Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 YWHAEP2-201ENST00000580066 112 ntBASIC1.87□□□□□ -2.11
HOXD8P13378 YWHAEP3-201ENST00000582767 121 ntBASIC1.87□□□□□ -2.11
HOXD8P13378 TRDV1-202ENST00000621643 102 ntBASIC1.87□□□□□ -2.11
HOXD8P13378 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
HOXD8P13378 RNY4P3-201ENST00000365254 95 ntBASIC1.86□□□□□ -2.11
HOXD8P13378 MIR125B2-201ENST00000385128 89 ntBASIC1.86□□□□□ -2.11
HOXD8P13378 AC036111.3-201ENST00000526389 112 ntBASIC1.86□□□□□ -2.11
HOXD8P13378 Y_RNA.239-201ENST00000364444 113 ntBASIC1.85□□□□□ -2.11
HOXD8P13378 RNU6-392P-201ENST00000364926 101 ntBASIC1.85□□□□□ -2.11
HOXD8P13378 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HOXD8P13378 MIR1265-201ENST00000408444 86 ntBASIC1.85□□□□□ -2.11
HOXD8P13378 AL591704.2-201ENST00000421658 181 ntBASIC1.85□□□□□ -2.11
HOXD8P13378 RNU6-765P-201ENST00000516916 99 ntBASIC1.85□□□□□ -2.11
HOXD8P13378 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXD8P13378 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HOXD8P13378 SNORD111-201ENST00000408139 94 ntBASIC1.84□□□□□ -2.11
HOXD8P13378 RNU6-1054P-201ENST00000411293 104 ntBASIC1.84□□□□□ -2.11
HOXD8P13378 RNU7-40P-201ENST00000516397 64 ntBASIC1.84□□□□□ -2.11
HOXD8P13378 MIR4422-201ENST00000581938 83 ntBASIC1.84□□□□□ -2.11
HOXD8P13378 MIR4484-201ENST00000582855 83 ntBASIC1.84□□□□□ -2.11
HOXD8P13378 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXD8P13378 RMST_2.1-201ENST00000617263 136 ntBASIC1.84□□□□□ -2.11
HOXD8P13378 RNA5SP325-201ENST00000363756 130 ntBASIC1.83□□□□□ -2.12
HOXD8P13378 RNU6-681P-201ENST00000364012 104 ntBASIC1.83□□□□□ -2.12
HOXD8P13378 Y_RNA.205-201ENST00000364128 113 ntBASIC1.83□□□□□ -2.12
HOXD8P13378 RNU6-471P-201ENST00000383944 106 ntBASIC1.83□□□□□ -2.12
HOXD8P13378 MIR519A1-201ENST00000385257 85 ntBASIC1.83□□□□□ -2.12
HOXD8P13378 MIR934-201ENST00000401241 83 ntBASIC1.83□□□□□ -2.12
HOXD8P13378 Y_RNA.596-201ENST00000410462 109 ntBASIC1.83□□□□□ -2.12
HOXD8P13378 RPS27P16-201ENST00000425758 201 ntBASIC1.83□□□□□ -2.12
HOXD8P13378 AC138907.6-201ENST00000568401 126 ntBASIC1.83□□□□□ -2.12
HOXD8P13378 AC138869.1-201ENST00000568623 124 ntBASIC1.83□□□□□ -2.12
HOXD8P13378 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.83□□□□□ -2.12
HOXD8P13378 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HOXD8P13378 RNU6-1260P-201ENST00000362944 107 ntBASIC1.82□□□□□ -2.12
HOXD8P13378 Y_RNA.327-201ENST00000365201 102 ntBASIC1.82□□□□□ -2.12
HOXD8P13378 Y_RNA.532-201ENST00000384590 113 ntBASIC1.82□□□□□ -2.12
HOXD8P13378 MIR599-201ENST00000385069 95 ntBASIC1.82□□□□□ -2.12
HOXD8P13378 RPS26P5-201ENST00000418544 335 ntBASIC1.82□□□□□ -2.12
HOXD8P13378 AC097635.1-201ENST00000450678 155 ntBASIC1.82□□□□□ -2.12
HOXD8P13378 U6.111-201ENST00000636093 83 ntBASIC1.82□□□□□ -2.12
HOXD8P13378 Y_RNA.12-201ENST00000362393 112 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 Y_RNA.36-201ENST00000362602 112 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 SNORD101-201ENST00000384027 73 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 RNU6-800P-201ENST00000384473 103 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 RNU6-535P-201ENST00000384722 107 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 MIR154-201ENST00000385243 84 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 SNORD30.1-201ENST00000391309 70 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 MIR942-201ENST00000401111 86 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 AL606490.4-201ENST00000423117 127 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 AC093423.1-201ENST00000440817 142 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 MIR4676-201ENST00000583078 72 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 AC106800.4-201ENST00000614905 153 ntBASIC1.81□□□□□ -2.12
HOXD8P13378 Y_RNA.42-201ENST00000362660 108 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 Y_RNA.386-201ENST00000383913 105 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 RNU6-42P-201ENST00000384165 107 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 SNORA8.1-201ENST00000384250 140 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 RNU6-910P-201ENST00000390844 107 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 RNU1-78P-201ENST00000391248 165 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 MIR938-201ENST00000401216 83 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 RNU6-977P-201ENST00000516411 103 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 MIR4452-201ENST00000583004 71 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 AL645939.4-201ENST00000604495 135 ntBASIC1.8□□□□□ -2.12
HOXD8P13378 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HOXD8P13378 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HOXD8P13378 SNORD114-26-201ENST00000363543 72 ntBASIC1.79□□□□□ -2.12
HOXD8P13378 SNORA80D-201ENST00000384488 135 ntBASIC1.79□□□□□ -2.12
HOXD8P13378 MIR100-201ENST00000385259 80 ntBASIC1.79□□□□□ -2.12
HOXD8P13378 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXD8P13378 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
HOXD8P13378 AC027335.2-201ENST00000624030 375 ntBASIC1.79□□□□□ -2.12
HOXD8P13378 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HOXD8P13378 AC067940.1-201ENST00000458411 300 ntBASIC1.78□□□□□ -2.12
HOXD8P13378 MIR6779-201ENST00000617283 64 ntBASIC1.78□□□□□ -2.12
HOXD8P13378 U6.100-201ENST00000636230 99 ntBASIC1.78□□□□□ -2.12
HOXD8P13378 RNU6-1051P-201ENST00000365471 102 ntBASIC1.77□□□□□ -2.13
HOXD8P13378 RNU6-1241P-201ENST00000384536 107 ntBASIC1.77□□□□□ -2.13
HOXD8P13378 RNU6-540P-201ENST00000384622 101 ntBASIC1.77□□□□□ -2.13
HOXD8P13378 RNU6-663P-201ENST00000391105 106 ntBASIC1.77□□□□□ -2.13
HOXD8P13378 RNU7-90P-201ENST00000459216 62 ntBASIC1.77□□□□□ -2.13
HOXD8P13378 AL157834.3-201ENST00000615543 103 ntBASIC1.77□□□□□ -2.13
HOXD8P13378 ZNF209P-201ENST00000593450 2304 ntBASIC1.76□□□□□ -2.13
HOXD8P13378 RNU6-664P-201ENST00000362381 107 ntBASIC1.76□□□□□ -2.13
HOXD8P13378 MIR222-201ENST00000384992 110 ntBASIC1.76□□□□□ -2.13
HOXD8P13378 RNU1-119P-201ENST00000391122 165 ntBASIC1.76□□□□□ -2.13
HOXD8P13378 SNORD90-201ENST00000391145 111 ntBASIC1.76□□□□□ -2.13
HOXD8P13378 RNU7-21P-201ENST00000459430 62 ntBASIC1.76□□□□□ -2.13
HOXD8P13378 RNU6-1057P-201ENST00000517162 102 ntBASIC1.76□□□□□ -2.13
HOXD8P13378 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.76□□□□□ -2.13
HOXD8P13378 Y_RNA.363-201ENST00000365529 113 ntBASIC1.75□□□□□ -2.13
HOXD8P13378 RNU6-291P-201ENST00000384720 107 ntBASIC1.75□□□□□ -2.13
HOXD8P13378 Y_RNA.606-201ENST00000410579 103 ntBASIC1.75□□□□□ -2.13
HOXD8P13378 RNU7-102P-201ENST00000458948 62 ntBASIC1.75□□□□□ -2.13
HOXD8P13378 RNU6-902P-201ENST00000517212 91 ntBASIC1.75□□□□□ -2.13
HOXD8P13378 SNORD53B-201ENST00000577887 78 ntBASIC1.75□□□□□ -2.13
HOXD8P13378 MIR8053-201ENST00000613344 75 ntBASIC1.75□□□□□ -2.13
HOXD8P13378 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXD8P13378 MIR1-1-201ENST00000362147 71 ntBASIC1.74□□□□□ -2.13
HOXD8P13378 RNU6-340P-201ENST00000364005 107 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 270.3 ms