Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SNORD77.2-201ENST00000391045 68 ntBASIC1.91□□□□□ -2.1
RXRBP28702 RNU6-466P-201ENST00000391224 103 ntBASIC1.91□□□□□ -2.1
RXRBP28702 AC074348.1-201ENST00000426503 132 ntBASIC1.91□□□□□ -2.1
RXRBP28702 RNU6-411P-201ENST00000384451 107 ntBASIC1.9□□□□□ -2.11
RXRBP28702 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RXRBP28702 RNU7-195P-201ENST00000458793 62 ntBASIC1.9□□□□□ -2.11
RXRBP28702 snoU13.17-201ENST00000458802 104 ntBASIC1.9□□□□□ -2.11
RXRBP28702 snoU13.9-201ENST00000458927 103 ntBASIC1.9□□□□□ -2.11
RXRBP28702 RNA5SP476-201ENST00000516613 103 ntBASIC1.9□□□□□ -2.11
RXRBP28702 AC019176.1-201ENST00000518519 225 ntBASIC1.9□□□□□ -2.11
RXRBP28702 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
RXRBP28702 MIR4484-201ENST00000582855 83 ntBASIC1.9□□□□□ -2.11
RXRBP28702 AC013244.2-201ENST00000603396 103 ntBASIC1.9□□□□□ -2.11
RXRBP28702 RNU6-403P-201ENST00000363163 104 ntBASIC1.89□□□□□ -2.11
RXRBP28702 SNORD48-201ENST00000364953 64 ntBASIC1.89□□□□□ -2.11
RXRBP28702 Y_RNA.536-201ENST00000384621 113 ntBASIC1.89□□□□□ -2.11
RXRBP28702 MIR222-201ENST00000384992 110 ntBASIC1.89□□□□□ -2.11
RXRBP28702 MIR548U-201ENST00000390728 81 ntBASIC1.89□□□□□ -2.11
RXRBP28702 AC008834.1-201ENST00000511612 175 ntBASIC1.89□□□□□ -2.11
RXRBP28702 RNU6-687P-201ENST00000516443 89 ntBASIC1.89□□□□□ -2.11
RXRBP28702 RNU6-448P-201ENST00000517052 107 ntBASIC1.89□□□□□ -2.11
RXRBP28702 MIR664A-201ENST00000626086 82 ntBASIC1.89□□□□□ -2.11
RXRBP28702 SNORD1A-201ENST00000364968 72 ntBASIC1.88□□□□□ -2.11
RXRBP28702 RNU6-590P-201ENST00000365039 107 ntBASIC1.88□□□□□ -2.11
RXRBP28702 RNU7-185P-201ENST00000459215 60 ntBASIC1.88□□□□□ -2.11
RXRBP28702 RNU6-539P-201ENST00000516665 103 ntBASIC1.88□□□□□ -2.11
RXRBP28702 RNU6-208P-201ENST00000362431 107 ntBASIC1.87□□□□□ -2.11
RXRBP28702 RNU1-78P-201ENST00000391248 165 ntBASIC1.87□□□□□ -2.11
RXRBP28702 MIR5000-201ENST00000577717 103 ntBASIC1.87□□□□□ -2.11
RXRBP28702 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.87□□□□□ -2.11
RXRBP28702 Y_RNA.13-201ENST00000362403 112 ntBASIC1.86□□□□□ -2.11
RXRBP28702 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
RXRBP28702 MIR1304-201ENST00000408243 91 ntBASIC1.86□□□□□ -2.11
RXRBP28702 RNU6-380P-201ENST00000410207 107 ntBASIC1.86□□□□□ -2.11
RXRBP28702 AC015818.7-201ENST00000428754 109 ntBASIC1.86□□□□□ -2.11
RXRBP28702 RNU6-303P-201ENST00000517091 106 ntBASIC1.86□□□□□ -2.11
RXRBP28702 MIR6082-201ENST00000613604 109 ntBASIC1.86□□□□□ -2.11
RXRBP28702 MIR8063-201ENST00000621930 81 ntBASIC1.86□□□□□ -2.11
RXRBP28702 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.86□□□□□ -2.11
RXRBP28702 AC023934.1-201ENST00000574529 2389 ntBASIC1.85□□□□□ -2.11
RXRBP28702 RNU6-1260P-201ENST00000362944 107 ntBASIC1.85□□□□□ -2.11
RXRBP28702 Y_RNA.264-201ENST00000364665 102 ntBASIC1.85□□□□□ -2.11
RXRBP28702 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RXRBP28702 AC092628.1-201ENST00000436250 252 ntBASIC1.85□□□□□ -2.11
RXRBP28702 MIR3664-201ENST00000579074 99 ntBASIC1.85□□□□□ -2.11
RXRBP28702 TRDV1-202ENST00000621643 102 ntBASIC1.85□□□□□ -2.11
RXRBP28702 U6.100-201ENST00000636230 99 ntBASIC1.85□□□□□ -2.11
RXRBP28702 MIR1297-201ENST00000637311 77 ntBASIC1.85□□□□□ -2.11
RXRBP28702 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RXRBP28702 Y_RNA.56-201ENST00000362798 112 ntBASIC1.84□□□□□ -2.11
RXRBP28702 RNU6-1051P-201ENST00000365471 102 ntBASIC1.84□□□□□ -2.11
RXRBP28702 SNORD83.1-201ENST00000411362 77 ntBASIC1.84□□□□□ -2.11
RXRBP28702 RNU6-634P-201ENST00000459134 106 ntBASIC1.84□□□□□ -2.11
RXRBP28702 RNU6-70P-201ENST00000516438 60 ntBASIC1.84□□□□□ -2.11
RXRBP28702 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.84□□□□□ -2.11
RXRBP28702 MIR4422-201ENST00000581938 83 ntBASIC1.84□□□□□ -2.11
RXRBP28702 MTRNR2L2-201ENST00000604882 87 ntBASIC1.84□□□□□ -2.11
RXRBP28702 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.84□□□□□ -2.11
RXRBP28702 Y_RNA.42-201ENST00000362660 108 ntBASIC1.83□□□□□ -2.12
RXRBP28702 MIR193B-201ENST00000384907 83 ntBASIC1.83□□□□□ -2.12
RXRBP28702 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.83□□□□□ -2.12
RXRBP28702 Y_RNA.809-201ENST00000516058 95 ntBASIC1.83□□□□□ -2.12
RXRBP28702 AC036111.3-201ENST00000526389 112 ntBASIC1.83□□□□□ -2.12
RXRBP28702 MIR1273G-201ENST00000577677 100 ntBASIC1.83□□□□□ -2.12
RXRBP28702 MIR548H5-201ENST00000580314 60 ntBASIC1.83□□□□□ -2.12
RXRBP28702 MIR4696-201ENST00000581431 70 ntBASIC1.83□□□□□ -2.12
RXRBP28702 Y_RNA.12-201ENST00000362393 112 ntBASIC1.82□□□□□ -2.12
RXRBP28702 Y_RNA.386-201ENST00000383913 105 ntBASIC1.82□□□□□ -2.12
RXRBP28702 RNU6-1065P-201ENST00000384513 106 ntBASIC1.82□□□□□ -2.12
RXRBP28702 AC079140.2-201ENST00000506193 142 ntBASIC1.82□□□□□ -2.12
RXRBP28702 RNU6-807P-201ENST00000516805 107 ntBASIC1.82□□□□□ -2.12
RXRBP28702 YWHAEP2-201ENST00000580066 112 ntBASIC1.82□□□□□ -2.12
RXRBP28702 YWHAEP3-201ENST00000582767 121 ntBASIC1.82□□□□□ -2.12
RXRBP28702 MIR101-2-201ENST00000362195 79 ntBASIC1.81□□□□□ -2.12
RXRBP28702 RNU5F-1-201ENST00000362507 117 ntBASIC1.81□□□□□ -2.12
RXRBP28702 RNU6-330P-201ENST00000363015 107 ntBASIC1.81□□□□□ -2.12
RXRBP28702 Y_RNA.115-201ENST00000363272 98 ntBASIC1.81□□□□□ -2.12
RXRBP28702 MIR1257-201ENST00000408490 117 ntBASIC1.81□□□□□ -2.12
RXRBP28702 RNU6-1054P-201ENST00000411293 104 ntBASIC1.81□□□□□ -2.12
RXRBP28702 MIR2113-201ENST00000459007 91 ntBASIC1.81□□□□□ -2.12
RXRBP28702 HAR1A.1-201ENST00000459583 118 ntBASIC1.81□□□□□ -2.12
RXRBP28702 Y_RNA.697-201ENST00000516776 113 ntBASIC1.81□□□□□ -2.12
RXRBP28702 RNU6-765P-201ENST00000516916 99 ntBASIC1.81□□□□□ -2.12
RXRBP28702 MIR3140-201ENST00000583685 90 ntBASIC1.81□□□□□ -2.12
RXRBP28702 MIR3660-201ENST00000584845 100 ntBASIC1.81□□□□□ -2.12
RXRBP28702 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RXRBP28702 RNU6-664P-201ENST00000362381 107 ntBASIC1.8□□□□□ -2.12
RXRBP28702 Y_RNA.207-201ENST00000364142 106 ntBASIC1.8□□□□□ -2.12
RXRBP28702 Y_RNA.363-201ENST00000365529 113 ntBASIC1.8□□□□□ -2.12
RXRBP28702 SNORA75.2-201ENST00000391138 150 ntBASIC1.8□□□□□ -2.12
RXRBP28702 SNORA75.3-201ENST00000391231 150 ntBASIC1.8□□□□□ -2.12
RXRBP28702 AC048334.1-201ENST00000477975 159 ntBASIC1.8□□□□□ -2.12
RXRBP28702 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.8□□□□□ -2.12
RXRBP28702 AL512310.8-201ENST00000550183 120 ntBASIC1.8□□□□□ -2.12
RXRBP28702 RNU7-10P-201ENST00000607194 63 ntBASIC1.8□□□□□ -2.12
RXRBP28702 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
RXRBP28702 MIR125B2-201ENST00000385128 89 ntBASIC1.79□□□□□ -2.12
RXRBP28702 SNORA40.6-201ENST00000391153 128 ntBASIC1.79□□□□□ -2.12
RXRBP28702 RNU6-587P-201ENST00000391282 106 ntBASIC1.79□□□□□ -2.12
RXRBP28702 MIR1265-201ENST00000408444 86 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms