Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU6-250P-201ENST00000516958 103 ntBASIC2.23□□□□□ -2.05
CNTNAP3BQ96NU0 MIR4287-201ENST00000579398 78 ntBASIC2.23□□□□□ -2.05
CNTNAP3BQ96NU0 MIR4713-201ENST00000582691 75 ntBASIC2.23□□□□□ -2.05
CNTNAP3BQ96NU0 AC103810.8-201ENST00000607347 118 ntBASIC2.23□□□□□ -2.05
CNTNAP3BQ96NU0 GHRLOS.1-201ENST00000610995 70 ntBASIC2.23□□□□□ -2.05
CNTNAP3BQ96NU0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.23□□□□□ -2.05
CNTNAP3BQ96NU0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.23□□□□□ -2.05
CNTNAP3BQ96NU0 RNU6-495P-201ENST00000362995 107 ntBASIC2.22□□□□□ -2.05
CNTNAP3BQ96NU0 SNORA6-201ENST00000384033 151 ntBASIC2.22□□□□□ -2.05
CNTNAP3BQ96NU0 MIR583-201ENST00000384846 75 ntBASIC2.22□□□□□ -2.05
CNTNAP3BQ96NU0 RNA5SP299-201ENST00000391203 116 ntBASIC2.22□□□□□ -2.05
CNTNAP3BQ96NU0 RNA5SP95-201ENST00000410319 137 ntBASIC2.22□□□□□ -2.05
CNTNAP3BQ96NU0 MIR8074-201ENST00000615081 81 ntBASIC2.22□□□□□ -2.05
CNTNAP3BQ96NU0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
CNTNAP3BQ96NU0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CNTNAP3BQ96NU0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
CNTNAP3BQ96NU0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
CNTNAP3BQ96NU0 RNU6-645P-201ENST00000364649 106 ntBASIC2.21□□□□□ -2.06
CNTNAP3BQ96NU0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CNTNAP3BQ96NU0 RNA5SP210-201ENST00000391034 120 ntBASIC2.21□□□□□ -2.06
CNTNAP3BQ96NU0 AC026436.1-201ENST00000510537 270 ntBASIC2.21□□□□□ -2.06
CNTNAP3BQ96NU0 AC015688.6-201ENST00000577737 104 ntBASIC2.21□□□□□ -2.06
CNTNAP3BQ96NU0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CNTNAP3BQ96NU0 RNU6-439P-201ENST00000384188 106 ntBASIC2.2□□□□□ -2.06
CNTNAP3BQ96NU0 AL133373.1-201ENST00000497098 94 ntBASIC2.2□□□□□ -2.06
CNTNAP3BQ96NU0 MIR6509-201ENST00000614603 85 ntBASIC2.2□□□□□ -2.06
CNTNAP3BQ96NU0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.19□□□□□ -2.06
CNTNAP3BQ96NU0 MIR1291-201ENST00000627649 87 ntBASIC2.19□□□□□ -2.06
CNTNAP3BQ96NU0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CNTNAP3BQ96NU0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CNTNAP3BQ96NU0 RNA5SP215-201ENST00000363440 122 ntBASIC2.18□□□□□ -2.06
CNTNAP3BQ96NU0 RNA5SP245-201ENST00000364239 121 ntBASIC2.18□□□□□ -2.06
CNTNAP3BQ96NU0 RNU4-62P-201ENST00000410125 130 ntBASIC2.18□□□□□ -2.06
CNTNAP3BQ96NU0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.18□□□□□ -2.06
CNTNAP3BQ96NU0 NAMPTP3-201ENST00000569273 224 ntBASIC2.18□□□□□ -2.06
CNTNAP3BQ96NU0 MIR4452-201ENST00000583004 71 ntBASIC2.18□□□□□ -2.06
CNTNAP3BQ96NU0 MIR5092-201ENST00000583139 88 ntBASIC2.18□□□□□ -2.06
CNTNAP3BQ96NU0 SNORD115-44-201ENST00000365391 82 ntBASIC2.17□□□□□ -2.06
CNTNAP3BQ96NU0 MIR203A-201ENST00000384836 110 ntBASIC2.17□□□□□ -2.06
CNTNAP3BQ96NU0 MIR1257-201ENST00000408490 117 ntBASIC2.17□□□□□ -2.06
CNTNAP3BQ96NU0 snoU13.21-201ENST00000459368 105 ntBASIC2.17□□□□□ -2.06
CNTNAP3BQ96NU0 SNORA77B-201ENST00000578179 125 ntBASIC2.17□□□□□ -2.06
CNTNAP3BQ96NU0 RNU6-92P-201ENST00000605893 104 ntBASIC2.17□□□□□ -2.06
CNTNAP3BQ96NU0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CNTNAP3BQ96NU0 RNA5SP264-201ENST00000363115 107 ntBASIC2.16□□□□□ -2.06
CNTNAP3BQ96NU0 SNORA44.1-201ENST00000517031 108 ntBASIC2.16□□□□□ -2.06
CNTNAP3BQ96NU0 MIR3657-201ENST00000584818 117 ntBASIC2.16□□□□□ -2.06
CNTNAP3BQ96NU0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CNTNAP3BQ96NU0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CNTNAP3BQ96NU0 MIR103A2-201ENST00000362154 78 ntBASIC2.15□□□□□ -2.07
CNTNAP3BQ96NU0 SNORD60.1-201ENST00000362451 73 ntBASIC2.15□□□□□ -2.07
CNTNAP3BQ96NU0 SNORA75.1-201ENST00000391130 148 ntBASIC2.15□□□□□ -2.07
CNTNAP3BQ96NU0 AC244505.6-201ENST00000452829 130 ntBASIC2.15□□□□□ -2.07
CNTNAP3BQ96NU0 AC016717.2-201ENST00000609089 5141 ntBASIC2.15□□□□□ -2.07
CNTNAP3BQ96NU0 SNORD33-201ENST00000362761 85 ntBASIC2.14□□□□□ -2.07
CNTNAP3BQ96NU0 Y_RNA.379-201ENST00000365653 102 ntBASIC2.14□□□□□ -2.07
CNTNAP3BQ96NU0 SUMO2P12-201ENST00000405924 140 ntBASIC2.14□□□□□ -2.07
CNTNAP3BQ96NU0 SNORD13-201ENST00000459299 104 ntBASIC2.14□□□□□ -2.07
CNTNAP3BQ96NU0 AL645939.4-201ENST00000604495 135 ntBASIC2.14□□□□□ -2.07
CNTNAP3BQ96NU0 MIR6895-201ENST00000613497 78 ntBASIC2.14□□□□□ -2.07
CNTNAP3BQ96NU0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 RNU6-1312P-201ENST00000362425 108 ntBASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 Y_RNA.30-201ENST00000362572 97 ntBASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 RNA5SP456-201ENST00000364002 114 ntBASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 RNA5SP190-201ENST00000365222 118 ntBASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 RNU6-656P-201ENST00000516785 107 ntBASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 MIR4299-201ENST00000577899 72 ntBASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 MIR548AG2-201ENST00000581228 64 ntBASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 MIR6515-201ENST00000619843 57 ntBASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.13□□□□□ -2.07
CNTNAP3BQ96NU0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CNTNAP3BQ96NU0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CNTNAP3BQ96NU0 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
CNTNAP3BQ96NU0 snoU13.9-201ENST00000458927 103 ntBASIC2.12□□□□□ -2.07
CNTNAP3BQ96NU0 PVT1_3.1-201ENST00000620853 95 ntBASIC2.12□□□□□ -2.07
CNTNAP3BQ96NU0 MIR8063-201ENST00000621930 81 ntBASIC2.12□□□□□ -2.07
CNTNAP3BQ96NU0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 RNU6-260P-201ENST00000384092 107 ntBASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 MIR125B2-201ENST00000385128 89 ntBASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 MIR221-201ENST00000385135 110 ntBASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 SNORD83.1-201ENST00000411362 77 ntBASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 RNU6-947P-201ENST00000516264 106 ntBASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 RNA5SP61-201ENST00000516453 100 ntBASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 RNU6-1089P-201ENST00000516473 104 ntBASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 SNORA40.17-201ENST00000517256 115 ntBASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CNTNAP3BQ96NU0 MIRLET7G-201ENST00000362280 84 ntBASIC2.1□□□□□ -2.07
CNTNAP3BQ96NU0 RNU6-1126P-201ENST00000384002 107 ntBASIC2.1□□□□□ -2.07
CNTNAP3BQ96NU0 RNU6-1065P-201ENST00000384513 106 ntBASIC2.1□□□□□ -2.07
CNTNAP3BQ96NU0 RNU6-535P-201ENST00000384722 107 ntBASIC2.1□□□□□ -2.07
CNTNAP3BQ96NU0 MIR30A-201ENST00000385092 71 ntBASIC2.1□□□□□ -2.07
CNTNAP3BQ96NU0 MIR5694-201ENST00000581190 76 ntBASIC2.1□□□□□ -2.07
CNTNAP3BQ96NU0 MIR548O2-201ENST00000616090 70 ntBASIC2.1□□□□□ -2.07
CNTNAP3BQ96NU0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CNTNAP3BQ96NU0 RNU6-753P-201ENST00000363926 107 ntBASIC2.09□□□□□ -2.07
CNTNAP3BQ96NU0 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
CNTNAP3BQ96NU0 MIR216B-201ENST00000390186 82 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms