Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RNU6-1254P-201ENST00000391266 104 ntBASIC0.54□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.629-201ENST00000411368 105 ntBASIC0.54□□□□□ -2.32
PAAF1Q9BRP4 RNU7-106P-201ENST00000459514 67 ntBASIC0.54□□□□□ -2.32
PAAF1Q9BRP4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
PAAF1Q9BRP4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
PAAF1Q9BRP4 RNU6-1290P-201ENST00000362957 109 ntBASIC0.53□□□□□ -2.32
PAAF1Q9BRP4 SNORA36.1-201ENST00000363424 132 ntBASIC0.53□□□□□ -2.32
PAAF1Q9BRP4 RNU6-1125P-201ENST00000363601 107 ntBASIC0.53□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.173-201ENST00000363776 113 ntBASIC0.53□□□□□ -2.32
PAAF1Q9BRP4 RNU6-716P-201ENST00000365621 103 ntBASIC0.53□□□□□ -2.32
PAAF1Q9BRP4 RNU6-480P-201ENST00000384332 107 ntBASIC0.53□□□□□ -2.32
PAAF1Q9BRP4 RN7SKP12-201ENST00000516275 143 ntBASIC0.53□□□□□ -2.32
PAAF1Q9BRP4 RNU6-1325P-201ENST00000364905 105 ntBASIC0.52□□□□□ -2.33
PAAF1Q9BRP4 MIR518A1-201ENST00000385068 85 ntBASIC0.52□□□□□ -2.33
PAAF1Q9BRP4 MIR519A1-201ENST00000385257 85 ntBASIC0.52□□□□□ -2.33
PAAF1Q9BRP4 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
PAAF1Q9BRP4 RNU6-86P-201ENST00000606534 107 ntBASIC0.52□□□□□ -2.33
PAAF1Q9BRP4 AC067863.3-201ENST00000624172 122 ntBASIC0.52□□□□□ -2.33
PAAF1Q9BRP4 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
PAAF1Q9BRP4 RNU6-524P-201ENST00000384270 107 ntBASIC0.51□□□□□ -2.33
PAAF1Q9BRP4 AC109327.2-201ENST00000448339 378 ntBASIC0.51□□□□□ -2.33
PAAF1Q9BRP4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.5□□□□□ -2.33
PAAF1Q9BRP4 RNA5SP325-201ENST00000363756 130 ntBASIC0.5□□□□□ -2.33
PAAF1Q9BRP4 RNU6-1163P-201ENST00000364516 107 ntBASIC0.5□□□□□ -2.33
PAAF1Q9BRP4 Y_RNA.601-201ENST00000410500 113 ntBASIC0.5□□□□□ -2.33
PAAF1Q9BRP4 RNU6-589P-201ENST00000516485 107 ntBASIC0.5□□□□□ -2.33
PAAF1Q9BRP4 Y_RNA.709-201ENST00000516952 92 ntBASIC0.5□□□□□ -2.33
PAAF1Q9BRP4 RNU7-161P-201ENST00000517289 62 ntBASIC0.5□□□□□ -2.33
PAAF1Q9BRP4 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
PAAF1Q9BRP4 MIR6828-201ENST00000636181 60 ntBASIC0.5□□□□□ -2.33
PAAF1Q9BRP4 SNORD118-201ENST00000363593 134 ntBASIC0.49□□□□□ -2.33
PAAF1Q9BRP4 Y_RNA.291-201ENST00000364886 113 ntBASIC0.49□□□□□ -2.33
PAAF1Q9BRP4 RNU6-1113P-201ENST00000384348 107 ntBASIC0.49□□□□□ -2.33
PAAF1Q9BRP4 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
PAAF1Q9BRP4 MIR7107-201ENST00000611489 80 ntBASIC0.49□□□□□ -2.33
PAAF1Q9BRP4 RNA5SP403-201ENST00000363598 108 ntBASIC0.48□□□□□ -2.33
PAAF1Q9BRP4 MIR181B2-201ENST00000385004 89 ntBASIC0.48□□□□□ -2.33
PAAF1Q9BRP4 MIR3613-201ENST00000579844 87 ntBASIC0.48□□□□□ -2.33
PAAF1Q9BRP4 MIR4439-201ENST00000583746 80 ntBASIC0.48□□□□□ -2.33
PAAF1Q9BRP4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
PAAF1Q9BRP4 Y_RNA.95-201ENST00000363079 95 ntBASIC0.47□□□□□ -2.33
PAAF1Q9BRP4 SNORA51.5-201ENST00000384126 131 ntBASIC0.47□□□□□ -2.33
PAAF1Q9BRP4 MIR193B-201ENST00000384907 83 ntBASIC0.47□□□□□ -2.33
PAAF1Q9BRP4 RNU7-13P-201ENST00000516413 62 ntBASIC0.47□□□□□ -2.33
PAAF1Q9BRP4 uc_338.28-201ENST00000612082 187 ntBASIC0.47□□□□□ -2.33
PAAF1Q9BRP4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
PAAF1Q9BRP4 SNORD36A-201ENST00000362874 73 ntBASIC0.46□□□□□ -2.34
PAAF1Q9BRP4 Y_RNA.78-201ENST00000362970 110 ntBASIC0.46□□□□□ -2.34
PAAF1Q9BRP4 SNORA19.1-201ENST00000410656 129 ntBASIC0.46□□□□□ -2.34
PAAF1Q9BRP4 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
PAAF1Q9BRP4 SCARNA23-201ENST00000516060 130 ntBASIC0.46□□□□□ -2.34
PAAF1Q9BRP4 AC010487.4-201ENST00000637027 61 ntBASIC0.46□□□□□ -2.34
PAAF1Q9BRP4 RNU6-1244P-201ENST00000363614 108 ntBASIC0.45□□□□□ -2.34
PAAF1Q9BRP4 RNU6-756P-201ENST00000383997 107 ntBASIC0.45□□□□□ -2.34
PAAF1Q9BRP4 RNU6-106P-201ENST00000384405 107 ntBASIC0.45□□□□□ -2.34
PAAF1Q9BRP4 RNU6-554P-201ENST00000410466 106 ntBASIC0.45□□□□□ -2.34
PAAF1Q9BRP4 RNU6-795P-201ENST00000516323 103 ntBASIC0.45□□□□□ -2.34
PAAF1Q9BRP4 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
PAAF1Q9BRP4 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
PAAF1Q9BRP4 RNU6-726P-201ENST00000364680 107 ntBASIC0.44□□□□□ -2.34
PAAF1Q9BRP4 RNU6-466P-201ENST00000391224 103 ntBASIC0.44□□□□□ -2.34
PAAF1Q9BRP4 RNU2-59P-201ENST00000410482 191 ntBASIC0.44□□□□□ -2.34
PAAF1Q9BRP4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
PAAF1Q9BRP4 AC069271.1-201ENST00000445577 156 ntBASIC0.44□□□□□ -2.34
PAAF1Q9BRP4 RNU6-904P-201ENST00000516206 101 ntBASIC0.44□□□□□ -2.34
PAAF1Q9BRP4 MIR1273G-201ENST00000577677 100 ntBASIC0.44□□□□□ -2.34
PAAF1Q9BRP4 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
PAAF1Q9BRP4 Y_RNA.467-201ENST00000384297 102 ntBASIC0.43□□□□□ -2.34
PAAF1Q9BRP4 RNU6-813P-201ENST00000384691 107 ntBASIC0.43□□□□□ -2.34
PAAF1Q9BRP4 AL031737.1-201ENST00000450125 223 ntBASIC0.43□□□□□ -2.34
PAAF1Q9BRP4 SNORD20-201ENST00000384550 80 ntBASIC0.42□□□□□ -2.34
PAAF1Q9BRP4 MIR590-201ENST00000385008 97 ntBASIC0.42□□□□□ -2.34
PAAF1Q9BRP4 AC103810.7-201ENST00000607821 91 ntBASIC0.42□□□□□ -2.34
PAAF1Q9BRP4 AC012531.4-201ENST00000616509 177 ntBASIC0.42□□□□□ -2.34
PAAF1Q9BRP4 TRDV1-202ENST00000621643 102 ntBASIC0.42□□□□□ -2.34
PAAF1Q9BRP4 Y_RNA.96-201ENST00000363092 109 ntBASIC0.41□□□□□ -2.34
PAAF1Q9BRP4 SNORD44.1-201ENST00000363202 61 ntBASIC0.41□□□□□ -2.34
PAAF1Q9BRP4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.41□□□□□ -2.34
PAAF1Q9BRP4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
PAAF1Q9BRP4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.41□□□□□ -2.34
PAAF1Q9BRP4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.41□□□□□ -2.34
PAAF1Q9BRP4 RNY4P18-201ENST00000391107 89 ntBASIC0.41□□□□□ -2.34
PAAF1Q9BRP4 RNU7-74P-201ENST00000459104 62 ntBASIC0.41□□□□□ -2.34
PAAF1Q9BRP4 RNU6-919P-201ENST00000516731 104 ntBASIC0.41□□□□□ -2.34
PAAF1Q9BRP4 AC025521.1-201ENST00000621624 286 ntBASIC0.41□□□□□ -2.34
PAAF1Q9BRP4 SNORD115-44-201ENST00000365391 82 ntBASIC0.4□□□□□ -2.35
PAAF1Q9BRP4 AL161932.1-201ENST00000437408 146 ntBASIC0.4□□□□□ -2.35
PAAF1Q9BRP4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.4□□□□□ -2.35
PAAF1Q9BRP4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.4□□□□□ -2.35
PAAF1Q9BRP4 RNU6-863P-201ENST00000515989 104 ntBASIC0.4□□□□□ -2.35
PAAF1Q9BRP4 MIR103A1-201ENST00000362165 78 ntBASIC0.39□□□□□ -2.35
PAAF1Q9BRP4 RNU6-766P-201ENST00000362478 107 ntBASIC0.39□□□□□ -2.35
PAAF1Q9BRP4 RNU6-957P-201ENST00000363652 99 ntBASIC0.39□□□□□ -2.35
PAAF1Q9BRP4 SNORD41.1-201ENST00000391000 69 ntBASIC0.39□□□□□ -2.35
PAAF1Q9BRP4 RNU6-1265P-201ENST00000516342 103 ntBASIC0.39□□□□□ -2.35
PAAF1Q9BRP4 Y_RNA.705-201ENST00000516862 110 ntBASIC0.39□□□□□ -2.35
PAAF1Q9BRP4 MIR4777-201ENST00000583710 86 ntBASIC0.39□□□□□ -2.35
PAAF1Q9BRP4 MIR548Z-201ENST00000584743 97 ntBASIC0.39□□□□□ -2.35
PAAF1Q9BRP4 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
PAAF1Q9BRP4 Y_RNA.107-201ENST00000363190 121 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms