Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 RNA5SP128-201ENST00000365305 116 ntBASIC0.12□□□□□ -2.39
ACTN1P12814 RNU6-127P-201ENST00000390897 107 ntBASIC0.12□□□□□ -2.39
ACTN1P12814 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.12□□□□□ -2.39
ACTN1P12814 Y_RNA.35-201ENST00000362601 101 ntBASIC0.11□□□□□ -2.39
ACTN1P12814 RNU6-1260P-201ENST00000362944 107 ntBASIC0.11□□□□□ -2.39
ACTN1P12814 MIR519A1-201ENST00000385257 85 ntBASIC0.11□□□□□ -2.39
ACTN1P12814 SNORD41.1-201ENST00000391000 69 ntBASIC0.11□□□□□ -2.39
ACTN1P12814 RNU6-848P-201ENST00000515948 107 ntBASIC0.11□□□□□ -2.39
ACTN1P12814 RNU6-617P-201ENST00000516147 107 ntBASIC0.11□□□□□ -2.39
ACTN1P12814 RNU6-473P-201ENST00000516164 107 ntBASIC0.11□□□□□ -2.39
ACTN1P12814 RNU7-13P-201ENST00000516413 62 ntBASIC0.11□□□□□ -2.39
ACTN1P12814 RNU6-1049P-201ENST00000516414 107 ntBASIC0.11□□□□□ -2.39
ACTN1P12814 RNU6-1006P-201ENST00000516998 103 ntBASIC0.11□□□□□ -2.39
ACTN1P12814 MIR548G-201ENST00000408442 89 ntBASIC0.1□□□□□ -2.39
ACTN1P12814 RNU6-1265P-201ENST00000516342 103 ntBASIC0.1□□□□□ -2.39
ACTN1P12814 AC104408.1-201ENST00000605241 170 ntBASIC0.1□□□□□ -2.39
ACTN1P12814 AL035470.1-201ENST00000622571 220 ntBASIC0.1□□□□□ -2.39
ACTN1P12814 Y_RNA.57-201ENST00000362806 113 ntBASIC0.09□□□□□ -2.4
ACTN1P12814 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
ACTN1P12814 SNORD38.1-201ENST00000363863 68 ntBASIC0.09□□□□□ -2.4
ACTN1P12814 Y_RNA.323-201ENST00000365157 109 ntBASIC0.09□□□□□ -2.4
ACTN1P12814 RNU6-90P-201ENST00000606352 106 ntBASIC0.09□□□□□ -2.4
ACTN1P12814 AL162726.3-218ENST00000636401 95 ntBASIC0.09□□□□□ -2.4
ACTN1P12814 AL161932.1-201ENST00000437408 146 ntBASIC0.08□□□□□ -2.4
ACTN1P12814 Y_RNA.703-201ENST00000516846 111 ntBASIC0.08□□□□□ -2.4
ACTN1P12814 NAMPTP3-201ENST00000569273 224 ntBASIC0.08□□□□□ -2.4
ACTN1P12814 MIR3920-201ENST00000581751 86 ntBASIC0.08□□□□□ -2.4
ACTN1P12814 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.08□□□□□ -2.4
ACTN1P12814 SNORD114-5-201ENST00000362928 70 ntBASIC0.07□□□□□ -2.4
ACTN1P12814 RNU6-1201P-201ENST00000384227 107 ntBASIC0.07□□□□□ -2.4
ACTN1P12814 RNA5SP484-201ENST00000458857 111 ntBASIC0.07□□□□□ -2.4
ACTN1P12814 Y_RNA.649-201ENST00000459077 103 ntBASIC0.07□□□□□ -2.4
ACTN1P12814 MIR371B-201ENST00000638082 66 ntBASIC0.07□□□□□ -2.4
ACTN1P12814 Y_RNA.218-201ENST00000364218 104 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 Y_RNA.549-201ENST00000384657 102 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 MIR548A1-201ENST00000385041 97 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 RNU6-1254P-201ENST00000391266 104 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 MIR1912-201ENST00000410389 80 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 AC006210.1-201ENST00000424882 111 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 SNORD33.1-201ENST00000516213 88 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 RNU6-1018P-201ENST00000516577 106 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 AC007012.1-201ENST00000567192 175 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 MIR4636-201ENST00000582271 80 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 AL442128.1-201ENST00000615151 90 ntBASIC0.06□□□□□ -2.4
ACTN1P12814 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
ACTN1P12814 RNU6-80P-201ENST00000384195 107 ntBASIC0.05□□□□□ -2.4
ACTN1P12814 MIR501-201ENST00000390204 84 ntBASIC0.05□□□□□ -2.4
ACTN1P12814 RNU6-243P-201ENST00000391140 107 ntBASIC0.05□□□□□ -2.4
ACTN1P12814 MIR1265-201ENST00000408444 86 ntBASIC0.05□□□□□ -2.4
ACTN1P12814 MIR3914-2-201ENST00000637339 95 ntBASIC0.05□□□□□ -2.4
ACTN1P12814 AC073869.9-201ENST00000641610 120 ntBASIC0.05□□□□□ -2.4
ACTN1P12814 Y_RNA.71-201ENST00000362892 104 ntBASIC0.04□□□□□ -2.4
ACTN1P12814 MIR593-201ENST00000384856 100 ntBASIC0.04□□□□□ -2.4
ACTN1P12814 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
ACTN1P12814 SNORD110-201ENST00000408189 75 ntBASIC0.04□□□□□ -2.4
ACTN1P12814 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.04□□□□□ -2.4
ACTN1P12814 MIR5589-201ENST00000579442 60 ntBASIC0.04□□□□□ -2.4
ACTN1P12814 MIR5706-201ENST00000579841 80 ntBASIC0.04□□□□□ -2.4
ACTN1P12814 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.4
ACTN1P12814 RNU6-509P-201ENST00000363519 107 ntBASIC0.03□□□□□ -2.4
ACTN1P12814 TRDV1-202ENST00000621643 102 ntBASIC0.03□□□□□ -2.4
ACTN1P12814 Y_RNA.173-201ENST00000363776 113 ntBASIC0.02□□□□□ -2.41
ACTN1P12814 Y_RNA.309-201ENST00000365046 111 ntBASIC0.02□□□□□ -2.41
ACTN1P12814 RNU6-1062P-201ENST00000383908 107 ntBASIC0.02□□□□□ -2.41
ACTN1P12814 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
ACTN1P12814 uc_338.28-201ENST00000612082 187 ntBASIC0.02□□□□□ -2.41
ACTN1P12814 SNORD36A-201ENST00000362874 73 ntBASIC0.01□□□□□ -2.41
ACTN1P12814 MIR577-201ENST00000385196 96 ntBASIC0.01□□□□□ -2.41
ACTN1P12814 MIR548A3-201ENST00000385297 97 ntBASIC0.01□□□□□ -2.41
ACTN1P12814 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.01□□□□□ -2.41
ACTN1P12814 RNU6-659P-201ENST00000516454 104 ntBASIC0.01□□□□□ -2.41
ACTN1P12814 Y_RNA.712-201ENST00000517011 92 ntBASIC0.01□□□□□ -2.41
ACTN1P12814 MIR548AG2-201ENST00000581228 64 ntBASIC0.01□□□□□ -2.41
ACTN1P12814 U7.6-201ENST00000610841 64 ntBASIC0.01□□□□□ -2.41
ACTN1P12814 RNU6-1163P-201ENST00000364516 107 ntBASIC0□□□□□ -2.41
ACTN1P12814 RNU6-746P-201ENST00000384112 109 ntBASIC0□□□□□ -2.41
ACTN1P12814 MIR548H2-201ENST00000408874 88 ntBASIC0□□□□□ -2.41
ACTN1P12814 RNU7-74P-201ENST00000459104 62 ntBASIC0□□□□□ -2.41
ACTN1P12814 Y_RNA.659-201ENST00000515994 113 ntBASIC0□□□□□ -2.41
ACTN1P12814 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
ACTN1P12814 AC096720.1-201ENST00000604441 183 ntBASIC0□□□□□ -2.41
ACTN1P12814 RNU6-957P-201ENST00000363652 99 ntBASIC-0.01□□□□□ -2.41
ACTN1P12814 RNU6-704P-201ENST00000364162 103 ntBASIC-0.01□□□□□ -2.41
ACTN1P12814 MIR145-201ENST00000384967 88 ntBASIC-0.01□□□□□ -2.41
ACTN1P12814 AC068339.1-201ENST00000526965 141 ntBASIC-0.01□□□□□ -2.41
ACTN1P12814 U6.100-201ENST00000636230 99 ntBASIC-0.01□□□□□ -2.41
ACTN1P12814 U6.95-201ENST00000636931 70 ntBASIC-0.01□□□□□ -2.41
ACTN1P12814 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
ACTN1P12814 RNU6-161P-201ENST00000363051 106 ntBASIC-0.02□□□□□ -2.41
ACTN1P12814 RNU6-652P-201ENST00000365488 107 ntBASIC-0.02□□□□□ -2.41
ACTN1P12814 SNORA51.5-201ENST00000384126 131 ntBASIC-0.02□□□□□ -2.41
ACTN1P12814 HMGN2P22-201ENST00000427588 175 ntBASIC-0.02□□□□□ -2.41
ACTN1P12814 RNU6-782P-201ENST00000516852 104 ntBASIC-0.02□□□□□ -2.41
ACTN1P12814 MIR4679-2-201ENST00000578358 77 ntBASIC-0.02□□□□□ -2.41
ACTN1P12814 MIR4677-201ENST00000584153 80 ntBASIC-0.02□□□□□ -2.41
ACTN1P12814 MIR4743-201ENST00000584576 69 ntBASIC-0.02□□□□□ -2.41
ACTN1P12814 MIR548AD-201ENST00000584780 82 ntBASIC-0.02□□□□□ -2.41
ACTN1P12814 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.03□□□□□ -2.41
ACTN1P12814 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.03□□□□□ -2.41
ACTN1P12814 SNORD115-44-201ENST00000365391 82 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 256.3 ms