Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MIR1302-11-201ENST00000408051 138 ntBASIC-2.08□□□□□ -2.74
HIST1H3AP68431 MIR1302-9-201ENST00000408365 138 ntBASIC-2.08□□□□□ -2.74
HIST1H3AP68431 MIR1302-10-201ENST00000408734 138 ntBASIC-2.08□□□□□ -2.74
HIST1H3AP68431 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.08□□□□□ -2.74
HIST1H3AP68431 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.08□□□□□ -2.74
HIST1H3AP68431 MIR1302-2-201ENST00000607096 138 ntBASIC-2.08□□□□□ -2.74
HIST1H3AP68431 AP000770.2-201ENST00000623694 100 ntBASIC-2.08□□□□□ -2.74
HIST1H3AP68431 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.09□□□□□ -2.74
HIST1H3AP68431 RNU4-17P-201ENST00000365598 141 ntBASIC-2.09□□□□□ -2.74
HIST1H3AP68431 AC092794.1-201ENST00000612734 582 ntBASIC-2.09□□□□□ -2.74
HIST1H3AP68431 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.1□□□□□ -2.75
HIST1H3AP68431 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.1□□□□□ -2.75
HIST1H3AP68431 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.1□□□□□ -2.75
HIST1H3AP68431 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.1□□□□□ -2.75
HIST1H3AP68431 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.1□□□□□ -2.75
HIST1H3AP68431 FGF7P7-201ENST00000514120 227 ntBASIC-2.1□□□□□ -2.75
HIST1H3AP68431 RNU6-976P-201ENST00000516086 111 ntBASIC-2.1□□□□□ -2.75
HIST1H3AP68431 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.11□□□□□ -2.75
HIST1H3AP68431 U3.27-201ENST00000391237 200 ntBASIC-2.11□□□□□ -2.75
HIST1H3AP68431 MIR548H1-201ENST00000408610 102 ntBASIC-2.11□□□□□ -2.75
HIST1H3AP68431 FGF7P6-202ENST00000451282 293 ntBASIC-2.11□□□□□ -2.75
HIST1H3AP68431 SNORA40.15-201ENST00000516884 107 ntBASIC-2.11□□□□□ -2.75
HIST1H3AP68431 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.11□□□□□ -2.75
HIST1H3AP68431 MIR1246-201ENST00000636535 73 ntBASIC-2.11□□□□□ -2.75
HIST1H3AP68431 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.12□□□□□ -2.75
HIST1H3AP68431 RNU4-24P-201ENST00000364565 139 ntBASIC-2.12□□□□□ -2.75
HIST1H3AP68431 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.12□□□□□ -2.75
HIST1H3AP68431 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.12□□□□□ -2.75
HIST1H3AP68431 AL353691.2-201ENST00000443795 59 ntBASIC-2.12□□□□□ -2.75
HIST1H3AP68431 RNU6-521P-201ENST00000516663 105 ntBASIC-2.12□□□□□ -2.75
HIST1H3AP68431 MIR4744-201ENST00000581563 82 ntBASIC-2.12□□□□□ -2.75
HIST1H3AP68431 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.12□□□□□ -2.75
HIST1H3AP68431 AL365265.1-201ENST00000621045 234 ntBASIC-2.12□□□□□ -2.75
HIST1H3AP68431 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.13□□□□□ -2.75
HIST1H3AP68431 RNU6-1104P-201ENST00000384723 104 ntBASIC-2.13□□□□□ -2.75
HIST1H3AP68431 MIR1255B2-201ENST00000408618 67 ntBASIC-2.13□□□□□ -2.75
HIST1H3AP68431 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.13□□□□□ -2.75
HIST1H3AP68431 SNORD2.1-201ENST00000458762 69 ntBASIC-2.13□□□□□ -2.75
HIST1H3AP68431 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.13□□□□□ -2.75
HIST1H3AP68431 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.14□□□□□ -2.75
HIST1H3AP68431 RPL35AP4-201ENST00000412007 102 ntBASIC-2.14□□□□□ -2.75
HIST1H3AP68431 RNU7-152P-201ENST00000458982 64 ntBASIC-2.14□□□□□ -2.75
HIST1H3AP68431 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.14□□□□□ -2.75
HIST1H3AP68431 RNU6-720P-201ENST00000516363 108 ntBASIC-2.14□□□□□ -2.75
HIST1H3AP68431 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.14□□□□□ -2.75
HIST1H3AP68431 AL627230.5-201ENST00000619807 58 ntBASIC-2.14□□□□□ -2.75
HIST1H3AP68431 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.14□□□□□ -2.75
HIST1H3AP68431 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.15□□□□□ -2.75
HIST1H3AP68431 RNA5SP86-201ENST00000390869 98 ntBASIC-2.15□□□□□ -2.75
HIST1H3AP68431 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.15□□□□□ -2.75
HIST1H3AP68431 RNU6-643P-201ENST00000384018 107 ntBASIC-2.16□□□□□ -2.76
HIST1H3AP68431 RNU6-651P-201ENST00000411040 105 ntBASIC-2.16□□□□□ -2.76
HIST1H3AP68431 MTATP6P21-201ENST00000440681 189 ntBASIC-2.16□□□□□ -2.76
HIST1H3AP68431 AP002795.1-201ENST00000534879 84 ntBASIC-2.16□□□□□ -2.76
HIST1H3AP68431 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.17□□□□□ -2.76
HIST1H3AP68431 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.17□□□□□ -2.76
HIST1H3AP68431 RNU6-495P-201ENST00000362995 107 ntBASIC-2.17□□□□□ -2.76
HIST1H3AP68431 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.17□□□□□ -2.76
HIST1H3AP68431 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.17□□□□□ -2.76
HIST1H3AP68431 RNU6-80P-201ENST00000384195 107 ntBASIC-2.17□□□□□ -2.76
HIST1H3AP68431 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.17□□□□□ -2.76
HIST1H3AP68431 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.17□□□□□ -2.76
HIST1H3AP68431 AC107027.2-201ENST00000512197 115 ntBASIC-2.17□□□□□ -2.76
HIST1H3AP68431 RNU6-450P-201ENST00000364654 107 ntBASIC-2.18□□□□□ -2.76
HIST1H3AP68431 RNU6-578P-201ENST00000390980 103 ntBASIC-2.18□□□□□ -2.76
HIST1H3AP68431 SNORD75.2-201ENST00000408784 58 ntBASIC-2.18□□□□□ -2.76
HIST1H3AP68431 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.18□□□□□ -2.76
HIST1H3AP68431 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 MTND3P22-201ENST00000510932 243 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 RNY3P15-201ENST00000516297 97 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.19□□□□□ -2.76
HIST1H3AP68431 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 RNU6-770P-201ENST00000363929 105 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 RNU6-704P-201ENST00000364162 103 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 SNORA33.1-201ENST00000364957 130 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 MIR548G-201ENST00000408442 89 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 MIR1252-201ENST00000408861 65 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 RNA5SP180-201ENST00000516181 101 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 RNU6-277P-201ENST00000516272 106 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 RNU6-90P-201ENST00000606352 106 ntBASIC-2.2□□□□□ -2.76
HIST1H3AP68431 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 AC090616.4-201ENST00000448026 115 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 RNU6-75P-201ENST00000515944 104 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 RNU6-168P-201ENST00000516189 101 ntBASIC-2.21□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms