Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 AP000240.1-201ENST00000609910 452 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 RNU6-478P-201ENST00000363904 110 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 RNU4-68P-201ENST00000364314 141 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 SNORA33.1-201ENST00000364957 130 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 MIR520D-201ENST00000385002 87 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 MIR526A2-201ENST00000390198 65 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 AC138393.2-201ENST00000414742 246 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 RNU7-110P-201ENST00000516891 62 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 MIR3657-201ENST00000584818 117 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 U6.106-201ENST00000636360 105 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 RNU6-931P-201ENST00000363850 107 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 RNU6-382P-201ENST00000365181 106 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 ZNF519P2-201ENST00000557032 169 ntBASIC-1.21□□□□□ -2.6
COL6A3P12111 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 MIR363-201ENST00000384840 75 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 MIR548G-201ENST00000408442 89 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 AC019235.1-201ENST00000503847 207 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 MTND3P22-201ENST00000510932 243 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 AC119751.7-201ENST00000600494 245 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 AC093424.1-201ENST00000604999 338 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 AC025521.1-201ENST00000621624 286 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
COL6A3P12111 RNU6-415P-201ENST00000516252 97 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 MIR548AB-201ENST00000584917 84 ntBASIC-1.22□□□□□ -2.6
COL6A3P12111 RNU6-132P-201ENST00000383863 107 ntBASIC-1.22□□□□□ -2.61
COL6A3P12111 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.22□□□□□ -2.61
COL6A3P12111 RNU6-306P-201ENST00000384617 107 ntBASIC-1.22□□□□□ -2.61
COL6A3P12111 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.22□□□□□ -2.61
COL6A3P12111 MIR548U-201ENST00000390728 81 ntBASIC-1.22□□□□□ -2.61
COL6A3P12111 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 RNU6-518P-201ENST00000516056 96 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 AP003461.1-201ENST00000528866 78 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 MIR3170-201ENST00000582699 77 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 RNU6-818P-201ENST00000364837 108 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 RNU6-106P-201ENST00000384405 107 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 RNU6-141P-201ENST00000410499 105 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 AL118496.2-201ENST00000448300 230 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 RNU6-976P-201ENST00000516086 111 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 AC005520.4-201ENST00000604337 90 ntBASIC-1.23□□□□□ -2.61
COL6A3P12111 RNU6-832P-201ENST00000363319 107 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 MTATP6P21-201ENST00000440681 189 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 RNU6-521P-201ENST00000516663 105 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 DEFB117-201ENST00000602356 141 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 AL138825.1-201ENST00000618587 192 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 AC022079.1-201ENST00000621546 602 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 RNU6-766P-201ENST00000362478 107 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 MIR548A3-201ENST00000385297 97 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 AL593851.1-201ENST00000426171 157 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 AL691482.2-201ENST00000457453 84 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 RNU6-89P-201ENST00000606519 100 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 SNORD113-5-201ENST00000607261 78 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 RNU6-101P-201ENST00000410323 104 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 RNU6-273P-201ENST00000516937 96 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 VN1R91P-201ENST00000594377 169 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 C8orf59P2-201ENST00000603441 271 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 U6.97-201ENST00000636904 101 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 AC073869.6-201ENST00000640656 341 ntBASIC-1.24□□□□□ -2.61
COL6A3P12111 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 AL731563.1-201ENST00000442202 214 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 RNU7-66P-201ENST00000459469 62 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 AC082651.2-201ENST00000496833 166 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 MTCO2P4-201ENST00000517968 247 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 MIR5688-201ENST00000580619 83 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms