Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 SNORD101-201ENST00000384027 73 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 SNORA24B-201ENST00000384176 131 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 RPS27P16-201ENST00000425758 201 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 RNU7-185P-201ENST00000459215 60 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 AC005520.4-201ENST00000604337 90 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 MIR101-2-201ENST00000362195 79 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 Y_RNA.606-201ENST00000410579 103 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 MIR6082-201ENST00000613604 109 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 AC023934.1-201ENST00000574529 2389 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 Y_RNA.56-201ENST00000362798 112 ntBASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 RNU6-392P-201ENST00000364926 101 ntBASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 AC008834.1-201ENST00000511612 175 ntBASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 Y_RNA.697-201ENST00000516776 113 ntBASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 RNU7-10P-201ENST00000607194 63 ntBASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 MIR302D-201ENST00000362275 68 ntBASIC1.76□□□□□ -2.13
RC3H2Q9HBD1 RNU6-824P-201ENST00000363724 104 ntBASIC1.76□□□□□ -2.13
RC3H2Q9HBD1 AC097635.1-201ENST00000450678 155 ntBASIC1.76□□□□□ -2.13
RC3H2Q9HBD1 U6.81-201ENST00000612550 106 ntBASIC1.76□□□□□ -2.13
RC3H2Q9HBD1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 RNY4P3-201ENST00000365254 95 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 SNORD45A-201ENST00000384512 84 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 MIR1257-201ENST00000408490 117 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 SNORD83.1-201ENST00000411362 77 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 RNU6-1265P-201ENST00000516342 103 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 MIR9-2-201ENST00000384838 87 ntBASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 RNU6-765P-201ENST00000516916 99 ntBASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 MIR4422-201ENST00000581938 83 ntBASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 MIR3675-201ENST00000583661 73 ntBASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 RNU1-78P-201ENST00000391248 165 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 RNU6-935P-201ENST00000410371 100 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 AC097510.1-201ENST00000510945 133 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 RNU6-165P-201ENST00000517170 99 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 SNORD115-22-201ENST00000364456 82 ntBASIC1.72□□□□□ -2.13
RC3H2Q9HBD1 MIR451A-201ENST00000385059 72 ntBASIC1.72□□□□□ -2.13
RC3H2Q9HBD1 MIR599-201ENST00000385069 95 ntBASIC1.72□□□□□ -2.13
RC3H2Q9HBD1 MIR1276-201ENST00000408707 83 ntBASIC1.72□□□□□ -2.13
RC3H2Q9HBD1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
RC3H2Q9HBD1 RNU6-681P-201ENST00000364012 104 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 RNA5SP245-201ENST00000364239 121 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 RNU6-630P-201ENST00000391258 106 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 RNU6-1052P-201ENST00000411398 104 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 RNU6-719P-201ENST00000516671 104 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 MIR3664-201ENST00000579074 99 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 Y_RNA.443-201ENST00000384135 111 ntBASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 SNORD116-24-201ENST00000384549 92 ntBASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 MIR934-201ENST00000401241 83 ntBASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 SNORA25.4-201ENST00000363666 124 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 Y_RNA.258-201ENST00000364613 105 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 MIR125B2-201ENST00000385128 89 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 RNU6-881P-201ENST00000516813 102 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 AC036111.3-201ENST00000526389 112 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 AC138907.6-201ENST00000568401 126 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 AC138869.1-201ENST00000568623 124 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 SNORD45.1-201ENST00000363181 77 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 RNU6-895P-201ENST00000384125 103 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 AC093423.1-201ENST00000440817 142 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 AL512310.8-201ENST00000550183 120 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 MIR4771-2-201ENST00000577758 74 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 MIR4421-201ENST00000578133 69 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 MIR4771-1-201ENST00000582617 74 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 RNU6-934P-201ENST00000365154 107 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 RNU6-987P-201ENST00000384759 104 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 RNU6-604P-201ENST00000390917 100 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 MTND4LP19-201ENST00000403051 166 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 7SK.8-201ENST00000612110 250 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 7SK.11-201ENST00000615477 250 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 7SK.13-201ENST00000622040 250 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms