Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 MIR3920-201ENST00000581751 86 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 RNU6-90P-201ENST00000606352 106 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.05□□□□□ -2.42
DDX58O95786 MIR145-201ENST00000384967 88 ntBASIC-0.05□□□□□ -2.42
DDX58O95786 MIR892B-201ENST00000401279 77 ntBASIC-0.05□□□□□ -2.42
DDX58O95786 RNU6-346P-201ENST00000516288 111 ntBASIC-0.05□□□□□ -2.42
DDX58O95786 RNU6-782P-201ENST00000516852 104 ntBASIC-0.05□□□□□ -2.42
DDX58O95786 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.06□□□□□ -2.42
DDX58O95786 MIR501-201ENST00000390204 84 ntBASIC-0.06□□□□□ -2.42
DDX58O95786 RNU6-243P-201ENST00000391140 107 ntBASIC-0.06□□□□□ -2.42
DDX58O95786 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 SNORD38.1-201ENST00000363863 68 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
DDX58O95786 RNU6-816P-201ENST00000390914 107 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 MIR548G-201ENST00000408442 89 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 RNA5SP484-201ENST00000458857 111 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 RNU6-255P-201ENST00000516957 105 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 AC141557.1-201ENST00000540982 400 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 MIR3671-201ENST00000580455 88 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 MIR4636-201ENST00000582271 80 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 MIR4743-201ENST00000584576 69 ntBASIC-0.07□□□□□ -2.42
DDX58O95786 RNU6-257P-201ENST00000410238 98 ntBASIC-0.08□□□□□ -2.42
DDX58O95786 uc_338.28-201ENST00000612082 187 ntBASIC-0.08□□□□□ -2.42
DDX58O95786 MIR539-201ENST00000365690 78 ntBASIC-0.09□□□□□ -2.42
DDX58O95786 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.09□□□□□ -2.42
DDX58O95786 MIR4802-201ENST00000581881 80 ntBASIC-0.09□□□□□ -2.42
DDX58O95786 MIR548AD-201ENST00000584780 82 ntBASIC-0.09□□□□□ -2.42
DDX58O95786 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.1□□□□□ -2.43
DDX58O95786 MIR1912-201ENST00000410389 80 ntBASIC-0.1□□□□□ -2.43
DDX58O95786 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.1□□□□□ -2.43
DDX58O95786 MIR5589-201ENST00000579442 60 ntBASIC-0.1□□□□□ -2.43
DDX58O95786 AL157777.2-201ENST00000258070 137 ntBASIC-0.11□□□□□ -2.43
DDX58O95786 SNORD115-44-201ENST00000365391 82 ntBASIC-0.11□□□□□ -2.43
DDX58O95786 RNU6-907P-201ENST00000390924 102 ntBASIC-0.11□□□□□ -2.43
DDX58O95786 MIR548H2-201ENST00000408874 88 ntBASIC-0.11□□□□□ -2.43
DDX58O95786 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.11□□□□□ -2.43
DDX58O95786 RNU6-772P-201ENST00000516042 105 ntBASIC-0.11□□□□□ -2.43
DDX58O95786 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.11□□□□□ -2.43
DDX58O95786 MIR4677-201ENST00000584153 80 ntBASIC-0.11□□□□□ -2.43
DDX58O95786 AL162726.3-218ENST00000636401 95 ntBASIC-0.11□□□□□ -2.43
DDX58O95786 MIR6086-201ENST00000638065 55 ntBASIC-0.11□□□□□ -2.43
DDX58O95786 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.12□□□□□ -2.43
DDX58O95786 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.12□□□□□ -2.43
DDX58O95786 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.12□□□□□ -2.43
DDX58O95786 MIR3668-201ENST00000582138 75 ntBASIC-0.12□□□□□ -2.43
DDX58O95786 AL442128.1-201ENST00000615151 90 ntBASIC-0.12□□□□□ -2.43
DDX58O95786 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.13□□□□□ -2.43
DDX58O95786 RNU6V-201ENST00000384105 107 ntBASIC-0.13□□□□□ -2.43
DDX58O95786 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.13□□□□□ -2.43
DDX58O95786 RNA5SP163-201ENST00000410304 99 ntBASIC-0.13□□□□□ -2.43
DDX58O95786 AL161932.1-201ENST00000437408 146 ntBASIC-0.13□□□□□ -2.43
DDX58O95786 AL353813.1-201ENST00000440700 253 ntBASIC-0.13□□□□□ -2.43
DDX58O95786 RNU7-159P-201ENST00000459284 62 ntBASIC-0.13□□□□□ -2.43
DDX58O95786 RNU6-971P-201ENST00000516920 106 ntBASIC-0.13□□□□□ -2.43
DDX58O95786 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.13□□□□□ -2.43
DDX58O95786 AC084368.1-201ENST00000620935 65 ntBASIC-0.13□□□□□ -2.43
DDX58O95786 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.14□□□□□ -2.43
DDX58O95786 RNU1-141P-201ENST00000364623 158 ntBASIC-0.14□□□□□ -2.43
DDX58O95786 RNY1P5-201ENST00000383890 115 ntBASIC-0.14□□□□□ -2.43
DDX58O95786 RNU7-107P-201ENST00000459121 61 ntBASIC-0.14□□□□□ -2.43
DDX58O95786 AC096720.1-201ENST00000604441 183 ntBASIC-0.14□□□□□ -2.43
DDX58O95786 SNORD36A-201ENST00000362874 73 ntBASIC-0.15□□□□□ -2.43
DDX58O95786 RNU6-161P-201ENST00000363051 106 ntBASIC-0.15□□□□□ -2.43
DDX58O95786 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.15□□□□□ -2.43
DDX58O95786 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.15□□□□□ -2.43
DDX58O95786 MIR617-201ENST00000385030 97 ntBASIC-0.15□□□□□ -2.43
DDX58O95786 HMGN2P22-201ENST00000427588 175 ntBASIC-0.15□□□□□ -2.43
DDX58O95786 HAR1A.1-201ENST00000459583 118 ntBASIC-0.15□□□□□ -2.43
DDX58O95786 TRDV1-202ENST00000621643 102 ntBASIC-0.15□□□□□ -2.43
DDX58O95786 RNU6-756P-201ENST00000383997 107 ntBASIC-0.16□□□□□ -2.44
DDX58O95786 RNU6-929P-201ENST00000384429 107 ntBASIC-0.16□□□□□ -2.44
DDX58O95786 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.16□□□□□ -2.44
DDX58O95786 SNORA75.1-201ENST00000391130 148 ntBASIC-0.16□□□□□ -2.44
DDX58O95786 MIR3925-201ENST00000584674 77 ntBASIC-0.16□□□□□ -2.44
DDX58O95786 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
DDX58O95786 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.17□□□□□ -2.44
DDX58O95786 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.17□□□□□ -2.44
DDX58O95786 RNU6-209P-201ENST00000384118 107 ntBASIC-0.17□□□□□ -2.44
DDX58O95786 MIR519E-201ENST00000385075 84 ntBASIC-0.17□□□□□ -2.44
DDX58O95786 MIR516B1-201ENST00000385211 90 ntBASIC-0.17□□□□□ -2.44
DDX58O95786 MIR1265-201ENST00000408444 86 ntBASIC-0.17□□□□□ -2.44
DDX58O95786 RNU6-287P-201ENST00000516230 98 ntBASIC-0.17□□□□□ -2.44
DDX58O95786 MIR548AG2-201ENST00000581228 64 ntBASIC-0.17□□□□□ -2.44
DDX58O95786 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.17□□□□□ -2.44
DDX58O95786 RNU6-302P-201ENST00000365249 107 ntBASIC-0.18□□□□□ -2.44
DDX58O95786 MIR2113-201ENST00000459007 91 ntBASIC-0.18□□□□□ -2.44
DDX58O95786 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.18□□□□□ -2.44
DDX58O95786 SNORA25.13-201ENST00000516395 103 ntBASIC-0.18□□□□□ -2.44
DDX58O95786 AC007012.1-201ENST00000567192 175 ntBASIC-0.18□□□□□ -2.44
DDX58O95786 MIR4460-201ENST00000577862 86 ntBASIC-0.18□□□□□ -2.44
DDX58O95786 MIR4473-201ENST00000583731 91 ntBASIC-0.18□□□□□ -2.44
DDX58O95786 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
DDX58O95786 SNORA51.5-201ENST00000384126 131 ntBASIC-0.19□□□□□ -2.44
DDX58O95786 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 245.7 ms