Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR378A-201ENST00000362177 66 ntBASIC1.68□□□□□ -2.14
SOX4Q06945 RNU5F-1-201ENST00000362507 117 ntBASIC1.68□□□□□ -2.14
SOX4Q06945 RNY4P3-201ENST00000365254 95 ntBASIC1.68□□□□□ -2.14
SOX4Q06945 MIR938-201ENST00000401216 83 ntBASIC1.68□□□□□ -2.14
SOX4Q06945 AP1B1P2-201ENST00000416196 106 ntBASIC1.68□□□□□ -2.14
SOX4Q06945 MTRNR2L2-201ENST00000604882 87 ntBASIC1.68□□□□□ -2.14
SOX4Q06945 AC027335.2-201ENST00000624030 375 ntBASIC1.68□□□□□ -2.14
SOX4Q06945 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SOX4Q06945 SNORA80D-201ENST00000384488 135 ntBASIC1.67□□□□□ -2.14
SOX4Q06945 RNU6-291P-201ENST00000384720 107 ntBASIC1.67□□□□□ -2.14
SOX4Q06945 Y_RNA.596-201ENST00000410462 109 ntBASIC1.67□□□□□ -2.14
SOX4Q06945 RNU6-1015P-201ENST00000517121 99 ntBASIC1.67□□□□□ -2.14
SOX4Q06945 MIR3140-201ENST00000583685 90 ntBASIC1.67□□□□□ -2.14
SOX4Q06945 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
SOX4Q06945 MIR7111-201ENST00000619751 72 ntBASIC1.67□□□□□ -2.14
SOX4Q06945 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.67□□□□□ -2.14
SOX4Q06945 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SOX4Q06945 ZNF209P-201ENST00000593450 2304 ntBASIC1.66□□□□□ -2.14
SOX4Q06945 RNU6-910P-201ENST00000390844 107 ntBASIC1.66□□□□□ -2.14
SOX4Q06945 RNU7-102P-201ENST00000458948 62 ntBASIC1.66□□□□□ -2.14
SOX4Q06945 RNU7-95P-201ENST00000459222 64 ntBASIC1.66□□□□□ -2.14
SOX4Q06945 RNU6-902P-201ENST00000517212 91 ntBASIC1.66□□□□□ -2.14
SOX4Q06945 MIR4498-201ENST00000577599 66 ntBASIC1.66□□□□□ -2.14
SOX4Q06945 RNU6-369P-201ENST00000362515 102 ntBASIC1.65□□□□□ -2.15
SOX4Q06945 Y_RNA.338-201ENST00000365320 114 ntBASIC1.65□□□□□ -2.15
SOX4Q06945 RNU7-90P-201ENST00000459216 62 ntBASIC1.65□□□□□ -2.15
SOX4Q06945 RNU6-871P-201ENST00000516122 100 ntBASIC1.65□□□□□ -2.15
SOX4Q06945 SNORD53B-201ENST00000577887 78 ntBASIC1.65□□□□□ -2.15
SOX4Q06945 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
SOX4Q06945 AC008608.1-201ENST00000603910 127 ntBASIC1.65□□□□□ -2.15
SOX4Q06945 MIR664A-201ENST00000626086 82 ntBASIC1.65□□□□□ -2.15
SOX4Q06945 Y_RNA.371-201ENST00000365591 113 ntBASIC1.64□□□□□ -2.15
SOX4Q06945 RNU6-994P-201ENST00000410507 111 ntBASIC1.64□□□□□ -2.15
SOX4Q06945 RNU6-1265P-201ENST00000516342 103 ntBASIC1.64□□□□□ -2.15
SOX4Q06945 RNU6-977P-201ENST00000516411 103 ntBASIC1.64□□□□□ -2.15
SOX4Q06945 RNU6-687P-201ENST00000516443 89 ntBASIC1.64□□□□□ -2.15
SOX4Q06945 MIR4804-201ENST00000581683 73 ntBASIC1.64□□□□□ -2.15
SOX4Q06945 snoU13.31-201ENST00000607291 104 ntBASIC1.64□□□□□ -2.15
SOX4Q06945 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.63□□□□□ -2.15
SOX4Q06945 RNU6-935P-201ENST00000410371 100 ntBASIC1.63□□□□□ -2.15
SOX4Q06945 RNU7-56P-201ENST00000458744 62 ntBASIC1.63□□□□□ -2.15
SOX4Q06945 SNORD79.1-201ENST00000516069 84 ntBASIC1.63□□□□□ -2.15
SOX4Q06945 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.63□□□□□ -2.15
SOX4Q06945 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SOX4Q06945 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SOX4Q06945 RNU6-340P-201ENST00000364005 107 ntBASIC1.62□□□□□ -2.15
SOX4Q06945 MIR100-201ENST00000385259 80 ntBASIC1.62□□□□□ -2.15
SOX4Q06945 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
SOX4Q06945 RNU6-1052P-201ENST00000411398 104 ntBASIC1.62□□□□□ -2.15
SOX4Q06945 AC244505.6-201ENST00000452829 130 ntBASIC1.62□□□□□ -2.15
SOX4Q06945 RNU6-719P-201ENST00000516671 104 ntBASIC1.62□□□□□ -2.15
SOX4Q06945 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.61□□□□□ -2.15
SOX4Q06945 MIR1-1-201ENST00000362147 71 ntBASIC1.61□□□□□ -2.15
SOX4Q06945 RNU6-590P-201ENST00000365039 107 ntBASIC1.61□□□□□ -2.15
SOX4Q06945 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
SOX4Q06945 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.61□□□□□ -2.15
SOX4Q06945 RNU6-539P-201ENST00000516665 103 ntBASIC1.61□□□□□ -2.15
SOX4Q06945 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SOX4Q06945 Y_RNA.36-201ENST00000362602 112 ntBASIC1.6□□□□□ -2.15
SOX4Q06945 RNU6-330P-201ENST00000363015 107 ntBASIC1.6□□□□□ -2.15
SOX4Q06945 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
SOX4Q06945 SNORA8.1-201ENST00000384250 140 ntBASIC1.6□□□□□ -2.15
SOX4Q06945 MIR451A-201ENST00000385059 72 ntBASIC1.6□□□□□ -2.15
SOX4Q06945 RNU1-119P-201ENST00000391122 165 ntBASIC1.6□□□□□ -2.15
SOX4Q06945 RNU6-587P-201ENST00000391282 106 ntBASIC1.6□□□□□ -2.15
SOX4Q06945 RNU6-634P-201ENST00000459134 106 ntBASIC1.6□□□□□ -2.15
SOX4Q06945 RNU6-154P-201ENST00000384306 106 ntBASIC1.59□□□□□ -2.15
SOX4Q06945 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SOX4Q06945 MIR942-201ENST00000401111 86 ntBASIC1.59□□□□□ -2.15
SOX4Q06945 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
SOX4Q06945 AL354695.1-201ENST00000427935 228 ntBASIC1.59□□□□□ -2.15
SOX4Q06945 AC097510.1-201ENST00000510945 133 ntBASIC1.59□□□□□ -2.15
SOX4Q06945 SNORA31.24-201ENST00000517232 57 ntBASIC1.59□□□□□ -2.15
SOX4Q06945 AL157834.3-201ENST00000615543 103 ntBASIC1.59□□□□□ -2.15
SOX4Q06945 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
SOX4Q06945 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
SOX4Q06945 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SOX4Q06945 RNU6-681P-201ENST00000364012 104 ntBASIC1.58□□□□□ -2.16
SOX4Q06945 SNORA24B-201ENST00000384176 131 ntBASIC1.58□□□□□ -2.16
SOX4Q06945 RNU2-59P-201ENST00000410482 191 ntBASIC1.58□□□□□ -2.16
SOX4Q06945 Y_RNA.606-201ENST00000410579 103 ntBASIC1.58□□□□□ -2.16
SOX4Q06945 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.58□□□□□ -2.16
SOX4Q06945 RNU6-287P-201ENST00000516230 98 ntBASIC1.58□□□□□ -2.16
SOX4Q06945 SNORA70.22-201ENST00000517160 124 ntBASIC1.58□□□□□ -2.16
SOX4Q06945 RNU6-1057P-201ENST00000517162 102 ntBASIC1.58□□□□□ -2.16
SOX4Q06945 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
SOX4Q06945 RNU6-1241P-201ENST00000384536 107 ntBASIC1.57□□□□□ -2.16
SOX4Q06945 MIR520F-201ENST00000384824 87 ntBASIC1.57□□□□□ -2.16
SOX4Q06945 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SOX4Q06945 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.57□□□□□ -2.16
SOX4Q06945 AL359821.1-201ENST00000605519 182 ntBASIC1.57□□□□□ -2.16
SOX4Q06945 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.57□□□□□ -2.16
SOX4Q06945 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
SOX4Q06945 RNU6-1053P-201ENST00000515930 101 ntBASIC1.56□□□□□ -2.16
SOX4Q06945 SNORA31.14-201ENST00000516728 116 ntBASIC1.56□□□□□ -2.16
SOX4Q06945 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.56□□□□□ -2.16
SOX4Q06945 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.56□□□□□ -2.16
SOX4Q06945 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.56□□□□□ -2.16
SOX4Q06945 uc_338.16-201ENST00000621804 95 ntBASIC1.56□□□□□ -2.16
SOX4Q06945 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 267 ms