Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC024614.3-201ENST00000637860 256 ntBASIC-2.66□□□□□ -2.84
UBA52P62987 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.66□□□□□ -2.84
UBA52P62987 Y_RNA.339-201ENST00000365325 102 ntBASIC-2.67□□□□□ -2.84
UBA52P62987 SNORA40.4-201ENST00000390971 128 ntBASIC-2.67□□□□□ -2.84
UBA52P62987 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.67□□□□□ -2.84
UBA52P62987 Y_RNA.639-201ENST00000458981 102 ntBASIC-2.67□□□□□ -2.84
UBA52P62987 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.67□□□□□ -2.84
UBA52P62987 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.68□□□□□ -2.84
UBA52P62987 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.68□□□□□ -2.84
UBA52P62987 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.68□□□□□ -2.84
UBA52P62987 RNU6-841P-201ENST00000383872 107 ntBASIC-2.68□□□□□ -2.84
UBA52P62987 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.68□□□□□ -2.84
UBA52P62987 Y_RNA.569-201ENST00000384749 103 ntBASIC-2.68□□□□□ -2.84
UBA52P62987 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.68□□□□□ -2.84
UBA52P62987 SNORD11.1-201ENST00000459482 85 ntBASIC-2.68□□□□□ -2.84
UBA52P62987 RNU6-264P-201ENST00000517134 104 ntBASIC-2.68□□□□□ -2.84
UBA52P62987 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.68□□□□□ -2.84
UBA52P62987 AC092794.1-201ENST00000612734 582 ntBASIC-2.68□□□□□ -2.84
UBA52P62987 AP000720.1-201ENST00000625091 483 ntBASIC-2.68□□□□□ -2.84
UBA52P62987 SNORA63.2-201ENST00000362603 126 ntBASIC-2.69□□□□□ -2.84
UBA52P62987 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.69□□□□□ -2.84
UBA52P62987 RNU4-24P-201ENST00000364565 139 ntBASIC-2.69□□□□□ -2.84
UBA52P62987 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.69□□□□□ -2.84
UBA52P62987 RNU5A-2P-201ENST00000384337 116 ntBASIC-2.69□□□□□ -2.84
UBA52P62987 MIR519A2-201ENST00000384990 87 ntBASIC-2.69□□□□□ -2.84
UBA52P62987 MIR548G-201ENST00000408442 89 ntBASIC-2.69□□□□□ -2.84
UBA52P62987 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.69□□□□□ -2.84
UBA52P62987 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.69□□□□□ -2.84
UBA52P62987 Y_RNA.88-201ENST00000363029 99 ntBASIC-2.7□□□□□ -2.84
UBA52P62987 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.7□□□□□ -2.84
UBA52P62987 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.7□□□□□ -2.84
UBA52P62987 RNU6-246P-201ENST00000384702 107 ntBASIC-2.7□□□□□ -2.84
UBA52P62987 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.7□□□□□ -2.84
UBA52P62987 Z83846.1-201ENST00000446798 265 ntBASIC-2.7□□□□□ -2.84
UBA52P62987 RNU7-88P-201ENST00000458752 63 ntBASIC-2.7□□□□□ -2.84
UBA52P62987 U7.5-201ENST00000517224 61 ntBASIC-2.7□□□□□ -2.84
UBA52P62987 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.71□□□□□ -2.84
UBA52P62987 MIR181A1-201ENST00000385026 110 ntBASIC-2.71□□□□□ -2.84
UBA52P62987 MIR3123-201ENST00000583417 75 ntBASIC-2.71□□□□□ -2.84
UBA52P62987 MIR3140-201ENST00000583685 90 ntBASIC-2.71□□□□□ -2.84
UBA52P62987 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.72□□□□□ -2.84
UBA52P62987 MIR548AM-201ENST00000584298 74 ntBASIC-2.72□□□□□ -2.84
UBA52P62987 RNU6-90P-201ENST00000606352 106 ntBASIC-2.72□□□□□ -2.84
UBA52P62987 AL132765.2-201ENST00000610812 351 ntBASIC-2.72□□□□□ -2.84
UBA52P62987 SNORD113-8-201ENST00000363497 74 ntBASIC-2.73□□□□□ -2.85
UBA52P62987 RNU6-373P-201ENST00000411247 98 ntBASIC-2.73□□□□□ -2.85
UBA52P62987 RNA5SP147-201ENST00000516493 109 ntBASIC-2.73□□□□□ -2.85
UBA52P62987 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.73□□□□□ -2.85
UBA52P62987 AL138825.1-201ENST00000618587 192 ntBASIC-2.73□□□□□ -2.85
UBA52P62987 AC124864.2-201ENST00000624736 186 ntBASIC-2.73□□□□□ -2.85
UBA52P62987 MIR4272-201ENST00000635924 64 ntBASIC-2.73□□□□□ -2.85
UBA52P62987 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.74□□□□□ -2.85
UBA52P62987 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.74□□□□□ -2.85
UBA52P62987 RNU6-211P-201ENST00000384047 107 ntBASIC-2.74□□□□□ -2.85
UBA52P62987 RNU6-260P-201ENST00000384092 107 ntBASIC-2.74□□□□□ -2.85
UBA52P62987 Y_RNA.541-201ENST00000384640 113 ntBASIC-2.74□□□□□ -2.85
UBA52P62987 RNU6-130P-201ENST00000411112 103 ntBASIC-2.74□□□□□ -2.85
UBA52P62987 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.74□□□□□ -2.85
UBA52P62987 MTND3P22-201ENST00000510932 243 ntBASIC-2.74□□□□□ -2.85
UBA52P62987 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.74□□□□□ -2.85
UBA52P62987 RNA5SP405-201ENST00000363059 114 ntBASIC-2.75□□□□□ -2.85
UBA52P62987 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.75□□□□□ -2.85
UBA52P62987 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.75□□□□□ -2.85
UBA52P62987 SNORA19.1-201ENST00000410656 129 ntBASIC-2.75□□□□□ -2.85
UBA52P62987 ELOCP20-201ENST00000422460 345 ntBASIC-2.75□□□□□ -2.85
UBA52P62987 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-2.75□□□□□ -2.85
UBA52P62987 U8.20-201ENST00000459445 131 ntBASIC-2.75□□□□□ -2.85
UBA52P62987 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.75□□□□□ -2.85
UBA52P62987 MIR548AG1-201ENST00000579932 66 ntBASIC-2.75□□□□□ -2.85
UBA52P62987 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.76□□□□□ -2.85
UBA52P62987 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.76□□□□□ -2.85
UBA52P62987 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.76□□□□□ -2.85
UBA52P62987 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2.77□□□□□ -2.85
UBA52P62987 SNORD38.1-201ENST00000363863 68 ntBASIC-2.77□□□□□ -2.85
UBA52P62987 RNU6-608P-201ENST00000383927 104 ntBASIC-2.77□□□□□ -2.85
UBA52P62987 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.77□□□□□ -2.85
UBA52P62987 RNU6-518P-201ENST00000516056 96 ntBASIC-2.77□□□□□ -2.85
UBA52P62987 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.77□□□□□ -2.85
UBA52P62987 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.77□□□□□ -2.85
UBA52P62987 AL050303.3-201ENST00000613704 284 ntBASIC-2.77□□□□□ -2.85
UBA52P62987 MTND5P26-201ENST00000426018 1752 ntBASIC-2.77□□□□□ -2.85
UBA52P62987 RNU4-90P-201ENST00000362773 141 ntBASIC-2.78□□□□□ -2.85
UBA52P62987 Y_RNA.394-201ENST00000383942 103 ntBASIC-2.78□□□□□ -2.85
UBA52P62987 RNU6-890P-201ENST00000384121 107 ntBASIC-2.78□□□□□ -2.85
UBA52P62987 AL365265.1-201ENST00000621045 234 ntBASIC-2.78□□□□□ -2.85
UBA52P62987 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.79□□□□□ -2.86
UBA52P62987 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.79□□□□□ -2.86
UBA52P62987 RNU6-310P-201ENST00000384655 107 ntBASIC-2.79□□□□□ -2.86
UBA52P62987 AC099799.1-201ENST00000439809 192 ntBASIC-2.79□□□□□ -2.86
UBA52P62987 RNU6-132P-201ENST00000383863 107 ntBASIC-2.8□□□□□ -2.86
UBA52P62987 RNU6-381P-201ENST00000391259 108 ntBASIC-2.8□□□□□ -2.86
UBA52P62987 MIR548Q-201ENST00000408404 100 ntBASIC-2.8□□□□□ -2.86
UBA52P62987 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.8□□□□□ -2.86
UBA52P62987 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.8□□□□□ -2.86
UBA52P62987 MTND4LP30-201ENST00000454092 297 ntBASIC-2.8□□□□□ -2.86
UBA52P62987 RNU6-382P-201ENST00000365181 106 ntBASIC-2.81□□□□□ -2.86
UBA52P62987 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.81□□□□□ -2.86
UBA52P62987 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.81□□□□□ -2.86
UBA52P62987 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.81□□□□□ -2.86
UBA52P62987 RNU4-88P-201ENST00000411220 86 ntBASIC-2.81□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms