Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 Y_RNA.68-201ENST00000362881 102 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 RNU6-1260P-201ENST00000362944 107 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 Y_RNA.239-201ENST00000364444 113 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 AC092628.1-201ENST00000436250 252 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 SNORA31.2-201ENST00000516019 134 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 AC036111.3-201ENST00000526389 112 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 MIR4696-201ENST00000581431 70 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 AC005520.4-201ENST00000604337 90 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 U6.100-201ENST00000636230 99 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 MIR125B2-201ENST00000385128 89 ntBASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 RNU6-1054P-201ENST00000411293 104 ntBASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 RPS27P16-201ENST00000425758 201 ntBASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 AC023827.1-201ENST00000569247 97 ntBASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 RNU6-664P-201ENST00000362381 107 ntBASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 SNORA75.2-201ENST00000391138 150 ntBASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 SNORA75.3-201ENST00000391231 150 ntBASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 RNU6-765P-201ENST00000516916 99 ntBASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 SNORD101-201ENST00000384027 73 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 Y_RNA.433-201ENST00000384089 102 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 SNORD111-201ENST00000408139 94 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 Y_RNA.606-201ENST00000410579 103 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 AC003989.2-201ENST00000440224 169 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 RNA5SP402-201ENST00000517148 110 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 RNY4P3-201ENST00000365254 95 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 RNU6-364P-201ENST00000384387 107 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 RNU1-40P-201ENST00000516816 164 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 RNU1-97P-201ENST00000516872 164 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 MIR5089-201ENST00000580047 84 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 MTRNR2L2-201ENST00000604882 87 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 RNU1-78P-201ENST00000391248 165 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 RNA5SP489-201ENST00000410986 109 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 AL591704.2-201ENST00000421658 181 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 MIR4422-201ENST00000581938 83 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 MIR3675-201ENST00000583661 73 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 MIR9-2-201ENST00000384838 87 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 MIR934-201ENST00000401241 83 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-994P-201ENST00000410507 111 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 RPS26P5-201ENST00000418544 335 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 AC138907.6-201ENST00000568401 126 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 AC138869.1-201ENST00000568623 124 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 AC106800.4-201ENST00000614905 153 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-681P-201ENST00000364012 104 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 SNORA24B-201ENST00000384176 131 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 SNORD45A-201ENST00000384512 84 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-630P-201ENST00000391258 106 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 RNU7-40P-201ENST00000516397 64 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 AC084768.2-201ENST00000622736 221 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 MIR21-201ENST00000362134 72 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-824P-201ENST00000363724 104 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 MIR599-201ENST00000385069 95 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 AC097635.1-201ENST00000450678 155 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 AC097510.1-201ENST00000510945 133 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 AC008834.1-201ENST00000511612 175 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 MIR4676-201ENST00000583078 72 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 U6.81-201ENST00000612550 106 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-535P-201ENST00000384722 107 ntBASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-987P-201ENST00000384759 104 ntBASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 MTND4LP19-201ENST00000403051 166 ntBASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 AC093423.1-201ENST00000440817 142 ntBASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PRPF38BQ5VTL8 SNORD115-22-201ENST00000364456 82 ntBASIC2.16□□□□□ -2.06
PRPF38BQ5VTL8 MIR938-201ENST00000401216 83 ntBASIC2.16□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-1052P-201ENST00000411398 104 ntBASIC2.16□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-719P-201ENST00000516671 104 ntBASIC2.16□□□□□ -2.06
PRPF38BQ5VTL8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.06
PRPF38BQ5VTL8 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 Y_RNA.363-201ENST00000365529 113 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-895P-201ENST00000384125 103 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 Y_RNA.443-201ENST00000384135 111 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 SNORA80D-201ENST00000384488 135 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-910P-201ENST00000390844 107 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-935P-201ENST00000410371 100 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 AC027335.2-201ENST00000624030 375 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 288.1 ms