Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 Y_RNA.809-201ENST00000516058 95 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 RNU1-92P-201ENST00000517017 135 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 U6.100-201ENST00000636230 99 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-1241P-201ENST00000384536 107 ntBASIC2.14□□□□□ -2.07
CSB-PGBD3P0DP91 SNORD83.1-201ENST00000411362 77 ntBASIC2.14□□□□□ -2.07
CSB-PGBD3P0DP91 MIR3140-201ENST00000583685 90 ntBASIC2.14□□□□□ -2.07
CSB-PGBD3P0DP91 MIR6082-201ENST00000613604 109 ntBASIC2.14□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-1260P-201ENST00000362944 107 ntBASIC2.13□□□□□ -2.07
CSB-PGBD3P0DP91 SNORD115-31-201ENST00000365318 82 ntBASIC2.13□□□□□ -2.07
CSB-PGBD3P0DP91 MIR548H5-201ENST00000580314 60 ntBASIC2.13□□□□□ -2.07
CSB-PGBD3P0DP91 MIR4696-201ENST00000581431 70 ntBASIC2.13□□□□□ -2.07
CSB-PGBD3P0DP91 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.42-201ENST00000362660 108 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 SNORA7.1-201ENST00000363750 139 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-392P-201ENST00000364926 101 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-154P-201ENST00000384306 106 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-649P-201ENST00000384463 107 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.697-201ENST00000516776 113 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-664P-201ENST00000362381 107 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.36-201ENST00000362602 112 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.56-201ENST00000362798 112 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.239-201ENST00000364444 113 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.371-201ENST00000365591 113 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 MIR489-201ENST00000384923 84 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 MIR2113-201ENST00000459007 91 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-340P-201ENST00000364005 107 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.330-201ENST00000365230 109 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 SNORD101-201ENST00000384027 73 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 SNORA8.1-201ENST00000384250 140 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 SNORD30.1-201ENST00000391309 70 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 MIR1323-201ENST00000408090 73 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 MIR1257-201ENST00000408490 117 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 AL157834.3-201ENST00000615543 103 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-291P-201ENST00000384720 107 ntBASIC2.09□□□□□ -2.07
CSB-PGBD3P0DP91 MIR942-201ENST00000401111 86 ntBASIC2.09□□□□□ -2.07
CSB-PGBD3P0DP91 MIR1276-201ENST00000408707 83 ntBASIC2.09□□□□□ -2.07
CSB-PGBD3P0DP91 RNU7-10P-201ENST00000607194 63 ntBASIC2.09□□□□□ -2.07
CSB-PGBD3P0DP91 MIR154-201ENST00000385243 84 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 SNORA75.2-201ENST00000391138 150 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 SNORA75.3-201ENST00000391231 150 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 MIR4421-201ENST00000578133 69 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 MTRNR2L2-201ENST00000604882 87 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 Y_RNA.363-201ENST00000365529 113 ntBASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 MIR517C-201ENST00000385103 95 ntBASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 SNORA31.24-201ENST00000517232 57 ntBASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 AC012493.3-201ENST00000604494 112 ntBASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 U6.111-201ENST00000636093 83 ntBASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-800P-201ENST00000384473 103 ntBASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-910P-201ENST00000390844 107 ntBASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 AC097635.1-201ENST00000450678 155 ntBASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-765P-201ENST00000516916 99 ntBASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 MIR6504-201ENST00000613520 61 ntBASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 RNA5SP245-201ENST00000364239 121 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-934P-201ENST00000365154 107 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 MIR599-201ENST00000385069 95 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 SUMO2P12-201ENST00000405924 140 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 RNU2-59P-201ENST00000410482 191 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 AL591704.2-201ENST00000421658 181 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 snoU13.18-201ENST00000459483 104 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 AC036111.3-201ENST00000526389 112 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 MIR4771-2-201ENST00000577758 74 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 MIR4771-1-201ENST00000582617 74 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 Y_RNA.205-201ENST00000364128 113 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 SNORA24B-201ENST00000384176 131 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 MIR125B2-201ENST00000385128 89 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-663P-201ENST00000391105 106 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-1052P-201ENST00000411398 104 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-719P-201ENST00000516671 104 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 RNU7-156P-201ENST00000517214 74 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-824P-201ENST00000363724 104 ntBASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 RNY4P3-201ENST00000365254 95 ntBASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 SNORA80D-201ENST00000384488 135 ntBASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-1265P-201ENST00000516342 103 ntBASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 SNORD113.3-201ENST00000364630 78 ntBASIC2.02□□□□□ -2.09
CSB-PGBD3P0DP91 SNORD48-201ENST00000364953 64 ntBASIC2.02□□□□□ -2.09
CSB-PGBD3P0DP91 Y_RNA.606-201ENST00000410579 103 ntBASIC2.02□□□□□ -2.09
CSB-PGBD3P0DP91 RNU6-935P-201ENST00000410371 100 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 AL354695.1-201ENST00000427935 228 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 RNU7-21P-201ENST00000459430 62 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 SNORA70.22-201ENST00000517160 124 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 AC138907.6-201ENST00000568401 126 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 AC138869.1-201ENST00000568623 124 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CSB-PGBD3P0DP91 MIR451A-201ENST00000385059 72 ntBASIC2□□□□□ -2.09
CSB-PGBD3P0DP91 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms