Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SNORA31.24-201ENST00000517232 57 ntBASIC1.58□□□□□ -2.16
DDX1Q92499 AL645939.4-201ENST00000604495 135 ntBASIC1.58□□□□□ -2.16
DDX1Q92499 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
DDX1Q92499 MIRLET7F1-201ENST00000362202 87 ntBASIC1.57□□□□□ -2.16
DDX1Q92499 MIR222-201ENST00000384992 110 ntBASIC1.57□□□□□ -2.16
DDX1Q92499 SNORD77.2-201ENST00000391045 68 ntBASIC1.57□□□□□ -2.16
DDX1Q92499 SNORD93-201ENST00000408813 74 ntBASIC1.57□□□□□ -2.16
DDX1Q92499 snoU13.21-201ENST00000459368 105 ntBASIC1.57□□□□□ -2.16
DDX1Q92499 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
DDX1Q92499 MIR548U-201ENST00000390728 81 ntBASIC1.56□□□□□ -2.16
DDX1Q92499 RNU6-466P-201ENST00000391224 103 ntBASIC1.56□□□□□ -2.16
DDX1Q92499 snoU13.17-201ENST00000458802 104 ntBASIC1.56□□□□□ -2.16
DDX1Q92499 AC013244.2-201ENST00000603396 103 ntBASIC1.56□□□□□ -2.16
DDX1Q92499 MTRNR2L2-201ENST00000604882 87 ntBASIC1.56□□□□□ -2.16
DDX1Q92499 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
DDX1Q92499 Y_RNA.56-201ENST00000362798 112 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 RNU6-1260P-201ENST00000362944 107 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 Y_RNA.264-201ENST00000364665 102 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 RNU6-590P-201ENST00000365039 107 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 Y_RNA.363-201ENST00000365529 113 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 RNU6-411P-201ENST00000384451 107 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 Y_RNA.536-201ENST00000384621 113 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 MIR635-201ENST00000384830 98 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 AL606490.4-201ENST00000423117 127 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 RNU7-195P-201ENST00000458793 62 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 RNU7-185P-201ENST00000459215 60 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 SNORD79.1-201ENST00000516069 84 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 RNU6-687P-201ENST00000516443 89 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 RNU6-1015P-201ENST00000517121 99 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 RNU6-1223P-201ENST00000517124 104 ntBASIC1.55□□□□□ -2.16
DDX1Q92499 RNA5SP327-201ENST00000362494 101 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 RNU6-53P-201ENST00000365367 106 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 SNORD12-201ENST00000391002 90 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 SNORA75.2-201ENST00000391138 150 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 SNORA75.3-201ENST00000391231 150 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 AC092628.1-201ENST00000436250 252 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 RNU7-90P-201ENST00000459216 62 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 RNA5SP61-201ENST00000516453 100 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 RNU6-539P-201ENST00000516665 103 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.54□□□□□ -2.16
DDX1Q92499 MIR6082-201ENST00000613604 109 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 PVT1_3.1-201ENST00000620853 95 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 MIR1297-201ENST00000637311 77 ntBASIC1.54□□□□□ -2.16
DDX1Q92499 Y_RNA.13-201ENST00000362403 112 ntBASIC1.53□□□□□ -2.16
DDX1Q92499 SNORD26-201ENST00000384147 75 ntBASIC1.53□□□□□ -2.16
DDX1Q92499 SNORA25-201ENST00000384384 134 ntBASIC1.53□□□□□ -2.16
DDX1Q92499 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
DDX1Q92499 RNU6-380P-201ENST00000410207 107 ntBASIC1.53□□□□□ -2.16
DDX1Q92499 RNU7-21P-201ENST00000459430 62 ntBASIC1.53□□□□□ -2.16
DDX1Q92499 RNU6-765P-201ENST00000516916 99 ntBASIC1.53□□□□□ -2.16
DDX1Q92499 RNU6-303P-201ENST00000517091 106 ntBASIC1.53□□□□□ -2.16
DDX1Q92499 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.53□□□□□ -2.16
DDX1Q92499 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.17
DDX1Q92499 RNU6-208P-201ENST00000362431 107 ntBASIC1.52□□□□□ -2.17
DDX1Q92499 RNU6-403P-201ENST00000363163 104 ntBASIC1.52□□□□□ -2.17
DDX1Q92499 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.52□□□□□ -2.17
DDX1Q92499 RNU6-448P-201ENST00000517052 107 ntBASIC1.52□□□□□ -2.17
DDX1Q92499 AC036111.3-201ENST00000526389 112 ntBASIC1.52□□□□□ -2.17
DDX1Q92499 MIR548H5-201ENST00000580314 60 ntBASIC1.52□□□□□ -2.17
DDX1Q92499 TRDV1-202ENST00000621643 102 ntBASIC1.52□□□□□ -2.17
DDX1Q92499 Y_RNA.42-201ENST00000362660 108 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 SNORD113.3-201ENST00000364630 78 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 RNU6-1051P-201ENST00000365471 102 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 AC015818.7-201ENST00000428754 109 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 Y_RNA.809-201ENST00000516058 95 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 YWHAEP2-201ENST00000580066 112 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 MIR4696-201ENST00000581431 70 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 YWHAEP3-201ENST00000582767 121 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 MIR4484-201ENST00000582855 83 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 AC023934.1-201ENST00000574529 2389 ntBASIC1.51□□□□□ -2.17
DDX1Q92499 RNU5F-1-201ENST00000362507 117 ntBASIC1.5□□□□□ -2.17
DDX1Q92499 Y_RNA.374-201ENST00000365606 101 ntBASIC1.5□□□□□ -2.17
DDX1Q92499 RNU6-634P-201ENST00000459134 106 ntBASIC1.5□□□□□ -2.17
DDX1Q92499 RNU6-807P-201ENST00000516805 107 ntBASIC1.5□□□□□ -2.17
DDX1Q92499 RNU7-10P-201ENST00000607194 63 ntBASIC1.5□□□□□ -2.17
DDX1Q92499 MIR664A-201ENST00000626086 82 ntBASIC1.5□□□□□ -2.17
DDX1Q92499 MIR26B-201ENST00000362251 77 ntBASIC1.49□□□□□ -2.17
DDX1Q92499 Y_RNA.12-201ENST00000362393 112 ntBASIC1.49□□□□□ -2.17
DDX1Q92499 SNORA25.8-201ENST00000364831 128 ntBASIC1.49□□□□□ -2.17
DDX1Q92499 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
DDX1Q92499 SNORD111-201ENST00000408139 94 ntBASIC1.49□□□□□ -2.17
DDX1Q92499 SNORD83.1-201ENST00000411362 77 ntBASIC1.49□□□□□ -2.17
DDX1Q92499 MIR151B-201ENST00000584249 96 ntBASIC1.49□□□□□ -2.17
DDX1Q92499 U6.100-201ENST00000636230 99 ntBASIC1.49□□□□□ -2.17
DDX1Q92499 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
DDX1Q92499 MIR101-2-201ENST00000362195 79 ntBASIC1.48□□□□□ -2.17
DDX1Q92499 RNU6-664P-201ENST00000362381 107 ntBASIC1.48□□□□□ -2.17
DDX1Q92499 RNU6-369P-201ENST00000362515 102 ntBASIC1.48□□□□□ -2.17
DDX1Q92499 RNU6-934P-201ENST00000365154 107 ntBASIC1.48□□□□□ -2.17
DDX1Q92499 Y_RNA.386-201ENST00000383913 105 ntBASIC1.48□□□□□ -2.17
DDX1Q92499 MIR125B2-201ENST00000385128 89 ntBASIC1.48□□□□□ -2.17
DDX1Q92499 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
DDX1Q92499 MIR1257-201ENST00000408490 117 ntBASIC1.48□□□□□ -2.17
DDX1Q92499 RNU6-1265P-201ENST00000516342 103 ntBASIC1.48□□□□□ -2.17
DDX1Q92499 RNU6-70P-201ENST00000516438 60 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms