Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNA5SP272-201ENST00000516095 111 ntBASIC-0.38□□□□□ -2.47
CX3CR1P49238 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.39□□□□□ -2.47
CX3CR1P49238 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.39□□□□□ -2.47
CX3CR1P49238 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.39□□□□□ -2.47
CX3CR1P49238 MT-TY-201ENST00000387409 66 ntBASIC-0.39□□□□□ -2.47
CX3CR1P49238 RNA5SP300-201ENST00000391197 107 ntBASIC-0.39□□□□□ -2.47
CX3CR1P49238 SPINT5P-201ENST00000448174 155 ntBASIC-0.39□□□□□ -2.47
CX3CR1P49238 MIR4460-201ENST00000577862 86 ntBASIC-0.39□□□□□ -2.47
CX3CR1P49238 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.39□□□□□ -2.47
CX3CR1P49238 uc_338.10-201ENST00000621872 182 ntBASIC-0.39□□□□□ -2.47
CX3CR1P49238 AP001340.1-201ENST00000624405 217 ntBASIC-0.39□□□□□ -2.47
CX3CR1P49238 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.4□□□□□ -2.47
CX3CR1P49238 RNU6-363P-201ENST00000362895 105 ntBASIC-0.4□□□□□ -2.47
CX3CR1P49238 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.4□□□□□ -2.47
CX3CR1P49238 MIR548G-201ENST00000408442 89 ntBASIC-0.4□□□□□ -2.47
CX3CR1P49238 AL158147.1-201ENST00000443970 75 ntBASIC-0.4□□□□□ -2.47
CX3CR1P49238 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.4□□□□□ -2.47
CX3CR1P49238 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.4□□□□□ -2.47
CX3CR1P49238 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.4□□□□□ -2.47
CX3CR1P49238 MIR3666-201ENST00000607845 111 ntBASIC-0.4□□□□□ -2.47
CX3CR1P49238 AL590491.3-201ENST00000610731 82 ntBASIC-0.4□□□□□ -2.47
CX3CR1P49238 AL512310.12-203ENST00000640543 90 ntBASIC-0.4□□□□□ -2.47
CX3CR1P49238 RNU6-647P-201ENST00000364243 107 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 RNU6-154P-201ENST00000384306 106 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 SNORD38.2-201ENST00000384470 69 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 MIR569-201ENST00000385228 96 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 MIR759-201ENST00000390224 91 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 RNU6-243P-201ENST00000391140 107 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 RNA5SP136-201ENST00000410906 107 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 MTND5P41-201ENST00000517498 206 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 AP001328.1-201ENST00000528550 176 ntBASIC-0.41□□□□□ -2.48
CX3CR1P49238 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.42□□□□□ -2.48
CX3CR1P49238 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.42□□□□□ -2.48
CX3CR1P49238 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.42□□□□□ -2.48
CX3CR1P49238 MIR513C-201ENST00000401352 84 ntBASIC-0.42□□□□□ -2.48
CX3CR1P49238 snoU13.11-201ENST00000459219 104 ntBASIC-0.42□□□□□ -2.48
CX3CR1P49238 MIR3144-201ENST00000579460 79 ntBASIC-0.42□□□□□ -2.48
CX3CR1P49238 AL353621.2-201ENST00000605340 133 ntBASIC-0.42□□□□□ -2.48
CX3CR1P49238 SNORD38.1-201ENST00000363863 68 ntBASIC-0.43□□□□□ -2.48
CX3CR1P49238 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.43□□□□□ -2.48
CX3CR1P49238 MIR214-201ENST00000385214 110 ntBASIC-0.43□□□□□ -2.48
CX3CR1P49238 MT-TG-201ENST00000387429 68 ntBASIC-0.43□□□□□ -2.48
CX3CR1P49238 MIR548X2-201ENST00000579776 100 ntBASIC-0.43□□□□□ -2.48
CX3CR1P49238 RNU6-90P-201ENST00000606352 106 ntBASIC-0.43□□□□□ -2.48
CX3CR1P49238 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.43□□□□□ -2.48
CX3CR1P49238 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.43□□□□□ -2.48
CX3CR1P49238 RNU6-235P-201ENST00000362644 107 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 SNORD114-11-201ENST00000363738 75 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 MIR652-201ENST00000385278 98 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.44□□□□□ -2.48
CX3CR1P49238 AC007012.1-201ENST00000567192 175 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 MIR4696-201ENST00000581431 70 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 MIR4719-201ENST00000585233 84 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 AL162726.3-218ENST00000636401 95 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 MIR4788-201ENST00000639104 80 ntBASIC-0.44□□□□□ -2.48
CX3CR1P49238 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.45□□□□□ -2.48
CX3CR1P49238 SNORD114-29-201ENST00000364819 70 ntBASIC-0.45□□□□□ -2.48
CX3CR1P49238 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.45□□□□□ -2.48
CX3CR1P49238 RNU6-320P-201ENST00000516511 106 ntBASIC-0.45□□□□□ -2.48
CX3CR1P49238 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.45□□□□□ -2.48
CX3CR1P49238 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.45□□□□□ -2.48
CX3CR1P49238 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.45□□□□□ -2.48
CX3CR1P49238 RNA5SP480-201ENST00000516840 109 ntBASIC-0.45□□□□□ -2.48
CX3CR1P49238 RNA5SP98-201ENST00000363158 137 ntBASIC-0.46□□□□□ -2.48
CX3CR1P49238 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.46□□□□□ -2.48
CX3CR1P49238 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.46□□□□□ -2.48
CX3CR1P49238 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.46□□□□□ -2.48
CX3CR1P49238 RNU6-409P-201ENST00000384114 104 ntBASIC-0.46□□□□□ -2.48
CX3CR1P49238 SNORA49-201ENST00000386157 136 ntBASIC-0.46□□□□□ -2.48
CX3CR1P49238 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.46□□□□□ -2.48
CX3CR1P49238 AC145423.2-201ENST00000610631 239 ntBASIC-0.46□□□□□ -2.48
CX3CR1P49238 AL442128.1-201ENST00000615151 90 ntBASIC-0.46□□□□□ -2.48
CX3CR1P49238 AL109933.3-201ENST00000619095 188 ntBASIC-0.46□□□□□ -2.48
CX3CR1P49238 RNU6-664P-201ENST00000362381 107 ntBASIC-0.47□□□□□ -2.48
CX3CR1P49238 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.47□□□□□ -2.48
CX3CR1P49238 SNORD58C-201ENST00000365223 64 ntBASIC-0.47□□□□□ -2.48
CX3CR1P49238 RNU6-816P-201ENST00000390914 107 ntBASIC-0.47□□□□□ -2.48
CX3CR1P49238 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.47□□□□□ -2.48
CX3CR1P49238 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.47□□□□□ -2.48
CX3CR1P49238 RNU6-75P-201ENST00000515944 104 ntBASIC-0.47□□□□□ -2.48
CX3CR1P49238 RNU6-426P-201ENST00000516464 97 ntBASIC-0.47□□□□□ -2.48
CX3CR1P49238 U7.2-201ENST00000607576 63 ntBASIC-0.47□□□□□ -2.48
CX3CR1P49238 MIR548O2-201ENST00000616090 70 ntBASIC-0.47□□□□□ -2.48
CX3CR1P49238 MTND5P18-201ENST00000445624 1801 ntBASIC-0.48□□□□□ -2.49
CX3CR1P49238 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.48□□□□□ -2.49
CX3CR1P49238 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.48□□□□□ -2.49
CX3CR1P49238 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.48□□□□□ -2.49
CX3CR1P49238 SNORD101-201ENST00000384027 73 ntBASIC-0.48□□□□□ -2.49
CX3CR1P49238 MIR9-2-201ENST00000384838 87 ntBASIC-0.48□□□□□ -2.49
CX3CR1P49238 AC025166.1-201ENST00000612411 163 ntBASIC-0.48□□□□□ -2.49
CX3CR1P49238 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.48□□□□□ -2.49
CX3CR1P49238 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.49□□□□□ -2.49
CX3CR1P49238 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms