Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-86P-201ENST00000606534 107 ntBASIC0.63□□□□□ -2.31
PRKNO60260 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
PRKNO60260 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
PRKNO60260 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
PRKNO60260 Y_RNA.342-201ENST00000365352 113 ntBASIC0.62□□□□□ -2.31
PRKNO60260 RNU6-905P-201ENST00000384434 107 ntBASIC0.62□□□□□ -2.31
PRKNO60260 RNU6-813P-201ENST00000384691 107 ntBASIC0.62□□□□□ -2.31
PRKNO60260 SNORD63B-201ENST00000411005 70 ntBASIC0.62□□□□□ -2.31
PRKNO60260 MTATP8P2-201ENST00000435212 202 ntBASIC0.62□□□□□ -2.31
PRKNO60260 AC092628.1-201ENST00000436250 252 ntBASIC0.62□□□□□ -2.31
PRKNO60260 TRAJ51-201ENST00000504127 63 ntBASIC0.62□□□□□ -2.31
PRKNO60260 RNU7-61P-201ENST00000515897 61 ntBASIC0.62□□□□□ -2.31
PRKNO60260 SNORA40.13-201ENST00000516379 120 ntBASIC0.62□□□□□ -2.31
PRKNO60260 RNU7-10P-201ENST00000607194 63 ntBASIC0.62□□□□□ -2.31
PRKNO60260 uc_338.16-201ENST00000621804 95 ntBASIC0.62□□□□□ -2.31
PRKNO60260 Y_RNA.57-201ENST00000362806 113 ntBASIC0.61□□□□□ -2.31
PRKNO60260 RNA5SP245-201ENST00000364239 121 ntBASIC0.61□□□□□ -2.31
PRKNO60260 MIR644A-201ENST00000385262 94 ntBASIC0.61□□□□□ -2.31
PRKNO60260 RNU6-644P-201ENST00000391155 98 ntBASIC0.61□□□□□ -2.31
PRKNO60260 Y_RNA.705-201ENST00000516862 110 ntBASIC0.61□□□□□ -2.31
PRKNO60260 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.61□□□□□ -2.31
PRKNO60260 AC103810.7-201ENST00000607821 91 ntBASIC0.61□□□□□ -2.31
PRKNO60260 Y_RNA.96-201ENST00000363092 109 ntBASIC0.6□□□□□ -2.31
PRKNO60260 RNU6-1125P-201ENST00000363601 107 ntBASIC0.6□□□□□ -2.31
PRKNO60260 Y_RNA.174-201ENST00000363781 105 ntBASIC0.6□□□□□ -2.31
PRKNO60260 RNU6-480P-201ENST00000384332 107 ntBASIC0.6□□□□□ -2.31
PRKNO60260 MIR635-201ENST00000384830 98 ntBASIC0.6□□□□□ -2.31
PRKNO60260 MIR516A2-201ENST00000384888 90 ntBASIC0.6□□□□□ -2.31
PRKNO60260 MIR181B2-201ENST00000385004 89 ntBASIC0.6□□□□□ -2.31
PRKNO60260 MIR516A1-201ENST00000385033 90 ntBASIC0.6□□□□□ -2.31
PRKNO60260 MIR519A1-201ENST00000385257 85 ntBASIC0.6□□□□□ -2.31
PRKNO60260 RNU6-469P-201ENST00000516253 101 ntBASIC0.6□□□□□ -2.31
PRKNO60260 MIR3678-201ENST00000578455 94 ntBASIC0.6□□□□□ -2.31
PRKNO60260 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
PRKNO60260 MIR2052-201ENST00000636055 55 ntBASIC0.6□□□□□ -2.31
PRKNO60260 MIR193B-201ENST00000384907 83 ntBASIC0.59□□□□□ -2.31
PRKNO60260 RNU6-972P-201ENST00000391208 107 ntBASIC0.59□□□□□ -2.31
PRKNO60260 RNU6-887P-201ENST00000410660 100 ntBASIC0.59□□□□□ -2.31
PRKNO60260 AC097635.1-201ENST00000450678 155 ntBASIC0.59□□□□□ -2.31
PRKNO60260 RNU7-195P-201ENST00000458793 62 ntBASIC0.59□□□□□ -2.31
PRKNO60260 RNU7-106P-201ENST00000459514 67 ntBASIC0.59□□□□□ -2.31
PRKNO60260 AC138869.1-201ENST00000568623 124 ntBASIC0.59□□□□□ -2.31
PRKNO60260 MIR6513-201ENST00000621188 64 ntBASIC0.59□□□□□ -2.31
PRKNO60260 AC025521.1-201ENST00000621624 286 ntBASIC0.59□□□□□ -2.31
PRKNO60260 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
PRKNO60260 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
PRKNO60260 RNU4-45P-201ENST00000365469 141 ntBASIC0.58□□□□□ -2.32
PRKNO60260 RNU6-1254P-201ENST00000391266 104 ntBASIC0.58□□□□□ -2.32
PRKNO60260 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
PRKNO60260 AC244505.6-201ENST00000452829 130 ntBASIC0.58□□□□□ -2.32
PRKNO60260 AL513043.2-201ENST00000573941 143 ntBASIC0.58□□□□□ -2.32
PRKNO60260 U7.3-201ENST00000616123 62 ntBASIC0.58□□□□□ -2.32
PRKNO60260 MALAT1.1-201ENST00000618249 95 ntBASIC0.58□□□□□ -2.32
PRKNO60260 SNORD36A-201ENST00000362874 73 ntBASIC0.57□□□□□ -2.32
PRKNO60260 Y_RNA.290-201ENST00000364879 114 ntBASIC0.57□□□□□ -2.32
PRKNO60260 MIR488-201ENST00000365739 83 ntBASIC0.57□□□□□ -2.32
PRKNO60260 MIR599-201ENST00000385069 95 ntBASIC0.57□□□□□ -2.32
PRKNO60260 MIR140-201ENST00000385282 100 ntBASIC0.57□□□□□ -2.32
PRKNO60260 Y_RNA.809-201ENST00000516058 95 ntBASIC0.57□□□□□ -2.32
PRKNO60260 RNU6-162P-201ENST00000516228 103 ntBASIC0.57□□□□□ -2.32
PRKNO60260 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.57□□□□□ -2.32
PRKNO60260 RNU6-1260P-201ENST00000362944 107 ntBASIC0.56□□□□□ -2.32
PRKNO60260 SNORD116-10-201ENST00000363791 102 ntBASIC0.56□□□□□ -2.32
PRKNO60260 SNORD58A-201ENST00000383875 65 ntBASIC0.56□□□□□ -2.32
PRKNO60260 RNU6-243P-201ENST00000391140 107 ntBASIC0.56□□□□□ -2.32
PRKNO60260 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.56□□□□□ -2.32
PRKNO60260 MIR1273G-201ENST00000577677 100 ntBASIC0.56□□□□□ -2.32
PRKNO60260 RNU6-1298P-201ENST00000362456 101 ntBASIC0.55□□□□□ -2.32
PRKNO60260 SNORD18A-201ENST00000363753 72 ntBASIC0.55□□□□□ -2.32
PRKNO60260 Y_RNA.694-201ENST00000516677 117 ntBASIC0.55□□□□□ -2.32
PRKNO60260 RNU6-135P-201ENST00000516769 101 ntBASIC0.55□□□□□ -2.32
PRKNO60260 RNA5SP94-201ENST00000516917 108 ntBASIC0.55□□□□□ -2.32
PRKNO60260 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.55□□□□□ -2.32
PRKNO60260 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.55□□□□□ -2.32
PRKNO60260 SNORD114-23-201ENST00000363536 72 ntBASIC0.54□□□□□ -2.32
PRKNO60260 Y_RNA.374-201ENST00000365606 101 ntBASIC0.54□□□□□ -2.32
PRKNO60260 MIR936-201ENST00000401264 98 ntBASIC0.54□□□□□ -2.32
PRKNO60260 Y_RNA.648-201ENST00000459455 110 ntBASIC0.54□□□□□ -2.32
PRKNO60260 RNU6-1265P-201ENST00000516342 103 ntBASIC0.54□□□□□ -2.32
PRKNO60260 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.54□□□□□ -2.32
PRKNO60260 Y_RNA.30-201ENST00000362572 97 ntBASIC0.53□□□□□ -2.32
PRKNO60260 SNORD115-24-201ENST00000363528 82 ntBASIC0.53□□□□□ -2.32
PRKNO60260 RNU6-1229P-201ENST00000364295 107 ntBASIC0.53□□□□□ -2.32
PRKNO60260 RNU6-1131P-201ENST00000364955 107 ntBASIC0.53□□□□□ -2.32
PRKNO60260 RNU6-524P-201ENST00000384270 107 ntBASIC0.53□□□□□ -2.32
PRKNO60260 snoU13.11-201ENST00000459219 104 ntBASIC0.53□□□□□ -2.32
PRKNO60260 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
PRKNO60260 MIR4639-201ENST00000584938 69 ntBASIC0.53□□□□□ -2.32
PRKNO60260 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.53□□□□□ -2.32
PRKNO60260 RNU6-957P-201ENST00000363652 99 ntBASIC0.52□□□□□ -2.33
PRKNO60260 Y_RNA.190-201ENST00000363964 101 ntBASIC0.52□□□□□ -2.33
PRKNO60260 Y_RNA.220-201ENST00000364244 109 ntBASIC0.52□□□□□ -2.33
PRKNO60260 Y_RNA.221-201ENST00000364248 96 ntBASIC0.52□□□□□ -2.33
PRKNO60260 Y_RNA.283-201ENST00000364798 112 ntBASIC0.52□□□□□ -2.33
PRKNO60260 RNU6-49P-201ENST00000384256 107 ntBASIC0.52□□□□□ -2.33
PRKNO60260 SNORD28-201ENST00000384706 75 ntBASIC0.52□□□□□ -2.33
PRKNO60260 RNY1P7-201ENST00000384743 110 ntBASIC0.52□□□□□ -2.33
PRKNO60260 RNU6-466P-201ENST00000391224 103 ntBASIC0.52□□□□□ -2.33
PRKNO60260 RNY4P30-201ENST00000410216 95 ntBASIC0.52□□□□□ -2.33
PRKNO60260 AL161932.1-201ENST00000437408 146 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 509.9 ms