P-201ENST00000458950 160 ntBASIC2.33□□□□□ -2.04
VPS9D1Q9Y2B5 RNU6-165P-201ENST00000517170 99 ntBASIC2.33□□□□□ -2.04
VPS9D1Q9Y2B5 MIR4435-1-201ENST00000582552 80 ntBASIC2.33□□□□□ -2.04
VPS9D1Q9Y2B5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS9D1Q9Y2B5 AL359821.1-201ENST00000605519 182 ntBASIC2.33□□□□□ -2.04
VPS9D1Q9Y2B5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
VPS9D1Q9Y2B5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS9D1Q9Y2B5 RNA5SP289-201ENST00000362332 137 ntBASIC2.32□□□□□ -2.04
VPS9D1Q9Y2B5 SNORA75.2-201ENST00000391138 150 ntBASIC2.32□□□□□ -2.04
VPS9D1Q9Y2B5 SNORA75.3-201ENST00000391231 150 ntBASIC2.32□□□□□ -2.04
VPS9D1Q9Y2B5 RNU7-174P-201ENST00000516248 59 ntBASIC2.32□□□□□ -2.04
VPS9D1Q9Y2B5 AC023827.1-201ENST00000569247 97 ntBASIC2.32□□□□□ -2.04
VPS9D1Q9Y2B5 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.32□□□□□ -2.04
VPS9D1Q9Y2B5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS9D1Q9Y2B5 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
VPS9D1Q9Y2B5 RNU6-1065P-201ENST00000384513 106 ntBASIC2.31□□□□□ -2.04
VPS9D1Q9Y2B5 RNA5SP508-201ENST00000411327 119 ntBASIC2.31□□□□□ -2.04
VPS9D1Q9Y2B5 AC019176.1-201ENST00000518519 225 ntBASIC2.31□□□□□ -2.04
VPS9D1Q9Y2B5 AL773524.1-201ENST00000614065 229 ntBASIC2.31□□□□□ -2.04
VPS9D1Q9Y2B5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS9D1Q9Y2B5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS9D1Q9Y2B5 SNORD114-4-201ENST00000363962 75 ntBASIC2.3□□□□□ -2.04
VPS9D1Q9Y2B5 MT-TY-201ENST00000387409 66 ntBASIC2.3□□□□□ -2.04
VPS9D1Q9Y2B5 AC079140.2-201ENST00000506193 142 ntBASIC2.3□□□□□ -2.04
VPS9D1Q9Y2B5 AC021146.9-201ENST00000512503 156 ntBASIC2.3□□□□□ -2.04
VPS9D1Q9Y2B5 AL157834.3-201ENST00000615543 103 ntBASIC2.3□□□□□ -2.04
VPS9D1Q9Y2B5 U4.4-201ENST00000620626 117 ntBASIC2.3□□□□□ -2.04
VPS9D1Q9Y2B5 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
VPS9D1Q9Y2B5 MIR302D-201ENST00000362275 68 ntBASIC2.29□□□□□ -2.04
VPS9D1Q9Y2B5 SNORD33-201ENST00000362761 85 ntBASIC2.29□□□□□ -2.04
VPS9D1Q9Y2B5 RNU6-35P-201ENST00000384530 107 ntBASIC2.29□□□□□ -2.04
VPS9D1Q9Y2B5 AC048334.1-201ENST00000477975 159 ntBASIC2.29□□□□□ -2.04
VPS9D1Q9Y2B5 MIR5694-201ENST00000581190 76 ntBASIC2.29□□□□□ -2.04
VPS9D1Q9Y2B5 AC245884.12-201ENST00000615364 59 ntBASIC2.29□□□□□ -2.04
VPS9D1Q9Y2B5 U2.7-201ENST00000619197 100 ntBASIC2.29□□□□□ -2.04
VPS9D1Q9Y2B5 SNORD1A-201ENST00000364968 72 ntBASIC2.28□□□□□ -2.04
VPS9D1Q9Y2B5 RNU6-930P-201ENST00000390938 100 ntBASIC2.28□□□□□ -2.04
VPS9D1Q9Y2B5 RNU6-994P-201ENST00000410507 111 ntBASIC2.28□□□□□ -2.04
VPS9D1Q9Y2B5 snoU13.9-201ENST00000458927 103 ntBASIC2.28□□□□□ -2.04
VPS9D1Q9Y2B5 MIR4460-201ENST00000577862 86 ntBASIC2.28□□□□□ -2.04
VPS9D1Q9Y2B5 MIR6715A-201ENST00000615929 79 ntBASIC2.28□□□□□ -2.04
VPS9D1Q9Y2B5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.05
VPS9D1Q9Y2B5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS9D1Q9Y2B5 AC108210.2-201ENST00000503681 201 ntBASIC2.27□□□□□ -2.05
VPS9D1Q9Y2B5 MIR3937-201ENST00000580135 106 ntBASIC2.27□□□□□ -2.05
VPS9D1Q9Y2B5 MIR4713-201ENST00000582691 75 ntBASIC2.27□□□□□ -2.05
VPS9D1Q9Y2B5 AC046143.2-201ENST00000609789 160 ntBASIC2.27□□□□□ -2.05
VPS9D1Q9Y2B5 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
VPS9D1Q9Y2B5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS9D1Q9Y2B5 SNORA3.2-201ENST00000408221 125 ntBASIC2.26□□□□□ -2.05
VPS9D1Q9Y2B5 snoU13.13-201ENST00000458842 104 ntBASIC2.26□□□□□ -2.05
VPS9D1Q9Y2B5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.26□□□□□ -2.05
VPS9D1Q9Y2B5 RNU4-33P-201ENST00000364316 85 ntBASIC2.25□□□□□ -2.05
VPS9D1Q9Y2B5 MIR100-201ENST00000385259 80 ntBASIC2.25□□□□□ -2.05
VPS9D1Q9Y2B5 SNORA48.3-201ENST00000391081 134 ntBASIC2.25□□□□□ -2.05
VPS9D1Q9Y2B5 SNORD23.1-201ENST00000408212 104 ntBASIC2.25□□□□□ -2.05
VPS9D1Q9Y2B5 HMGN2P23-201ENST00000456759 269 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms