Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-1022P-201ENST00000365049 104 ntBASIC1.41□□□□□ -2.18
RNF111Q6ZNA4 SNORA25-201ENST00000384384 134 ntBASIC1.41□□□□□ -2.18
RNF111Q6ZNA4 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
RNF111Q6ZNA4 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
RNF111Q6ZNA4 MIR1827-201ENST00000408549 66 ntBASIC1.41□□□□□ -2.18
RNF111Q6ZNA4 RNA5SP247-201ENST00000411181 105 ntBASIC1.41□□□□□ -2.18
RNF111Q6ZNA4 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
RNF111Q6ZNA4 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
RNF111Q6ZNA4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RNF111Q6ZNA4 RNU6-1296P-201ENST00000383879 107 ntBASIC1.4□□□□□ -2.19
RNF111Q6ZNA4 SNORD101-201ENST00000384027 73 ntBASIC1.4□□□□□ -2.19
RNF111Q6ZNA4 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
RNF111Q6ZNA4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.4□□□□□ -2.19
RNF111Q6ZNA4 RNU6-664P-201ENST00000362381 107 ntBASIC1.39□□□□□ -2.19
RNF111Q6ZNA4 Y_RNA.239-201ENST00000364444 113 ntBASIC1.39□□□□□ -2.19
RNF111Q6ZNA4 AC108667.1-201ENST00000428618 249 ntBASIC1.39□□□□□ -2.19
RNF111Q6ZNA4 FGF7P7-201ENST00000514120 227 ntBASIC1.39□□□□□ -2.19
RNF111Q6ZNA4 RNU6-557P-201ENST00000516842 110 ntBASIC1.39□□□□□ -2.19
RNF111Q6ZNA4 MIR4303-201ENST00000581299 66 ntBASIC1.39□□□□□ -2.19
RNF111Q6ZNA4 MIR4696-201ENST00000581431 70 ntBASIC1.39□□□□□ -2.19
RNF111Q6ZNA4 RMST_2.1-201ENST00000617263 136 ntBASIC1.39□□□□□ -2.19
RNF111Q6ZNA4 Y_RNA.32-201ENST00000362589 110 ntBASIC1.38□□□□□ -2.19
RNF111Q6ZNA4 RNU6-686P-201ENST00000364839 107 ntBASIC1.38□□□□□ -2.19
RNF111Q6ZNA4 MIR520H-201ENST00000385126 88 ntBASIC1.38□□□□□ -2.19
RNF111Q6ZNA4 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
RNF111Q6ZNA4 SNORA31.14-201ENST00000516728 116 ntBASIC1.38□□□□□ -2.19
RNF111Q6ZNA4 MIRLET7A1-201ENST00000362295 80 ntBASIC1.37□□□□□ -2.19
RNF111Q6ZNA4 RNU6-1094P-201ENST00000362416 104 ntBASIC1.37□□□□□ -2.19
RNF111Q6ZNA4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RNF111Q6ZNA4 Y_RNA.596-201ENST00000410462 109 ntBASIC1.37□□□□□ -2.19
RNF111Q6ZNA4 AC244505.6-201ENST00000452829 130 ntBASIC1.37□□□□□ -2.19
RNF111Q6ZNA4 SNORA25.9-201ENST00000365087 128 ntBASIC1.36□□□□□ -2.19
RNF111Q6ZNA4 RNU6-1051P-201ENST00000365471 102 ntBASIC1.36□□□□□ -2.19
RNF111Q6ZNA4 SNORD89-201ENST00000390981 114 ntBASIC1.36□□□□□ -2.19
RNF111Q6ZNA4 SNORD77.2-201ENST00000391045 68 ntBASIC1.36□□□□□ -2.19
RNF111Q6ZNA4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.36□□□□□ -2.19
RNF111Q6ZNA4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.36□□□□□ -2.19
RNF111Q6ZNA4 AL359821.1-201ENST00000605519 182 ntBASIC1.36□□□□□ -2.19
RNF111Q6ZNA4 uc_338.16-201ENST00000621804 95 ntBASIC1.36□□□□□ -2.19
RNF111Q6ZNA4 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
RNF111Q6ZNA4 RNU6-208P-201ENST00000362431 107 ntBASIC1.35□□□□□ -2.19
RNF111Q6ZNA4 RNU4-62P-201ENST00000410125 130 ntBASIC1.35□□□□□ -2.19
RNF111Q6ZNA4 Y_RNA.660-201ENST00000516002 120 ntBASIC1.35□□□□□ -2.19
RNF111Q6ZNA4 AC145423.2-201ENST00000610631 239 ntBASIC1.35□□□□□ -2.19
RNF111Q6ZNA4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
RNF111Q6ZNA4 MIR378A-201ENST00000362177 66 ntBASIC1.34□□□□□ -2.19
RNF111Q6ZNA4 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
RNF111Q6ZNA4 MIR4498-201ENST00000577599 66 ntBASIC1.34□□□□□ -2.19
RNF111Q6ZNA4 MTRNR2L2-201ENST00000604882 87 ntBASIC1.34□□□□□ -2.19
RNF111Q6ZNA4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
RNF111Q6ZNA4 SNORD115-24-201ENST00000363528 82 ntBASIC1.33□□□□□ -2.2
RNF111Q6ZNA4 RNU6-1229P-201ENST00000364295 107 ntBASIC1.33□□□□□ -2.2
RNF111Q6ZNA4 RNU6-380P-201ENST00000410207 107 ntBASIC1.33□□□□□ -2.2
RNF111Q6ZNA4 snoU13.17-201ENST00000458802 104 ntBASIC1.33□□□□□ -2.2
RNF111Q6ZNA4 MIR3140-201ENST00000583685 90 ntBASIC1.33□□□□□ -2.2
RNF111Q6ZNA4 U7.4-201ENST00000614961 63 ntBASIC1.33□□□□□ -2.2
RNF111Q6ZNA4 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.33□□□□□ -2.2
RNF111Q6ZNA4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.32□□□□□ -2.2
RNF111Q6ZNA4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.32□□□□□ -2.2
RNF111Q6ZNA4 RNU6-935P-201ENST00000410371 100 ntBASIC1.32□□□□□ -2.2
RNF111Q6ZNA4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.32□□□□□ -2.2
RNF111Q6ZNA4 MIR4484-201ENST00000582855 83 ntBASIC1.32□□□□□ -2.2
RNF111Q6ZNA4 Y_RNA.788-201ENST00000622394 112 ntBASIC1.32□□□□□ -2.2
RNF111Q6ZNA4 RNU5F-1-201ENST00000362507 117 ntBASIC1.31□□□□□ -2.2
RNF111Q6ZNA4 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
RNF111Q6ZNA4 RNU6-1052P-201ENST00000411398 104 ntBASIC1.31□□□□□ -2.2
RNF111Q6ZNA4 SNORD124-201ENST00000459577 104 ntBASIC1.31□□□□□ -2.2
RNF111Q6ZNA4 RNU6-719P-201ENST00000516671 104 ntBASIC1.31□□□□□ -2.2
RNF111Q6ZNA4 AL136317.1-201ENST00000612653 226 ntBASIC1.31□□□□□ -2.2
RNF111Q6ZNA4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 Y_RNA.264-201ENST00000364665 102 ntBASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 RNY4P3-201ENST00000365254 95 ntBASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 MIR451A-201ENST00000385059 72 ntBASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 MIR644A-201ENST00000385262 94 ntBASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 SNORD105-201ENST00000386910 85 ntBASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 AP1B1P2-201ENST00000416196 106 ntBASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 SCARNA18B-201ENST00000458806 135 ntBASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 AC002350.1-201ENST00000490759 375 ntBASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RNF111Q6ZNA4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 MIR337-201ENST00000362281 93 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 RNA5SP117-201ENST00000365294 118 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 Y_RNA.532-201ENST00000384590 113 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 MIR942-201ENST00000401111 86 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 FABP5P4-201ENST00000437203 171 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 RNU7-104P-201ENST00000459398 79 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 RNU6-287P-201ENST00000516230 98 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 RNU7-13P-201ENST00000516413 62 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 snoU13.31-201ENST00000607291 104 ntBASIC1.29□□□□□ -2.2
RNF111Q6ZNA4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.28□□□□□ -2.2
RNF111Q6ZNA4 Y_RNA.12-201ENST00000362393 112 ntBASIC1.28□□□□□ -2.2
RNF111Q6ZNA4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.28□□□□□ -2.2
RNF111Q6ZNA4 SNORD26-201ENST00000384147 75 ntBASIC1.28□□□□□ -2.2
RNF111Q6ZNA4 Y_RNA.565-201ENST00000384719 101 ntBASIC1.28□□□□□ -2.2
RNF111Q6ZNA4 U7.7-201ENST00000459276 60 ntBASIC1.28□□□□□ -2.2
RNF111Q6ZNA4 RNU6-1057P-201ENST00000517162 102 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 312.9 ms