Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 U2.7-201ENST00000619197 100 ntBASIC3.26□□□□□ -1.89
SAMD1Q6SPF0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SAMD1Q6SPF0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SAMD1Q6SPF0 SNORA46-201ENST00000384762 135 ntBASIC3.25□□□□□ -1.89
SAMD1Q6SPF0 AL138827.1-201ENST00000402666 306 ntBASIC3.25□□□□□ -1.89
SAMD1Q6SPF0 AC079140.2-201ENST00000506193 142 ntBASIC3.25□□□□□ -1.89
SAMD1Q6SPF0 MIR3937-201ENST00000580135 106 ntBASIC3.25□□□□□ -1.89
SAMD1Q6SPF0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.24□□□□□ -1.89
SAMD1Q6SPF0 MIR100-201ENST00000385259 80 ntBASIC3.24□□□□□ -1.89
SAMD1Q6SPF0 UQCRHP3-201ENST00000451503 251 ntBASIC3.24□□□□□ -1.89
SAMD1Q6SPF0 RNU7-74P-201ENST00000459104 62 ntBASIC3.24□□□□□ -1.89
SAMD1Q6SPF0 RNA5SP233-201ENST00000459153 113 ntBASIC3.24□□□□□ -1.89
SAMD1Q6SPF0 RNU6-1065P-201ENST00000384513 106 ntBASIC3.23□□□□□ -1.89
SAMD1Q6SPF0 MT-TY-201ENST00000387409 66 ntBASIC3.23□□□□□ -1.89
SAMD1Q6SPF0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.23□□□□□ -1.89
SAMD1Q6SPF0 AL136317.1-201ENST00000612653 226 ntBASIC3.23□□□□□ -1.89
SAMD1Q6SPF0 AL773524.1-201ENST00000614065 229 ntBASIC3.23□□□□□ -1.89
SAMD1Q6SPF0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.23□□□□□ -1.89
SAMD1Q6SPF0 SNORD1A-201ENST00000364968 72 ntBASIC3.22□□□□□ -1.89
SAMD1Q6SPF0 MIR512-1-201ENST00000384913 84 ntBASIC3.22□□□□□ -1.89
SAMD1Q6SPF0 snoU13.9-201ENST00000458927 103 ntBASIC3.22□□□□□ -1.89
SAMD1Q6SPF0 snoU13.26-201ENST00000459452 105 ntBASIC3.22□□□□□ -1.89
SAMD1Q6SPF0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SAMD1Q6SPF0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SAMD1Q6SPF0 HMGN2P23-201ENST00000456759 269 ntBASIC3.21□□□□□ -1.9
SAMD1Q6SPF0 AC008413.1-201ENST00000511864 177 ntBASIC3.21□□□□□ -1.9
SAMD1Q6SPF0 MIR5694-201ENST00000581190 76 ntBASIC3.21□□□□□ -1.9
SAMD1Q6SPF0 AL359821.1-201ENST00000605519 182 ntBASIC3.21□□□□□ -1.9
SAMD1Q6SPF0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SAMD1Q6SPF0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.21□□□□□ -1.9
SAMD1Q6SPF0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SAMD1Q6SPF0 MIR302D-201ENST00000362275 68 ntBASIC3.2□□□□□ -1.9
SAMD1Q6SPF0 RNU6-859P-201ENST00000362728 107 ntBASIC3.2□□□□□ -1.9
SAMD1Q6SPF0 RNU4-33P-201ENST00000364316 85 ntBASIC3.2□□□□□ -1.9
SAMD1Q6SPF0 MIR520F-201ENST00000384824 87 ntBASIC3.2□□□□□ -1.9
SAMD1Q6SPF0 RN7SL75P-201ENST00000461926 281 ntBASIC3.2□□□□□ -1.9
SAMD1Q6SPF0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC3.2□□□□□ -1.9
SAMD1Q6SPF0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.2□□□□□ -1.9
SAMD1Q6SPF0 SNORD114-4-201ENST00000363962 75 ntBASIC3.19□□□□□ -1.9
SAMD1Q6SPF0 SNORA41B-201ENST00000384785 128 ntBASIC3.19□□□□□ -1.9
SAMD1Q6SPF0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SAMD1Q6SPF0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.18□□□□□ -1.9
SAMD1Q6SPF0 RNU6-231P-201ENST00000517122 103 ntBASIC3.18□□□□□ -1.9
SAMD1Q6SPF0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SAMD1Q6SPF0 MIR17-201ENST00000385012 84 ntBASIC3.17□□□□□ -1.9
SAMD1Q6SPF0 SNORA31.2-201ENST00000516019 134 ntBASIC3.17□□□□□ -1.9
SAMD1Q6SPF0 MIR4713-201ENST00000582691 75 ntBASIC3.17□□□□□ -1.9
SAMD1Q6SPF0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SAMD1Q6SPF0 MIR934-201ENST00000401241 83 ntBASIC3.16□□□□□ -1.9
SAMD1Q6SPF0 MIR548L-201ENST00000408303 86 ntBASIC3.16□□□□□ -1.9
SAMD1Q6SPF0 Y_RNA.676-201ENST00000516393 96 ntBASIC3.16□□□□□ -1.9
SAMD1Q6SPF0 Y_RNA.363-201ENST00000365529 113 ntBASIC3.15□□□□□ -1.91
SAMD1Q6SPF0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SAMD1Q6SPF0 SNORD116.2-201ENST00000391251 93 ntBASIC3.15□□□□□ -1.91
SAMD1Q6SPF0 AL512310.8-201ENST00000550183 120 ntBASIC3.15□□□□□ -1.91
SAMD1Q6SPF0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SAMD1Q6SPF0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SAMD1Q6SPF0 MIR1-1-201ENST00000362147 71 ntBASIC3.14□□□□□ -1.91
SAMD1Q6SPF0 SNORA33.1-201ENST00000364957 130 ntBASIC3.14□□□□□ -1.91
SAMD1Q6SPF0 MIR144-201ENST00000384886 86 ntBASIC3.14□□□□□ -1.91
SAMD1Q6SPF0 AL591704.2-201ENST00000421658 181 ntBASIC3.14□□□□□ -1.91
SAMD1Q6SPF0 RNA5SP148-201ENST00000516527 94 ntBASIC3.14□□□□□ -1.91
SAMD1Q6SPF0 RNU5B-6P-201ENST00000516765 68 ntBASIC3.14□□□□□ -1.91
SAMD1Q6SPF0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SAMD1Q6SPF0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC3.13□□□□□ -1.91
SAMD1Q6SPF0 RNA5SP21-201ENST00000410917 96 ntBASIC3.13□□□□□ -1.91
SAMD1Q6SPF0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.13□□□□□ -1.91
SAMD1Q6SPF0 MIR6817-201ENST00000615588 66 ntBASIC3.13□□□□□ -1.91
SAMD1Q6SPF0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SAMD1Q6SPF0 SNORD33-201ENST00000362761 85 ntBASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 Y_RNA.125-201ENST00000363371 111 ntBASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 Y_RNA.325-201ENST00000365171 122 ntBASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 MIR644A-201ENST00000385262 94 ntBASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 RNA5SP24-201ENST00000516478 95 ntBASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 MIR4287-201ENST00000579398 78 ntBASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 MIR3670-2-201ENST00000582974 65 ntBASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 MIR3670-1-201ENST00000584160 65 ntBASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 MIR3670-3-201ENST00000584855 65 ntBASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 MIR3670-4-201ENST00000612260 65 ntBASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SAMD1Q6SPF0 RNA5SP68-201ENST00000363885 119 ntBASIC3.11□□□□□ -1.91
SAMD1Q6SPF0 Y_RNA.246-201ENST00000364495 108 ntBASIC3.11□□□□□ -1.91
SAMD1Q6SPF0 RNA5SP210-201ENST00000391034 120 ntBASIC3.11□□□□□ -1.91
SAMD1Q6SPF0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.11□□□□□ -1.91
SAMD1Q6SPF0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC3.11□□□□□ -1.91
SAMD1Q6SPF0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SAMD1Q6SPF0 SNORD114-30-201ENST00000364448 72 ntBASIC3.1□□□□□ -1.91
SAMD1Q6SPF0 SNORA15B-2-201ENST00000384058 135 ntBASIC3.1□□□□□ -1.91
SAMD1Q6SPF0 SNORA15B-1-201ENST00000384334 135 ntBASIC3.1□□□□□ -1.91
SAMD1Q6SPF0 SNORD41.1-201ENST00000391000 69 ntBASIC3.1□□□□□ -1.91
SAMD1Q6SPF0 RPS29P6-201ENST00000438196 145 ntBASIC3.1□□□□□ -1.91
SAMD1Q6SPF0 RNU7-21P-201ENST00000459430 62 ntBASIC3.1□□□□□ -1.91
SAMD1Q6SPF0 RNU6-548P-201ENST00000517083 115 ntBASIC3.1□□□□□ -1.91
SAMD1Q6SPF0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SAMD1Q6SPF0 SNORA7.1-201ENST00000363750 139 ntBASIC3.09□□□□□ -1.91
SAMD1Q6SPF0 MIR9-1-201ENST00000385198 89 ntBASIC3.09□□□□□ -1.91
SAMD1Q6SPF0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC3.09□□□□□ -1.91
SAMD1Q6SPF0 RN7SKP88-201ENST00000516847 250 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms