Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MIR4777-201ENST00000583710 86 ntBASIC0.6□□□□□ -2.31
SMARCAL1Q9NZC9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-766P-201ENST00000362478 107 ntBASIC0.59□□□□□ -2.31
SMARCAL1Q9NZC9 SNORD115-24-201ENST00000363528 82 ntBASIC0.59□□□□□ -2.31
SMARCAL1Q9NZC9 RNU4-45P-201ENST00000365469 141 ntBASIC0.59□□□□□ -2.31
SMARCAL1Q9NZC9 RNY1P4-201ENST00000384595 115 ntBASIC0.59□□□□□ -2.31
SMARCAL1Q9NZC9 MIR181B2-201ENST00000385004 89 ntBASIC0.59□□□□□ -2.31
SMARCAL1Q9NZC9 MIR140-201ENST00000385282 100 ntBASIC0.59□□□□□ -2.31
SMARCAL1Q9NZC9 AC244505.6-201ENST00000452829 130 ntBASIC0.59□□□□□ -2.31
SMARCAL1Q9NZC9 RNA5SP436-201ENST00000516020 115 ntBASIC0.59□□□□□ -2.31
SMARCAL1Q9NZC9 RNA5SP94-201ENST00000516917 108 ntBASIC0.59□□□□□ -2.31
SMARCAL1Q9NZC9 SNORA36.1-201ENST00000363424 132 ntBASIC0.58□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-1244P-201ENST00000363614 108 ntBASIC0.58□□□□□ -2.32
SMARCAL1Q9NZC9 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-1113P-201ENST00000384348 107 ntBASIC0.58□□□□□ -2.32
SMARCAL1Q9NZC9 SNORD28-201ENST00000384706 75 ntBASIC0.58□□□□□ -2.32
SMARCAL1Q9NZC9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.58□□□□□ -2.32
SMARCAL1Q9NZC9 AC097635.1-201ENST00000450678 155 ntBASIC0.58□□□□□ -2.32
SMARCAL1Q9NZC9 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
SMARCAL1Q9NZC9 AC244669.1-204ENST00000621564 178 ntBASIC0.58□□□□□ -2.32
SMARCAL1Q9NZC9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SMARCAL1Q9NZC9 SNORD36A-201ENST00000362874 73 ntBASIC0.57□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.57□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-147P-201ENST00000383983 107 ntBASIC0.57□□□□□ -2.32
SMARCAL1Q9NZC9 MIR519A1-201ENST00000385257 85 ntBASIC0.57□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-1254P-201ENST00000391266 104 ntBASIC0.57□□□□□ -2.32
SMARCAL1Q9NZC9 RNA5SP47-201ENST00000517230 109 ntBASIC0.57□□□□□ -2.32
SMARCAL1Q9NZC9 RNU7-161P-201ENST00000517289 62 ntBASIC0.57□□□□□ -2.32
SMARCAL1Q9NZC9 AC103810.7-201ENST00000607821 91 ntBASIC0.57□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-1125P-201ENST00000363601 107 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 RNA5SP517-201ENST00000364724 117 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-524P-201ENST00000384270 107 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-480P-201ENST00000384332 107 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-813P-201ENST00000384691 107 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-243P-201ENST00000391140 107 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-135P-201ENST00000516769 101 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 MIR4639-201ENST00000584938 69 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 AC025521.1-201ENST00000621624 286 ntBASIC0.56□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-1260P-201ENST00000362944 107 ntBASIC0.55□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-644P-201ENST00000391155 98 ntBASIC0.55□□□□□ -2.32
SMARCAL1Q9NZC9 AL161932.1-201ENST00000437408 146 ntBASIC0.55□□□□□ -2.32
SMARCAL1Q9NZC9 MIR4439-201ENST00000583746 80 ntBASIC0.55□□□□□ -2.32
SMARCAL1Q9NZC9 Y_RNA.107-201ENST00000363190 121 ntBASIC0.54□□□□□ -2.32
SMARCAL1Q9NZC9 RNU7-104P-201ENST00000459398 79 ntBASIC0.54□□□□□ -2.32
SMARCAL1Q9NZC9 RNU7-61P-201ENST00000515897 61 ntBASIC0.54□□□□□ -2.32
SMARCAL1Q9NZC9 RNA5SP121-201ENST00000516537 101 ntBASIC0.54□□□□□ -2.32
SMARCAL1Q9NZC9 AL513043.2-201ENST00000573941 143 ntBASIC0.54□□□□□ -2.32
SMARCAL1Q9NZC9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.54□□□□□ -2.32
SMARCAL1Q9NZC9 AC092634.7-201ENST00000621022 103 ntBASIC0.54□□□□□ -2.32
SMARCAL1Q9NZC9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.54□□□□□ -2.32
SMARCAL1Q9NZC9 Y_RNA.81-201ENST00000362997 102 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 RNA5SP403-201ENST00000363598 108 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 RNA5SP325-201ENST00000363756 130 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-716P-201ENST00000365621 103 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 SNORA8.2-201ENST00000384372 139 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 MIR193B-201ENST00000384907 83 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 RNA5SP268-201ENST00000516828 124 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 SNORA25.18-201ENST00000607153 114 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 Y_RNA.818-201ENST00000618813 71 ntBASIC0.53□□□□□ -2.32
SMARCAL1Q9NZC9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.53□□□□□ -2.33
SMARCAL1Q9NZC9 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-957P-201ENST00000363652 99 ntBASIC0.52□□□□□ -2.33
SMARCAL1Q9NZC9 snoU13.11-201ENST00000459219 104 ntBASIC0.52□□□□□ -2.33
SMARCAL1Q9NZC9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.52□□□□□ -2.33
SMARCAL1Q9NZC9 Y_RNA.93-201ENST00000363066 109 ntBASIC0.51□□□□□ -2.33
SMARCAL1Q9NZC9 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
SMARCAL1Q9NZC9 Y_RNA.544-201ENST00000384650 113 ntBASIC0.51□□□□□ -2.33
SMARCAL1Q9NZC9 RNA5SP227-201ENST00000516184 113 ntBASIC0.51□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-162P-201ENST00000516228 103 ntBASIC0.51□□□□□ -2.33
SMARCAL1Q9NZC9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.51□□□□□ -2.33
SMARCAL1Q9NZC9 MIR6828-201ENST00000636181 60 ntBASIC0.51□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-153P-201ENST00000364422 104 ntBASIC0.5□□□□□ -2.33
SMARCAL1Q9NZC9 Y_RNA.495-201ENST00000384435 112 ntBASIC0.5□□□□□ -2.33
SMARCAL1Q9NZC9 Y_RNA.705-201ENST00000516862 110 ntBASIC0.5□□□□□ -2.33
SMARCAL1Q9NZC9 MIR7107-201ENST00000611489 80 ntBASIC0.5□□□□□ -2.33
SMARCAL1Q9NZC9 AP001318.4-201ENST00000616637 121 ntBASIC0.5□□□□□ -2.33
SMARCAL1Q9NZC9 TRDV1-202ENST00000621643 102 ntBASIC0.5□□□□□ -2.33
SMARCAL1Q9NZC9 AC067863.3-201ENST00000624172 122 ntBASIC0.5□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-726P-201ENST00000364680 107 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-32P-201ENST00000383948 107 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-13P-201ENST00000384248 107 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-12P-201ENST00000384604 107 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-41P-201ENST00000384741 107 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 MIR936-201ENST00000401264 98 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 MIR548L-201ENST00000408303 86 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-887P-201ENST00000410660 100 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 SNORA40.8-201ENST00000411034 126 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 MTATP8P2-201ENST00000435212 202 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 MIR1273G-201ENST00000577677 100 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 U7.3-201ENST00000616123 62 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
SMARCAL1Q9NZC9 SNORD118-201ENST00000363593 134 ntBASIC0.48□□□□□ -2.33
SMARCAL1Q9NZC9 SNORD58A-201ENST00000383875 65 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 245.6 ms