Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 Y_RNA.679-201ENST00000516416 91 ntBASIC-2□□□□□ -2.73
APOEP02649 RNU6-935P-201ENST00000410371 100 ntBASIC-2.01□□□□□ -2.73
APOEP02649 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.01□□□□□ -2.73
APOEP02649 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.02□□□□□ -2.73
APOEP02649 Y_RNA.326-201ENST00000365176 113 ntBASIC-2.02□□□□□ -2.73
APOEP02649 RNU6-337P-201ENST00000391243 106 ntBASIC-2.02□□□□□ -2.73
APOEP02649 FGF7P6-202ENST00000451282 293 ntBASIC-2.02□□□□□ -2.73
APOEP02649 RNA5SP461-201ENST00000516451 104 ntBASIC-2.02□□□□□ -2.73
APOEP02649 RNU6-235P-201ENST00000362644 107 ntBASIC-2.03□□□□□ -2.73
APOEP02649 AP002392.1-201ENST00000537692 208 ntBASIC-2.03□□□□□ -2.73
APOEP02649 MIR4282-201ENST00000583613 67 ntBASIC-2.03□□□□□ -2.73
APOEP02649 RNU6-588P-201ENST00000410281 105 ntBASIC-2.04□□□□□ -2.74
APOEP02649 MTATP6P21-201ENST00000440681 189 ntBASIC-2.04□□□□□ -2.74
APOEP02649 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.04□□□□□ -2.74
APOEP02649 RNY4P20-201ENST00000516678 93 ntBASIC-2.04□□□□□ -2.74
APOEP02649 Y_RNA.121-201ENST00000363309 113 ntBASIC-2.05□□□□□ -2.74
APOEP02649 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.05□□□□□ -2.74
APOEP02649 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.05□□□□□ -2.74
APOEP02649 MIR451A-201ENST00000385059 72 ntBASIC-2.05□□□□□ -2.74
APOEP02649 RNU6-466P-201ENST00000391224 103 ntBASIC-2.05□□□□□ -2.74
APOEP02649 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.05□□□□□ -2.74
APOEP02649 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.05□□□□□ -2.74
APOEP02649 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.05□□□□□ -2.74
APOEP02649 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.06□□□□□ -2.74
APOEP02649 AC113618.1-201ENST00000416747 285 ntBASIC-2.06□□□□□ -2.74
APOEP02649 MTND3P22-201ENST00000510932 243 ntBASIC-2.06□□□□□ -2.74
APOEP02649 MIR4770-201ENST00000579149 58 ntBASIC-2.06□□□□□ -2.74
APOEP02649 MIR6129-201ENST00000616087 109 ntBASIC-2.06□□□□□ -2.74
APOEP02649 MIR198-201ENST00000637333 62 ntBASIC-2.06□□□□□ -2.74
APOEP02649 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.07□□□□□ -2.74
APOEP02649 RNU6-226P-201ENST00000363778 107 ntBASIC-2.07□□□□□ -2.74
APOEP02649 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.07□□□□□ -2.74
APOEP02649 RNU7-6P-201ENST00000516845 62 ntBASIC-2.07□□□□□ -2.74
APOEP02649 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.07□□□□□ -2.74
APOEP02649 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.07□□□□□ -2.74
APOEP02649 U2.14-201ENST00000615943 113 ntBASIC-2.07□□□□□ -2.74
APOEP02649 AC090971.5-201ENST00000621102 293 ntBASIC-2.07□□□□□ -2.74
APOEP02649 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.07□□□□□ -2.74
APOEP02649 RNU6-508P-201ENST00000363231 103 ntBASIC-2.08□□□□□ -2.74
APOEP02649 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.08□□□□□ -2.74
APOEP02649 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.08□□□□□ -2.74
APOEP02649 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.08□□□□□ -2.74
APOEP02649 FGF7P4-201ENST00000509595 295 ntBASIC-2.08□□□□□ -2.74
APOEP02649 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.09□□□□□ -2.74
APOEP02649 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.09□□□□□ -2.74
APOEP02649 SNORA63.6-201ENST00000364921 119 ntBASIC-2.09□□□□□ -2.74
APOEP02649 SNORA62.4-201ENST00000365504 151 ntBASIC-2.09□□□□□ -2.74
APOEP02649 MIR889-201ENST00000401280 79 ntBASIC-2.09□□□□□ -2.74
APOEP02649 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.09□□□□□ -2.74
APOEP02649 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.09□□□□□ -2.74
APOEP02649 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.1□□□□□ -2.75
APOEP02649 MIR527-201ENST00000385244 85 ntBASIC-2.1□□□□□ -2.75
APOEP02649 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.1□□□□□ -2.75
APOEP02649 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.1□□□□□ -2.75
APOEP02649 MIR4520-1-201ENST00000582609 70 ntBASIC-2.1□□□□□ -2.75
APOEP02649 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.11□□□□□ -2.75
APOEP02649 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.11□□□□□ -2.75
APOEP02649 RNU6-818P-201ENST00000364837 108 ntBASIC-2.11□□□□□ -2.75
APOEP02649 RNY3P16-201ENST00000516338 101 ntBASIC-2.11□□□□□ -2.75
APOEP02649 RNU6-90P-201ENST00000606352 106 ntBASIC-2.11□□□□□ -2.75
APOEP02649 RNU6-208P-201ENST00000362431 107 ntBASIC-2.12□□□□□ -2.75
APOEP02649 RNU6-768P-201ENST00000384683 107 ntBASIC-2.12□□□□□ -2.75
APOEP02649 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.12□□□□□ -2.75
APOEP02649 U3.27-201ENST00000391237 200 ntBASIC-2.12□□□□□ -2.75
APOEP02649 MIR548G-201ENST00000408442 89 ntBASIC-2.12□□□□□ -2.75
APOEP02649 Z83846.1-201ENST00000446798 265 ntBASIC-2.12□□□□□ -2.75
APOEP02649 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.12□□□□□ -2.75
APOEP02649 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.13□□□□□ -2.75
APOEP02649 SNORD115-19-201ENST00000363098 82 ntBASIC-2.13□□□□□ -2.75
APOEP02649 SNORD115-18-201ENST00000363293 82 ntBASIC-2.13□□□□□ -2.75
APOEP02649 SNORD115-17-201ENST00000364612 82 ntBASIC-2.13□□□□□ -2.75
APOEP02649 RNY3P1-201ENST00000365085 102 ntBASIC-2.13□□□□□ -2.75
APOEP02649 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.13□□□□□ -2.75
APOEP02649 SNORD116-4-201ENST00000384733 96 ntBASIC-2.13□□□□□ -2.75
APOEP02649 MIR1255B1-201ENST00000636325 63 ntBASIC-2.13□□□□□ -2.75
APOEP02649 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.14□□□□□ -2.75
APOEP02649 RNU6-647P-201ENST00000364243 107 ntBASIC-2.14□□□□□ -2.75
APOEP02649 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.14□□□□□ -2.75
APOEP02649 RNU6-576P-201ENST00000390854 102 ntBASIC-2.14□□□□□ -2.75
APOEP02649 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.14□□□□□ -2.75
APOEP02649 RNA5SP180-201ENST00000516181 101 ntBASIC-2.14□□□□□ -2.75
APOEP02649 RNU6-719P-201ENST00000516671 104 ntBASIC-2.14□□□□□ -2.75
APOEP02649 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.15□□□□□ -2.75
APOEP02649 MIR29B1-201ENST00000385015 81 ntBASIC-2.15□□□□□ -2.75
APOEP02649 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.15□□□□□ -2.75
APOEP02649 YWHAEP3-201ENST00000582767 121 ntBASIC-2.15□□□□□ -2.75
APOEP02649 AL137067.1-201ENST00000615933 120 ntBASIC-2.15□□□□□ -2.75
APOEP02649 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.16□□□□□ -2.76
APOEP02649 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.16□□□□□ -2.76
APOEP02649 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.16□□□□□ -2.76
APOEP02649 MIR601-201ENST00000385256 79 ntBASIC-2.16□□□□□ -2.76
APOEP02649 MT-TI-201ENST00000387365 69 ntBASIC-2.16□□□□□ -2.76
APOEP02649 RNU6-493P-201ENST00000391321 108 ntBASIC-2.16□□□□□ -2.76
APOEP02649 SNORA7.5-201ENST00000410672 110 ntBASIC-2.16□□□□□ -2.76
APOEP02649 MIR4464-201ENST00000580818 92 ntBASIC-2.16□□□□□ -2.76
APOEP02649 MIR1246-201ENST00000636535 73 ntBASIC-2.16□□□□□ -2.76
APOEP02649 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.17□□□□□ -2.76
APOEP02649 RNU6-309P-201ENST00000364573 106 ntBASIC-2.17□□□□□ -2.76
APOEP02649 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.17□□□□□ -2.76
APOEP02649 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms