Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 MIR548AL-201ENST00000578416 97 ntBASIC2.57□□□□□ -2
TRAF7Q6Q0C0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.57□□□□□ -2
TRAF7Q6Q0C0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TRAF7Q6Q0C0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRAF7Q6Q0C0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TRAF7Q6Q0C0 RNU6-924P-201ENST00000362926 108 ntBASIC2.56□□□□□ -2
TRAF7Q6Q0C0 MIR18B-201ENST00000454574 71 ntBASIC2.56□□□□□ -2
TRAF7Q6Q0C0 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
TRAF7Q6Q0C0 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
TRAF7Q6Q0C0 MIR216B-201ENST00000390186 82 ntBASIC2.55□□□□□ -2
TRAF7Q6Q0C0 AL161935.2-201ENST00000414627 60 ntBASIC2.55□□□□□ -2
TRAF7Q6Q0C0 MIR4490-201ENST00000582647 84 ntBASIC2.55□□□□□ -2
TRAF7Q6Q0C0 SNRPGP19-201ENST00000603826 189 ntBASIC2.55□□□□□ -2
TRAF7Q6Q0C0 Y_RNA.246-201ENST00000364495 108 ntBASIC2.54□□□□□ -2
TRAF7Q6Q0C0 AL603825.1-201ENST00000438481 80 ntBASIC2.54□□□□□ -2
TRAF7Q6Q0C0 RNU6-922P-201ENST00000516753 99 ntBASIC2.54□□□□□ -2
TRAF7Q6Q0C0 RNU6-1126P-201ENST00000384002 107 ntBASIC2.53□□□□□ -2
TRAF7Q6Q0C0 SNORA31.11-201ENST00000516528 139 ntBASIC2.53□□□□□ -2
TRAF7Q6Q0C0 AC018659.1-201ENST00000551083 169 ntBASIC2.53□□□□□ -2
TRAF7Q6Q0C0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
TRAF7Q6Q0C0 SNORA67.1-201ENST00000364749 141 ntBASIC2.52□□□□□ -2.01
TRAF7Q6Q0C0 SNORA64-201ENST00000384674 134 ntBASIC2.52□□□□□ -2.01
TRAF7Q6Q0C0 RNU6-1246P-201ENST00000391064 107 ntBASIC2.52□□□□□ -2.01
TRAF7Q6Q0C0 RNU7-185P-201ENST00000459215 60 ntBASIC2.52□□□□□ -2.01
TRAF7Q6Q0C0 MIR2115-201ENST00000516657 100 ntBASIC2.52□□□□□ -2.01
TRAF7Q6Q0C0 RNU6-765P-201ENST00000516916 99 ntBASIC2.52□□□□□ -2.01
TRAF7Q6Q0C0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 Y_RNA.250-201ENST00000364542 110 ntBASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 RNU6-580P-201ENST00000365159 107 ntBASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 snoU13.13-201ENST00000458842 104 ntBASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 RN7SL274P-201ENST00000492268 272 ntBASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 MIR4287-201ENST00000579398 78 ntBASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 AL049779.4-201ENST00000604500 156 ntBASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 GHRLOS.1-201ENST00000610995 70 ntBASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 AL773524.1-201ENST00000614065 229 ntBASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 MIR6516-201ENST00000630554 81 ntBASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRAF7Q6Q0C0 MIR21-201ENST00000362134 72 ntBASIC2.5□□□□□ -2.01
TRAF7Q6Q0C0 SNORA9.1-201ENST00000362412 131 ntBASIC2.5□□□□□ -2.01
TRAF7Q6Q0C0 RNU6-822P-201ENST00000362707 106 ntBASIC2.5□□□□□ -2.01
TRAF7Q6Q0C0 SNORA6-201ENST00000384033 151 ntBASIC2.5□□□□□ -2.01
TRAF7Q6Q0C0 RNU6V-201ENST00000384105 107 ntBASIC2.5□□□□□ -2.01
TRAF7Q6Q0C0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
TRAF7Q6Q0C0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 SNORA67.3-201ENST00000384366 140 ntBASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 SNORD116-16-201ENST00000384533 92 ntBASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 SNORD41-201ENST00000386967 70 ntBASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 AC244505.6-201ENST00000452829 130 ntBASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 AC067940.1-201ENST00000458411 300 ntBASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 snoU13.25-201ENST00000458945 104 ntBASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 AC108210.2-201ENST00000503681 201 ntBASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 RNU7-13P-201ENST00000516413 62 ntBASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 RNU6-548P-201ENST00000517083 115 ntBASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 MIR8074-201ENST00000615081 81 ntBASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRAF7Q6Q0C0 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
TRAF7Q6Q0C0 MIR377-201ENST00000362145 69 ntBASIC2.48□□□□□ -2.01
TRAF7Q6Q0C0 RNU6-439P-201ENST00000384188 106 ntBASIC2.48□□□□□ -2.01
TRAF7Q6Q0C0 MIR221-201ENST00000385135 110 ntBASIC2.48□□□□□ -2.01
TRAF7Q6Q0C0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TRAF7Q6Q0C0 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.48□□□□□ -2.01
TRAF7Q6Q0C0 RNA5SP95-201ENST00000410319 137 ntBASIC2.48□□□□□ -2.01
TRAF7Q6Q0C0 RNA5SP94-201ENST00000516917 108 ntBASIC2.48□□□□□ -2.01
TRAF7Q6Q0C0 MIR4713-201ENST00000582691 75 ntBASIC2.48□□□□□ -2.01
TRAF7Q6Q0C0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRAF7Q6Q0C0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.47□□□□□ -2.01
TRAF7Q6Q0C0 RNA5SP99-201ENST00000364020 114 ntBASIC2.47□□□□□ -2.01
TRAF7Q6Q0C0 HMGN2P23-201ENST00000456759 269 ntBASIC2.47□□□□□ -2.01
TRAF7Q6Q0C0 RNU7-74P-201ENST00000459104 62 ntBASIC2.47□□□□□ -2.01
TRAF7Q6Q0C0 MIR6873-201ENST00000622788 63 ntBASIC2.47□□□□□ -2.01
TRAF7Q6Q0C0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.46□□□□□ -2.02
TRAF7Q6Q0C0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRAF7Q6Q0C0 Y_RNA.125-201ENST00000363371 111 ntBASIC2.46□□□□□ -2.02
TRAF7Q6Q0C0 RNA5SP393-201ENST00000363423 117 ntBASIC2.46□□□□□ -2.02
TRAF7Q6Q0C0 MIR617-201ENST00000385030 97 ntBASIC2.46□□□□□ -2.02
TRAF7Q6Q0C0 RNU6-482P-201ENST00000391068 107 ntBASIC2.46□□□□□ -2.02
TRAF7Q6Q0C0 AC008608.1-201ENST00000603910 127 ntBASIC2.46□□□□□ -2.02
TRAF7Q6Q0C0 AL137847.3-201ENST00000611521 109 ntBASIC2.46□□□□□ -2.02
TRAF7Q6Q0C0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.45□□□□□ -2.02
TRAF7Q6Q0C0 RNU6-535P-201ENST00000384722 107 ntBASIC2.45□□□□□ -2.02
TRAF7Q6Q0C0 MIR519E-201ENST00000385075 84 ntBASIC2.45□□□□□ -2.02
TRAF7Q6Q0C0 RNA5SP402-201ENST00000517148 110 ntBASIC2.45□□□□□ -2.02
TRAF7Q6Q0C0 MIR6766-201ENST00000622641 72 ntBASIC2.45□□□□□ -2.02
TRAF7Q6Q0C0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 SNORA33.1-201ENST00000364957 130 ntBASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 MIR1257-201ENST00000408490 117 ntBASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 snoU13.21-201ENST00000459368 105 ntBASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 RNU6-947P-201ENST00000516264 106 ntBASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 RNA5SP82-201ENST00000516707 92 ntBASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 AP003716.2-201ENST00000528260 108 ntBASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 AL645939.4-201ENST00000604495 135 ntBASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRAF7Q6Q0C0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 426.3 ms