Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 RNU6-832P-201ENST00000363319 107 ntBASIC0.58□□□□□ -2.32
NUP88Q99567 RNU6-1107P-201ENST00000364817 104 ntBASIC0.58□□□□□ -2.32
NUP88Q99567 MIR516A2-201ENST00000384888 90 ntBASIC0.58□□□□□ -2.32
NUP88Q99567 MIR516A1-201ENST00000385033 90 ntBASIC0.58□□□□□ -2.32
NUP88Q99567 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
NUP88Q99567 AL109933.3-201ENST00000619095 188 ntBASIC0.58□□□□□ -2.32
NUP88Q99567 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
NUP88Q99567 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.58□□□□□ -2.32
NUP88Q99567 MIR330-201ENST00000362196 94 ntBASIC0.57□□□□□ -2.32
NUP88Q99567 Y_RNA.681-201ENST00000516445 113 ntBASIC0.57□□□□□ -2.32
NUP88Q99567 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
NUP88Q99567 Y_RNA.178-201ENST00000363832 102 ntBASIC0.56□□□□□ -2.32
NUP88Q99567 RNU4-36P-201ENST00000364294 144 ntBASIC0.56□□□□□ -2.32
NUP88Q99567 Y_RNA.377-201ENST00000365644 108 ntBASIC0.56□□□□□ -2.32
NUP88Q99567 RNU6-1014P-201ENST00000383940 103 ntBASIC0.56□□□□□ -2.32
NUP88Q99567 RNU6-1081P-201ENST00000384537 107 ntBASIC0.56□□□□□ -2.32
NUP88Q99567 SNORA68.3-201ENST00000515906 83 ntBASIC0.56□□□□□ -2.32
NUP88Q99567 MIR5087-201ENST00000635826 76 ntBASIC0.56□□□□□ -2.32
NUP88Q99567 RNU6-834P-201ENST00000362367 110 ntBASIC0.55□□□□□ -2.32
NUP88Q99567 Y_RNA.68-201ENST00000362881 102 ntBASIC0.55□□□□□ -2.32
NUP88Q99567 Y_RNA.163-201ENST00000363702 113 ntBASIC0.55□□□□□ -2.32
NUP88Q99567 SNORD113-1-201ENST00000365321 69 ntBASIC0.55□□□□□ -2.32
NUP88Q99567 RNU6-524P-201ENST00000384270 107 ntBASIC0.55□□□□□ -2.32
NUP88Q99567 RNU6-243P-201ENST00000391140 107 ntBASIC0.55□□□□□ -2.32
NUP88Q99567 RNU7-106P-201ENST00000459514 67 ntBASIC0.55□□□□□ -2.32
NUP88Q99567 RNU6-406P-201ENST00000516470 107 ntBASIC0.55□□□□□ -2.32
NUP88Q99567 MIR7107-201ENST00000611489 80 ntBASIC0.55□□□□□ -2.32
NUP88Q99567 AC067863.3-201ENST00000624172 122 ntBASIC0.55□□□□□ -2.32
NUP88Q99567 RNA5SP257-201ENST00000363023 116 ntBASIC0.54□□□□□ -2.32
NUP88Q99567 SNORD118-201ENST00000363593 134 ntBASIC0.54□□□□□ -2.32
NUP88Q99567 Y_RNA.323-201ENST00000365157 109 ntBASIC0.54□□□□□ -2.32
NUP88Q99567 RNU6-1254P-201ENST00000391266 104 ntBASIC0.54□□□□□ -2.32
NUP88Q99567 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
NUP88Q99567 RNU7-161P-201ENST00000517289 62 ntBASIC0.54□□□□□ -2.32
NUP88Q99567 Y_RNA.10-201ENST00000362371 110 ntBASIC0.53□□□□□ -2.32
NUP88Q99567 SNORD45B-201ENST00000364617 72 ntBASIC0.53□□□□□ -2.32
NUP88Q99567 MIR519A1-201ENST00000385257 85 ntBASIC0.53□□□□□ -2.32
NUP88Q99567 MIR1197-201ENST00000408818 88 ntBASIC0.53□□□□□ -2.32
NUP88Q99567 MIR6828-201ENST00000636181 60 ntBASIC0.53□□□□□ -2.32
NUP88Q99567 RNU6-1260P-201ENST00000362944 107 ntBASIC0.52□□□□□ -2.33
NUP88Q99567 RNU6-1099P-201ENST00000363533 107 ntBASIC0.52□□□□□ -2.33
NUP88Q99567 RNU6-1125P-201ENST00000363601 107 ntBASIC0.52□□□□□ -2.33
NUP88Q99567 Y_RNA.173-201ENST00000363776 113 ntBASIC0.52□□□□□ -2.33
NUP88Q99567 RNU6-480P-201ENST00000384332 107 ntBASIC0.52□□□□□ -2.33
NUP88Q99567 MIR1302-5-201ENST00000408164 150 ntBASIC0.52□□□□□ -2.33
NUP88Q99567 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
NUP88Q99567 U2.22-201ENST00000636441 106 ntBASIC0.52□□□□□ -2.33
NUP88Q99567 RNA5SP403-201ENST00000363598 108 ntBASIC0.5□□□□□ -2.33
NUP88Q99567 Y_RNA.273-201ENST00000364703 102 ntBASIC0.5□□□□□ -2.33
NUP88Q99567 AC109327.2-201ENST00000448339 378 ntBASIC0.5□□□□□ -2.33
NUP88Q99567 RNU7-13P-201ENST00000516413 62 ntBASIC0.5□□□□□ -2.33
NUP88Q99567 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
NUP88Q99567 MIRLET7D-201ENST00000362263 87 ntBASIC0.49□□□□□ -2.33
NUP88Q99567 RNU2-59P-201ENST00000410482 191 ntBASIC0.49□□□□□ -2.33
NUP88Q99567 AC069271.1-201ENST00000445577 156 ntBASIC0.49□□□□□ -2.33
NUP88Q99567 MIR548AI-201ENST00000579940 88 ntBASIC0.49□□□□□ -2.33
NUP88Q99567 RNU6-86P-201ENST00000606534 107 ntBASIC0.49□□□□□ -2.33
NUP88Q99567 AC243829.6-201ENST00000612652 106 ntBASIC0.49□□□□□ -2.33
NUP88Q99567 RNU6-1163P-201ENST00000364516 107 ntBASIC0.48□□□□□ -2.33
NUP88Q99567 Y_RNA.433-201ENST00000384089 102 ntBASIC0.48□□□□□ -2.33
NUP88Q99567 RNU6-726P-201ENST00000364680 107 ntBASIC0.47□□□□□ -2.33
NUP88Q99567 Y_RNA.423-201ENST00000384057 113 ntBASIC0.47□□□□□ -2.33
NUP88Q99567 MIR3613-201ENST00000579844 87 ntBASIC0.47□□□□□ -2.33
NUP88Q99567 MIR181B2-201ENST00000385004 89 ntBASIC0.46□□□□□ -2.34
NUP88Q99567 MIR103A1-201ENST00000362165 78 ntBASIC0.45□□□□□ -2.34
NUP88Q99567 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
NUP88Q99567 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
NUP88Q99567 RNU6-466P-201ENST00000391224 103 ntBASIC0.45□□□□□ -2.34
NUP88Q99567 Y_RNA.601-201ENST00000410500 113 ntBASIC0.45□□□□□ -2.34
NUP88Q99567 Y_RNA.629-201ENST00000411368 105 ntBASIC0.45□□□□□ -2.34
NUP88Q99567 MIR4514-201ENST00000581410 57 ntBASIC0.45□□□□□ -2.34
NUP88Q99567 SNORD36A-201ENST00000362874 73 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 Y_RNA.95-201ENST00000363079 95 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 RNA5SP62-201ENST00000363457 110 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 RNU6-1244P-201ENST00000363614 108 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 RNU6-1126P-201ENST00000384002 107 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 RNU6-863P-201ENST00000515989 104 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 RNU6-589P-201ENST00000516485 107 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 MIR4439-201ENST00000583746 80 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 uc_338.28-201ENST00000612082 187 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 MIR2909-201ENST00000617113 69 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 TRDV1-202ENST00000621643 102 ntBASIC0.44□□□□□ -2.34
NUP88Q99567 AC090625.1-201ENST00000357130 210 ntBASIC0.43□□□□□ -2.34
NUP88Q99567 RNU6-1325P-201ENST00000364905 105 ntBASIC0.43□□□□□ -2.34
NUP88Q99567 RNU6-1113P-201ENST00000384348 107 ntBASIC0.43□□□□□ -2.34
NUP88Q99567 SNORA19.1-201ENST00000410656 129 ntBASIC0.43□□□□□ -2.34
NUP88Q99567 AL161932.1-201ENST00000437408 146 ntBASIC0.43□□□□□ -2.34
NUP88Q99567 RNU6-795P-201ENST00000516323 103 ntBASIC0.43□□□□□ -2.34
NUP88Q99567 Y_RNA.709-201ENST00000516952 92 ntBASIC0.43□□□□□ -2.34
NUP88Q99567 MIR4752-201ENST00000579672 72 ntBASIC0.43□□□□□ -2.34
NUP88Q99567 RNU6-1290P-201ENST00000362957 109 ntBASIC0.42□□□□□ -2.34
NUP88Q99567 SNORA51.5-201ENST00000384126 131 ntBASIC0.42□□□□□ -2.34
NUP88Q99567 AC073261.1-201ENST00000429409 121 ntBASIC0.42□□□□□ -2.34
NUP88Q99567 SCARNA23-201ENST00000516060 130 ntBASIC0.42□□□□□ -2.34
NUP88Q99567 RNU7-129P-201ENST00000516128 62 ntBASIC0.42□□□□□ -2.34
NUP88Q99567 SNORA62.5-201ENST00000516634 120 ntBASIC0.42□□□□□ -2.34
NUP88Q99567 Y_RNA.78-201ENST00000362970 110 ntBASIC0.41□□□□□ -2.34
NUP88Q99567 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
NUP88Q99567 RNU6-554P-201ENST00000410466 106 ntBASIC0.41□□□□□ -2.34
NUP88Q99567 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 251.5 ms