Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 7SK.8-201ENST00000612110 250 ntBASIC2.54□□□□□ -2
EFCAB3Q8N7B9 7SK.11-201ENST00000615477 250 ntBASIC2.54□□□□□ -2
EFCAB3Q8N7B9 7SK.13-201ENST00000622040 250 ntBASIC2.54□□□□□ -2
EFCAB3Q8N7B9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
EFCAB3Q8N7B9 MIR519E-201ENST00000385075 84 ntBASIC2.53□□□□□ -2
EFCAB3Q8N7B9 RNU7-21P-201ENST00000459430 62 ntBASIC2.53□□□□□ -2
EFCAB3Q8N7B9 AC080100.1-201ENST00000624239 5356 ntBASIC2.53□□□□□ -2
EFCAB3Q8N7B9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
EFCAB3Q8N7B9 Y_RNA.363-201ENST00000365529 113 ntBASIC2.52□□□□□ -2.01
EFCAB3Q8N7B9 SNORA80D-201ENST00000384488 135 ntBASIC2.52□□□□□ -2.01
EFCAB3Q8N7B9 RNA5SP148-201ENST00000516527 94 ntBASIC2.52□□□□□ -2.01
EFCAB3Q8N7B9 RNU6-54P-201ENST00000365563 107 ntBASIC2.51□□□□□ -2.01
EFCAB3Q8N7B9 MIR100-201ENST00000385259 80 ntBASIC2.51□□□□□ -2.01
EFCAB3Q8N7B9 RNU7-74P-201ENST00000459104 62 ntBASIC2.51□□□□□ -2.01
EFCAB3Q8N7B9 RNU7-104P-201ENST00000459398 79 ntBASIC2.51□□□□□ -2.01
EFCAB3Q8N7B9 AC067863.3-201ENST00000624172 122 ntBASIC2.51□□□□□ -2.01
EFCAB3Q8N7B9 MIR6073-201ENST00000352083 89 ntBASIC2.5□□□□□ -2.01
EFCAB3Q8N7B9 MIR1-1-201ENST00000362147 71 ntBASIC2.5□□□□□ -2.01
EFCAB3Q8N7B9 SNORA2.1-201ENST00000363089 137 ntBASIC2.5□□□□□ -2.01
EFCAB3Q8N7B9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
EFCAB3Q8N7B9 RNA5SP299-201ENST00000391203 116 ntBASIC2.5□□□□□ -2.01
EFCAB3Q8N7B9 RNU7-90P-201ENST00000459216 62 ntBASIC2.5□□□□□ -2.01
EFCAB3Q8N7B9 AL157834.3-201ENST00000615543 103 ntBASIC2.5□□□□□ -2.01
EFCAB3Q8N7B9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
EFCAB3Q8N7B9 Y_RNA.722-201ENST00000517279 114 ntBASIC2.49□□□□□ -2.01
EFCAB3Q8N7B9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.48□□□□□ -2.01
EFCAB3Q8N7B9 MIR3198-2-201ENST00000577868 80 ntBASIC2.48□□□□□ -2.01
EFCAB3Q8N7B9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
EFCAB3Q8N7B9 MIR520F-201ENST00000384824 87 ntBASIC2.47□□□□□ -2.01
EFCAB3Q8N7B9 MIR934-201ENST00000401241 83 ntBASIC2.47□□□□□ -2.01
EFCAB3Q8N7B9 RNA5SP402-201ENST00000517148 110 ntBASIC2.47□□□□□ -2.01
EFCAB3Q8N7B9 MIR4446-201ENST00000578505 67 ntBASIC2.47□□□□□ -2.01
EFCAB3Q8N7B9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
EFCAB3Q8N7B9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
EFCAB3Q8N7B9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
EFCAB3Q8N7B9 RNA5SP393-201ENST00000363423 117 ntBASIC2.46□□□□□ -2.02
EFCAB3Q8N7B9 RNU6-302P-201ENST00000365249 107 ntBASIC2.46□□□□□ -2.02
EFCAB3Q8N7B9 RNU6V-201ENST00000384105 107 ntBASIC2.46□□□□□ -2.02
EFCAB3Q8N7B9 MIR17-201ENST00000385012 84 ntBASIC2.46□□□□□ -2.02
EFCAB3Q8N7B9 RNU6-808P-201ENST00000391233 108 ntBASIC2.46□□□□□ -2.02
EFCAB3Q8N7B9 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
EFCAB3Q8N7B9 snoU13.15-201ENST00000459407 104 ntBASIC2.46□□□□□ -2.02
EFCAB3Q8N7B9 RNA5SP282-201ENST00000516355 108 ntBASIC2.46□□□□□ -2.02
EFCAB3Q8N7B9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
EFCAB3Q8N7B9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
EFCAB3Q8N7B9 RNU1-78P-201ENST00000391248 165 ntBASIC2.45□□□□□ -2.02
EFCAB3Q8N7B9 SUMO2P12-201ENST00000405924 140 ntBASIC2.45□□□□□ -2.02
EFCAB3Q8N7B9 SNORD42B-201ENST00000458893 67 ntBASIC2.45□□□□□ -2.02
EFCAB3Q8N7B9 RNU1-123P-201ENST00000458950 160 ntBASIC2.45□□□□□ -2.02
EFCAB3Q8N7B9 MIR6739-201ENST00000622461 75 ntBASIC2.45□□□□□ -2.02
EFCAB3Q8N7B9 FO624990.1-201ENST00000636373 85 ntBASIC2.45□□□□□ -2.02
EFCAB3Q8N7B9 SNORA3.2-201ENST00000408221 125 ntBASIC2.44□□□□□ -2.02
EFCAB3Q8N7B9 RNU6-135P-201ENST00000516769 101 ntBASIC2.44□□□□□ -2.02
EFCAB3Q8N7B9 RNU6-656P-201ENST00000516785 107 ntBASIC2.44□□□□□ -2.02
EFCAB3Q8N7B9 RNU6-122P-201ENST00000516818 107 ntBASIC2.44□□□□□ -2.02
EFCAB3Q8N7B9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
EFCAB3Q8N7B9 RNU6-446P-201ENST00000362827 106 ntBASIC2.43□□□□□ -2.02
EFCAB3Q8N7B9 RNU6-1089P-201ENST00000516473 104 ntBASIC2.43□□□□□ -2.02
EFCAB3Q8N7B9 MIR3938-201ENST00000582157 103 ntBASIC2.43□□□□□ -2.02
EFCAB3Q8N7B9 RNU6-92P-201ENST00000605893 104 ntBASIC2.43□□□□□ -2.02
EFCAB3Q8N7B9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.43□□□□□ -2.02
EFCAB3Q8N7B9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 MIR21-201ENST00000362134 72 ntBASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 MIR221-201ENST00000385135 110 ntBASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 RNU6-910P-201ENST00000390844 107 ntBASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 RNU4-53P-201ENST00000410828 140 ntBASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 snoU13.23-201ENST00000458863 104 ntBASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 AC108210.2-201ENST00000503681 201 ntBASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 MIR4422-201ENST00000581938 83 ntBASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 MIR5092-201ENST00000583139 88 ntBASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 ZNF355P-201ENST00000427301 3216 ntBASIC2.42□□□□□ -2.02
EFCAB3Q8N7B9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
EFCAB3Q8N7B9 MIR1827-201ENST00000408549 66 ntBASIC2.41□□□□□ -2.02
EFCAB3Q8N7B9 SNORD79.1-201ENST00000516069 84 ntBASIC2.41□□□□□ -2.02
EFCAB3Q8N7B9 Y_RNA.250-201ENST00000364542 110 ntBASIC2.4□□□□□ -2.03
EFCAB3Q8N7B9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.4□□□□□ -2.03
EFCAB3Q8N7B9 MIR4648-201ENST00000580107 72 ntBASIC2.4□□□□□ -2.03
EFCAB3Q8N7B9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
EFCAB3Q8N7B9 AL136317.1-201ENST00000612653 226 ntBASIC2.39□□□□□ -2.03
EFCAB3Q8N7B9 MIR7978-201ENST00000636158 59 ntBASIC2.39□□□□□ -2.03
EFCAB3Q8N7B9 MT-TY-201ENST00000387409 66 ntBASIC2.38□□□□□ -2.03
EFCAB3Q8N7B9 SNORD41.1-201ENST00000391000 69 ntBASIC2.38□□□□□ -2.03
EFCAB3Q8N7B9 RNU6-482P-201ENST00000391068 107 ntBASIC2.38□□□□□ -2.03
EFCAB3Q8N7B9 RMST_2.1-201ENST00000617263 136 ntBASIC2.38□□□□□ -2.03
EFCAB3Q8N7B9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
EFCAB3Q8N7B9 RNA5SP117-201ENST00000365294 118 ntBASIC2.37□□□□□ -2.03
EFCAB3Q8N7B9 RNA5SP233-201ENST00000459153 113 ntBASIC2.37□□□□□ -2.03
EFCAB3Q8N7B9 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
EFCAB3Q8N7B9 RNA5SP147-201ENST00000516493 109 ntBASIC2.37□□□□□ -2.03
EFCAB3Q8N7B9 MIR4639-201ENST00000584938 69 ntBASIC2.37□□□□□ -2.03
EFCAB3Q8N7B9 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
EFCAB3Q8N7B9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
EFCAB3Q8N7B9 SNORD114-4-201ENST00000363962 75 ntBASIC2.36□□□□□ -2.03
EFCAB3Q8N7B9 MIR27B-201ENST00000385129 97 ntBASIC2.36□□□□□ -2.03
EFCAB3Q8N7B9 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
EFCAB3Q8N7B9 Y_RNA.676-201ENST00000516393 96 ntBASIC2.36□□□□□ -2.03
EFCAB3Q8N7B9 SNORA40.17-201ENST00000517256 115 ntBASIC2.36□□□□□ -2.03
EFCAB3Q8N7B9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms