Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SNORD33-201ENST00000362761 85 ntBASIC3.42□□□□□ -1.86
RNF216Q9NWF9 SNORD1A-201ENST00000364968 72 ntBASIC3.42□□□□□ -1.86
RNF216Q9NWF9 RNU6-851P-201ENST00000384565 107 ntBASIC3.42□□□□□ -1.86
RNF216Q9NWF9 RNA5SP229-201ENST00000410809 99 ntBASIC3.42□□□□□ -1.86
RNF216Q9NWF9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF216Q9NWF9 AL591704.2-201ENST00000421658 181 ntBASIC3.42□□□□□ -1.86
RNF216Q9NWF9 UQCRHP3-201ENST00000451503 251 ntBASIC3.42□□□□□ -1.86
RNF216Q9NWF9 AC009487.2-201ENST00000420969 6821 ntBASIC3.42□□□□□ -1.86
RNF216Q9NWF9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RNF216Q9NWF9 SNORA7.1-201ENST00000363750 139 ntBASIC3.41□□□□□ -1.86
RNF216Q9NWF9 RNU6-810P-201ENST00000364001 107 ntBASIC3.41□□□□□ -1.86
RNF216Q9NWF9 SNORA46-201ENST00000384762 135 ntBASIC3.41□□□□□ -1.86
RNF216Q9NWF9 HMGN2P23-201ENST00000456759 269 ntBASIC3.41□□□□□ -1.86
RNF216Q9NWF9 RNU6-135P-201ENST00000516769 101 ntBASIC3.41□□□□□ -1.86
RNF216Q9NWF9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.4□□□□□ -1.86
RNF216Q9NWF9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
RNF216Q9NWF9 RNU6-247P-201ENST00000362636 107 ntBASIC3.4□□□□□ -1.87
RNF216Q9NWF9 SNORA63.6-201ENST00000364921 119 ntBASIC3.4□□□□□ -1.87
RNF216Q9NWF9 SNORD28-201ENST00000384706 75 ntBASIC3.4□□□□□ -1.87
RNF216Q9NWF9 MIR644A-201ENST00000385262 94 ntBASIC3.4□□□□□ -1.87
RNF216Q9NWF9 AL033523.1-201ENST00000605153 153 ntBASIC3.4□□□□□ -1.87
RNF216Q9NWF9 AC244669.1-204ENST00000621564 178 ntBASIC3.4□□□□□ -1.87
RNF216Q9NWF9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF216Q9NWF9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF216Q9NWF9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF216Q9NWF9 Y_RNA.224-201ENST00000364308 111 ntBASIC3.39□□□□□ -1.87
RNF216Q9NWF9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF216Q9NWF9 MIR3945-201ENST00000581853 98 ntBASIC3.39□□□□□ -1.87
RNF216Q9NWF9 AC010297.1-201ENST00000623948 149 ntBASIC3.39□□□□□ -1.87
RNF216Q9NWF9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF216Q9NWF9 MIR22-201ENST00000362190 85 ntBASIC3.38□□□□□ -1.87
RNF216Q9NWF9 MIR3162-201ENST00000581818 82 ntBASIC3.38□□□□□ -1.87
RNF216Q9NWF9 MIR4639-201ENST00000584938 69 ntBASIC3.38□□□□□ -1.87
RNF216Q9NWF9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.38□□□□□ -1.87
RNF216Q9NWF9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF216Q9NWF9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF216Q9NWF9 MIR449A-201ENST00000362113 91 ntBASIC3.37□□□□□ -1.87
RNF216Q9NWF9 MIR302D-201ENST00000362275 68 ntBASIC3.37□□□□□ -1.87
RNF216Q9NWF9 Y_RNA.74-201ENST00000362911 99 ntBASIC3.37□□□□□ -1.87
RNF216Q9NWF9 RNA5SP393-201ENST00000363423 117 ntBASIC3.37□□□□□ -1.87
RNF216Q9NWF9 MIR527-201ENST00000385244 85 ntBASIC3.37□□□□□ -1.87
RNF216Q9NWF9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RNF216Q9NWF9 MIR4713-201ENST00000582691 75 ntBASIC3.37□□□□□ -1.87
RNF216Q9NWF9 MIR6715A-201ENST00000615929 79 ntBASIC3.37□□□□□ -1.87
RNF216Q9NWF9 RNU6-469P-201ENST00000516253 101 ntBASIC3.36□□□□□ -1.87
RNF216Q9NWF9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF216Q9NWF9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.35□□□□□ -1.87
RNF216Q9NWF9 AL512310.8-201ENST00000550183 120 ntBASIC3.35□□□□□ -1.87
RNF216Q9NWF9 MIR5194-201ENST00000582634 120 ntBASIC3.35□□□□□ -1.87
RNF216Q9NWF9 7SK.11-201ENST00000615477 250 ntBASIC3.35□□□□□ -1.87
RNF216Q9NWF9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RNF216Q9NWF9 SNORA67.1-201ENST00000364749 141 ntBASIC3.34□□□□□ -1.87
RNF216Q9NWF9 RNU6-1250P-201ENST00000391218 107 ntBASIC3.34□□□□□ -1.87
RNF216Q9NWF9 MIR934-201ENST00000401241 83 ntBASIC3.34□□□□□ -1.87
RNF216Q9NWF9 AL021921.1-201ENST00000442774 93 ntBASIC3.34□□□□□ -1.87
RNF216Q9NWF9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF216Q9NWF9 Y_RNA.363-201ENST00000365529 113 ntBASIC3.33□□□□□ -1.88
RNF216Q9NWF9 MIR524-201ENST00000385242 87 ntBASIC3.33□□□□□ -1.88
RNF216Q9NWF9 RNU7-21P-201ENST00000459430 62 ntBASIC3.33□□□□□ -1.88
RNF216Q9NWF9 CYP3A54P-201ENST00000566950 75 ntBASIC3.33□□□□□ -1.88
RNF216Q9NWF9 RNA5SP432-201ENST00000362480 116 ntBASIC3.32□□□□□ -1.88
RNF216Q9NWF9 RNA5SP356-201ENST00000515972 94 ntBASIC3.32□□□□□ -1.88
RNF216Q9NWF9 RNA5SP82-201ENST00000516707 92 ntBASIC3.32□□□□□ -1.88
RNF216Q9NWF9 MIR517C-201ENST00000385103 95 ntBASIC3.31□□□□□ -1.88
RNF216Q9NWF9 SNORD23.1-201ENST00000408212 104 ntBASIC3.31□□□□□ -1.88
RNF216Q9NWF9 SCARNA17.3-201ENST00000516381 125 ntBASIC3.31□□□□□ -1.88
RNF216Q9NWF9 RN7SKP88-201ENST00000516847 250 ntBASIC3.31□□□□□ -1.88
RNF216Q9NWF9 AC015712.3-201ENST00000559380 164 ntBASIC3.31□□□□□ -1.88
RNF216Q9NWF9 7SK.8-201ENST00000612110 250 ntBASIC3.31□□□□□ -1.88
RNF216Q9NWF9 7SK.13-201ENST00000622040 250 ntBASIC3.31□□□□□ -1.88
RNF216Q9NWF9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.3□□□□□ -1.88
RNF216Q9NWF9 SNORA54-201ENST00000384281 123 ntBASIC3.3□□□□□ -1.88
RNF216Q9NWF9 RNU7-90P-201ENST00000459216 62 ntBASIC3.3□□□□□ -1.88
RNF216Q9NWF9 RNU6-518P-201ENST00000516056 96 ntBASIC3.3□□□□□ -1.88
RNF216Q9NWF9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF216Q9NWF9 RNU6-726P-201ENST00000364680 107 ntBASIC3.29□□□□□ -1.88
RNF216Q9NWF9 RNU6-716P-201ENST00000365621 103 ntBASIC3.29□□□□□ -1.88
RNF216Q9NWF9 RNA5SP402-201ENST00000517148 110 ntBASIC3.29□□□□□ -1.88
RNF216Q9NWF9 MIR4287-201ENST00000579398 78 ntBASIC3.29□□□□□ -1.88
RNF216Q9NWF9 U6.96-201ENST00000636425 70 ntBASIC3.29□□□□□ -1.88
RNF216Q9NWF9 SNORA80D-201ENST00000384488 135 ntBASIC3.28□□□□□ -1.88
RNF216Q9NWF9 RNU6-172P-201ENST00000411000 93 ntBASIC3.28□□□□□ -1.88
RNF216Q9NWF9 AC002350.1-201ENST00000490759 375 ntBASIC3.28□□□□□ -1.88
RNF216Q9NWF9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RNF216Q9NWF9 Y_RNA.282-201ENST00000364793 102 ntBASIC3.27□□□□□ -1.89
RNF216Q9NWF9 RNA5SP274-201ENST00000410484 108 ntBASIC3.27□□□□□ -1.89
RNF216Q9NWF9 RNU6-419P-201ENST00000517030 63 ntBASIC3.27□□□□□ -1.89
RNF216Q9NWF9 MIR4435-1-201ENST00000582552 80 ntBASIC3.27□□□□□ -1.89
RNF216Q9NWF9 RMST_2.1-201ENST00000617263 136 ntBASIC3.27□□□□□ -1.89
RNF216Q9NWF9 SNORA9.2-201ENST00000365361 133 ntBASIC3.26□□□□□ -1.89
RNF216Q9NWF9 SNORA8.2-201ENST00000384372 139 ntBASIC3.26□□□□□ -1.89
RNF216Q9NWF9 RNA5SP484-201ENST00000458857 111 ntBASIC3.26□□□□□ -1.89
RNF216Q9NWF9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF216Q9NWF9 DEFA7P-201ENST00000382676 285 ntBASIC3.25□□□□□ -1.89
RNF216Q9NWF9 RNU6-246P-201ENST00000384702 107 ntBASIC3.25□□□□□ -1.89
RNF216Q9NWF9 RNU6-269P-201ENST00000391077 97 ntBASIC3.25□□□□□ -1.89
RNF216Q9NWF9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF216Q9NWF9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF216Q9NWF9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF216Q9NWF9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms