Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 SNORD115-24-201ENST00000363528 82 ntBASIC0.75□□□□□ -2.29
KHDC1Q4VXA5 RNA5SP94-201ENST00000516917 108 ntBASIC0.75□□□□□ -2.29
KHDC1Q4VXA5 RNU6-158P-201ENST00000517104 100 ntBASIC0.75□□□□□ -2.29
KHDC1Q4VXA5 RNA5SP47-201ENST00000517230 109 ntBASIC0.75□□□□□ -2.29
KHDC1Q4VXA5 MIR548Z-201ENST00000584743 97 ntBASIC0.75□□□□□ -2.29
KHDC1Q4VXA5 RNU6-32P-201ENST00000383948 107 ntBASIC0.74□□□□□ -2.29
KHDC1Q4VXA5 RNU6-13P-201ENST00000384248 107 ntBASIC0.74□□□□□ -2.29
KHDC1Q4VXA5 RNU6-12P-201ENST00000384604 107 ntBASIC0.74□□□□□ -2.29
KHDC1Q4VXA5 RNU6-41P-201ENST00000384741 107 ntBASIC0.74□□□□□ -2.29
KHDC1Q4VXA5 Y_RNA.705-201ENST00000516862 110 ntBASIC0.74□□□□□ -2.29
KHDC1Q4VXA5 AC022709.1-201ENST00000615967 87 ntBASIC0.74□□□□□ -2.29
KHDC1Q4VXA5 AC244669.1-204ENST00000621564 178 ntBASIC0.74□□□□□ -2.29
KHDC1Q4VXA5 RNY1P8-201ENST00000383970 114 ntBASIC0.73□□□□□ -2.29
KHDC1Q4VXA5 RNU6-972P-201ENST00000391208 107 ntBASIC0.73□□□□□ -2.29
KHDC1Q4VXA5 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
KHDC1Q4VXA5 AC103810.7-201ENST00000607821 91 ntBASIC0.73□□□□□ -2.29
KHDC1Q4VXA5 AP001318.4-201ENST00000616637 121 ntBASIC0.73□□□□□ -2.29
KHDC1Q4VXA5 MIR2052-201ENST00000636055 55 ntBASIC0.73□□□□□ -2.29
KHDC1Q4VXA5 RNA5SP403-201ENST00000363598 108 ntBASIC0.72□□□□□ -2.29
KHDC1Q4VXA5 Y_RNA.221-201ENST00000364248 96 ntBASIC0.72□□□□□ -2.29
KHDC1Q4VXA5 RNU6-153P-201ENST00000364422 104 ntBASIC0.72□□□□□ -2.29
KHDC1Q4VXA5 RNU6-524P-201ENST00000384270 107 ntBASIC0.72□□□□□ -2.29
KHDC1Q4VXA5 RNU6-644P-201ENST00000391155 98 ntBASIC0.72□□□□□ -2.29
KHDC1Q4VXA5 SCARNA16.5-201ENST00000517114 183 ntBASIC0.72□□□□□ -2.29
KHDC1Q4VXA5 MIR6515-201ENST00000619843 57 ntBASIC0.72□□□□□ -2.29
KHDC1Q4VXA5 MIR6828-201ENST00000636181 60 ntBASIC0.72□□□□□ -2.29
KHDC1Q4VXA5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.72□□□□□ -2.29
KHDC1Q4VXA5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
KHDC1Q4VXA5 Y_RNA.495-201ENST00000384435 112 ntBASIC0.71□□□□□ -2.3
KHDC1Q4VXA5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
KHDC1Q4VXA5 RNU6-887P-201ENST00000410660 100 ntBASIC0.71□□□□□ -2.3
KHDC1Q4VXA5 MTATP8P2-201ENST00000435212 202 ntBASIC0.71□□□□□ -2.3
KHDC1Q4VXA5 RNU7-161P-201ENST00000517289 62 ntBASIC0.71□□□□□ -2.3
KHDC1Q4VXA5 AL513043.2-201ENST00000573941 143 ntBASIC0.71□□□□□ -2.3
KHDC1Q4VXA5 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
KHDC1Q4VXA5 AC025521.1-201ENST00000621624 286 ntBASIC0.7□□□□□ -2.3
KHDC1Q4VXA5 SNORA36.1-201ENST00000363424 132 ntBASIC0.69□□□□□ -2.3
KHDC1Q4VXA5 SNORA40.13-201ENST00000516379 120 ntBASIC0.69□□□□□ -2.3
KHDC1Q4VXA5 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
KHDC1Q4VXA5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.69□□□□□ -2.3
KHDC1Q4VXA5 AC092634.7-201ENST00000621022 103 ntBASIC0.69□□□□□ -2.3
KHDC1Q4VXA5 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
KHDC1Q4VXA5 RNA5SP517-201ENST00000364724 117 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 SNORD58A-201ENST00000383875 65 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 Y_RNA.648-201ENST00000459455 110 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 RNU7-61P-201ENST00000515897 61 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 RNU6-1265P-201ENST00000516342 103 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 RNA5SP268-201ENST00000516828 124 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 AC018659.1-201ENST00000551083 169 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 MIR5000-201ENST00000577717 103 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 AC067863.3-201ENST00000624172 122 ntBASIC0.68□□□□□ -2.3
KHDC1Q4VXA5 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
KHDC1Q4VXA5 Y_RNA.348-201ENST00000365403 103 ntBASIC0.66□□□□□ -2.3
KHDC1Q4VXA5 SNORA8.2-201ENST00000384372 139 ntBASIC0.66□□□□□ -2.3
KHDC1Q4VXA5 MIR598-201ENST00000384868 97 ntBASIC0.66□□□□□ -2.3
KHDC1Q4VXA5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.66□□□□□ -2.3
KHDC1Q4VXA5 RNU7-104P-201ENST00000459398 79 ntBASIC0.66□□□□□ -2.3
KHDC1Q4VXA5 RNU6-957P-201ENST00000363652 99 ntBASIC0.65□□□□□ -2.31
KHDC1Q4VXA5 RNU6-466P-201ENST00000391224 103 ntBASIC0.65□□□□□ -2.31
KHDC1Q4VXA5 SNORA40.8-201ENST00000411034 126 ntBASIC0.65□□□□□ -2.31
KHDC1Q4VXA5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.65□□□□□ -2.31
KHDC1Q4VXA5 RNA5SP227-201ENST00000516184 113 ntBASIC0.65□□□□□ -2.31
KHDC1Q4VXA5 TRDV1-202ENST00000621643 102 ntBASIC0.65□□□□□ -2.31
KHDC1Q4VXA5 SNORD116-10-201ENST00000363791 102 ntBASIC0.64□□□□□ -2.31
KHDC1Q4VXA5 RNU6-726P-201ENST00000364680 107 ntBASIC0.64□□□□□ -2.31
KHDC1Q4VXA5 snoU13.11-201ENST00000459219 104 ntBASIC0.64□□□□□ -2.31
KHDC1Q4VXA5 RNU6-168P-201ENST00000516189 101 ntBASIC0.64□□□□□ -2.31
KHDC1Q4VXA5 RN7SKP12-201ENST00000516275 143 ntBASIC0.64□□□□□ -2.31
KHDC1Q4VXA5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 SNORD118-201ENST00000363593 134 ntBASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 Y_RNA.283-201ENST00000364798 112 ntBASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 SNORD115-44-201ENST00000365391 82 ntBASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 SNORD41.1-201ENST00000391000 69 ntBASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 RNA5SP436-201ENST00000516020 115 ntBASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 Y_RNA.677-201ENST00000516401 85 ntBASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 RNU7-13P-201ENST00000516413 62 ntBASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 U7.3-201ENST00000616123 62 ntBASIC0.63□□□□□ -2.31
KHDC1Q4VXA5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
KHDC1Q4VXA5 MIR518A1-201ENST00000385068 85 ntBASIC0.62□□□□□ -2.31
KHDC1Q4VXA5 MIR548L-201ENST00000408303 86 ntBASIC0.62□□□□□ -2.31
KHDC1Q4VXA5 MIR3920-201ENST00000581751 86 ntBASIC0.62□□□□□ -2.31
KHDC1Q4VXA5 PVT1_3.1-201ENST00000620853 95 ntBASIC0.62□□□□□ -2.31
KHDC1Q4VXA5 RNA5SP499-201ENST00000363982 119 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 RNU6-905P-201ENST00000384434 107 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 Y_RNA.540-201ENST00000384638 111 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 RNA5SP89-201ENST00000410300 108 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 Y_RNA.596-201ENST00000410462 109 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 AL161932.1-201ENST00000437408 146 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 RNA5SP480-201ENST00000516840 109 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 MIR7107-201ENST00000611489 80 ntBASIC0.61□□□□□ -2.31
KHDC1Q4VXA5 RNU6-716P-201ENST00000365621 103 ntBASIC0.6□□□□□ -2.31
KHDC1Q4VXA5 RNU6-162P-201ENST00000516228 103 ntBASIC0.6□□□□□ -2.31
KHDC1Q4VXA5 MIR4536-1-201ENST00000583537 88 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms