Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNU6-41P-201ENST00000384741 107 ntBASIC0.65□□□□□ -2.31
CLCN3P51790 MIR635-201ENST00000384830 98 ntBASIC0.65□□□□□ -2.31
CLCN3P51790 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
CLCN3P51790 MTATP8P2-201ENST00000435212 202 ntBASIC0.65□□□□□ -2.31
CLCN3P51790 Y_RNA.659-201ENST00000515994 113 ntBASIC0.65□□□□□ -2.31
CLCN3P51790 AC138869.1-201ENST00000568623 124 ntBASIC0.65□□□□□ -2.31
CLCN3P51790 Y_RNA.107-201ENST00000363190 121 ntBASIC0.64□□□□□ -2.31
CLCN3P51790 RNU6-640P-201ENST00000363693 105 ntBASIC0.64□□□□□ -2.31
CLCN3P51790 SNORD18A-201ENST00000363753 72 ntBASIC0.64□□□□□ -2.31
CLCN3P51790 RNU6-905P-201ENST00000384434 107 ntBASIC0.64□□□□□ -2.31
CLCN3P51790 Y_RNA.495-201ENST00000384435 112 ntBASIC0.64□□□□□ -2.31
CLCN3P51790 RNU6-813P-201ENST00000384691 107 ntBASIC0.64□□□□□ -2.31
CLCN3P51790 MIR516A2-201ENST00000384888 90 ntBASIC0.64□□□□□ -2.31
CLCN3P51790 MIR516A1-201ENST00000385033 90 ntBASIC0.64□□□□□ -2.31
CLCN3P51790 RNU6-135P-201ENST00000516769 101 ntBASIC0.64□□□□□ -2.31
CLCN3P51790 RNU6-86P-201ENST00000606534 107 ntBASIC0.64□□□□□ -2.31
CLCN3P51790 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
CLCN3P51790 Y_RNA.36-201ENST00000362602 112 ntBASIC0.63□□□□□ -2.31
CLCN3P51790 MIR181B2-201ENST00000385004 89 ntBASIC0.63□□□□□ -2.31
CLCN3P51790 MIR644A-201ENST00000385262 94 ntBASIC0.63□□□□□ -2.31
CLCN3P51790 MIR936-201ENST00000401264 98 ntBASIC0.63□□□□□ -2.31
CLCN3P51790 RNA5SP222-201ENST00000411039 105 ntBASIC0.63□□□□□ -2.31
CLCN3P51790 RNU7-195P-201ENST00000458793 62 ntBASIC0.63□□□□□ -2.31
CLCN3P51790 RNU6-1265P-201ENST00000516342 103 ntBASIC0.63□□□□□ -2.31
CLCN3P51790 MIR3678-201ENST00000578455 94 ntBASIC0.63□□□□□ -2.31
CLCN3P51790 Y_RNA.57-201ENST00000362806 113 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 RNA5SP403-201ENST00000363598 108 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 RNU6-1125P-201ENST00000363601 107 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 RNA5SP117-201ENST00000365294 118 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 RNU6-480P-201ENST00000384332 107 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 MIR216A-201ENST00000385063 110 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 RNU6-644P-201ENST00000391155 98 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 RNU6-1254P-201ENST00000391266 104 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 RNA5SP47-201ENST00000517230 109 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 MIR4639-201ENST00000584938 69 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 AC025521.1-201ENST00000621624 286 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 MIR6828-201ENST00000636181 60 ntBASIC0.62□□□□□ -2.31
CLCN3P51790 SNORD28-201ENST00000384706 75 ntBASIC0.61□□□□□ -2.31
CLCN3P51790 RNA5SP89-201ENST00000410300 108 ntBASIC0.61□□□□□ -2.31
CLCN3P51790 Y_RNA.809-201ENST00000516058 95 ntBASIC0.61□□□□□ -2.31
CLCN3P51790 RNU6-168P-201ENST00000516189 101 ntBASIC0.61□□□□□ -2.31
CLCN3P51790 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
CLCN3P51790 Y_RNA.705-201ENST00000516862 110 ntBASIC0.61□□□□□ -2.31
CLCN3P51790 AL513043.2-201ENST00000573941 143 ntBASIC0.61□□□□□ -2.31
CLCN3P51790 AC103810.7-201ENST00000607821 91 ntBASIC0.61□□□□□ -2.31
CLCN3P51790 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.61□□□□□ -2.31
CLCN3P51790 SNORD114-26-201ENST00000363543 72 ntBASIC0.6□□□□□ -2.31
CLCN3P51790 MIR599-201ENST00000385069 95 ntBASIC0.6□□□□□ -2.31
CLCN3P51790 MIR140-201ENST00000385282 100 ntBASIC0.6□□□□□ -2.31
CLCN3P51790 RNU6-972P-201ENST00000391208 107 ntBASIC0.6□□□□□ -2.31
CLCN3P51790 RNA5SP193-201ENST00000410353 107 ntBASIC0.6□□□□□ -2.31
CLCN3P51790 RNU6-887P-201ENST00000410660 100 ntBASIC0.6□□□□□ -2.31
CLCN3P51790 RNU7-61P-201ENST00000515897 61 ntBASIC0.6□□□□□ -2.31
CLCN3P51790 RNU7-161P-201ENST00000517289 62 ntBASIC0.6□□□□□ -2.31
CLCN3P51790 RN7SL793P-201ENST00000583259 296 ntBASIC0.6□□□□□ -2.31
CLCN3P51790 Y_RNA.96-201ENST00000363092 109 ntBASIC0.59□□□□□ -2.31
CLCN3P51790 SNORA36.1-201ENST00000363424 132 ntBASIC0.59□□□□□ -2.31
CLCN3P51790 SNORD58A-201ENST00000383875 65 ntBASIC0.59□□□□□ -2.31
CLCN3P51790 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
CLCN3P51790 Y_RNA.648-201ENST00000459455 110 ntBASIC0.59□□□□□ -2.31
CLCN3P51790 RNA5SP94-201ENST00000516917 108 ntBASIC0.59□□□□□ -2.31
CLCN3P51790 MIR4711-201ENST00000578274 70 ntBASIC0.59□□□□□ -2.31
CLCN3P51790 MTRNR2L2-201ENST00000604882 87 ntBASIC0.59□□□□□ -2.31
CLCN3P51790 AC243829.3-201ENST00000622177 108 ntBASIC0.59□□□□□ -2.31
CLCN3P51790 Y_RNA.290-201ENST00000364879 114 ntBASIC0.58□□□□□ -2.32
CLCN3P51790 SNORA36.2-201ENST00000384004 127 ntBASIC0.58□□□□□ -2.32
CLCN3P51790 RNY1P4-201ENST00000384595 115 ntBASIC0.58□□□□□ -2.32
CLCN3P51790 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.58□□□□□ -2.32
CLCN3P51790 SNORA40.13-201ENST00000516379 120 ntBASIC0.58□□□□□ -2.32
CLCN3P51790 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
CLCN3P51790 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.58□□□□□ -2.32
CLCN3P51790 MIR2052-201ENST00000636055 55 ntBASIC0.58□□□□□ -2.32
CLCN3P51790 MIR488-201ENST00000365739 83 ntBASIC0.57□□□□□ -2.32
CLCN3P51790 RNU6-75P-201ENST00000515944 104 ntBASIC0.57□□□□□ -2.32
CLCN3P51790 RN7SKP12-201ENST00000516275 143 ntBASIC0.57□□□□□ -2.32
CLCN3P51790 SCARNA16.5-201ENST00000517114 183 ntBASIC0.57□□□□□ -2.32
CLCN3P51790 U7.3-201ENST00000616123 62 ntBASIC0.57□□□□□ -2.32
CLCN3P51790 AC244669.1-204ENST00000621564 178 ntBASIC0.57□□□□□ -2.32
CLCN3P51790 SNORD115-24-201ENST00000363528 82 ntBASIC0.56□□□□□ -2.32
CLCN3P51790 RNU6-524P-201ENST00000384270 107 ntBASIC0.56□□□□□ -2.32
CLCN3P51790 MIR7-2-201ENST00000384970 110 ntBASIC0.56□□□□□ -2.32
CLCN3P51790 RNU6-243P-201ENST00000391140 107 ntBASIC0.56□□□□□ -2.32
CLCN3P51790 RNU7-85P-201ENST00000458851 63 ntBASIC0.56□□□□□ -2.32
CLCN3P51790 Y_RNA.677-201ENST00000516401 85 ntBASIC0.56□□□□□ -2.32
CLCN3P51790 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
CLCN3P51790 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CLCN3P51790 SNORD116-10-201ENST00000363791 102 ntBASIC0.55□□□□□ -2.32
CLCN3P51790 SNORD41.1-201ENST00000391000 69 ntBASIC0.55□□□□□ -2.32
CLCN3P51790 snoU13.11-201ENST00000459219 104 ntBASIC0.55□□□□□ -2.32
CLCN3P51790 RNU6-469P-201ENST00000516253 101 ntBASIC0.55□□□□□ -2.32
CLCN3P51790 MALAT1.1-201ENST00000618249 95 ntBASIC0.55□□□□□ -2.32
CLCN3P51790 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
CLCN3P51790 RNU6-957P-201ENST00000363652 99 ntBASIC0.54□□□□□ -2.32
CLCN3P51790 RNU6-726P-201ENST00000364680 107 ntBASIC0.54□□□□□ -2.32
CLCN3P51790 RNA5SP517-201ENST00000364724 117 ntBASIC0.54□□□□□ -2.32
CLCN3P51790 Y_RNA.283-201ENST00000364798 112 ntBASIC0.54□□□□□ -2.32
CLCN3P51790 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
CLCN3P51790 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms