Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNU7-61P-201ENST00000515897 61 ntBASIC0.66□□□□□ -2.3
PHGDHO43175 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.66□□□□□ -2.3
PHGDHO43175 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
PHGDHO43175 RNU6-1260P-201ENST00000362944 107 ntBASIC0.65□□□□□ -2.31
PHGDHO43175 RNU6-1125P-201ENST00000363601 107 ntBASIC0.65□□□□□ -2.31
PHGDHO43175 RNU6-480P-201ENST00000384332 107 ntBASIC0.65□□□□□ -2.31
PHGDHO43175 MIR518E-201ENST00000385252 88 ntBASIC0.65□□□□□ -2.31
PHGDHO43175 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
PHGDHO43175 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
PHGDHO43175 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
PHGDHO43175 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
PHGDHO43175 AL513043.2-201ENST00000573941 143 ntBASIC0.65□□□□□ -2.31
PHGDHO43175 Y_RNA.818-201ENST00000618813 71 ntBASIC0.65□□□□□ -2.31
PHGDHO43175 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.65□□□□□ -2.31
PHGDHO43175 RNA5SP403-201ENST00000363598 108 ntBASIC0.64□□□□□ -2.31
PHGDHO43175 RNU6-153P-201ENST00000364422 104 ntBASIC0.64□□□□□ -2.31
PHGDHO43175 Y_RNA.466-201ENST00000384294 113 ntBASIC0.64□□□□□ -2.31
PHGDHO43175 MIR548J-201ENST00000408833 112 ntBASIC0.64□□□□□ -2.31
PHGDHO43175 snoU13.11-201ENST00000459219 104 ntBASIC0.64□□□□□ -2.31
PHGDHO43175 RNU7-104P-201ENST00000459398 79 ntBASIC0.64□□□□□ -2.31
PHGDHO43175 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.64□□□□□ -2.31
PHGDHO43175 AP001318.4-201ENST00000616637 121 ntBASIC0.64□□□□□ -2.31
PHGDHO43175 Y_RNA.93-201ENST00000363066 109 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 Y_RNA.107-201ENST00000363190 121 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 RNU6-957P-201ENST00000363652 99 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 RNU6-42P-201ENST00000384165 107 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 Y_RNA.495-201ENST00000384435 112 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
PHGDHO43175 RNU6-162P-201ENST00000516228 103 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 RNA5SP268-201ENST00000516828 124 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 SCARNA16.5-201ENST00000517114 183 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 RNU6-1223P-201ENST00000517124 104 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.63□□□□□ -2.31
PHGDHO43175 RNU6-716P-201ENST00000365621 103 ntBASIC0.62□□□□□ -2.31
PHGDHO43175 SNORA8.2-201ENST00000384372 139 ntBASIC0.62□□□□□ -2.31
PHGDHO43175 Y_RNA.544-201ENST00000384650 113 ntBASIC0.62□□□□□ -2.31
PHGDHO43175 MTATP8P2-201ENST00000435212 202 ntBASIC0.62□□□□□ -2.31
PHGDHO43175 SNORA25.18-201ENST00000607153 114 ntBASIC0.62□□□□□ -2.31
PHGDHO43175 MIR6734-201ENST00000621166 68 ntBASIC0.62□□□□□ -2.31
PHGDHO43175 MIR6828-201ENST00000636181 60 ntBASIC0.62□□□□□ -2.31
PHGDHO43175 SNORA40.8-201ENST00000411034 126 ntBASIC0.61□□□□□ -2.31
PHGDHO43175 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
PHGDHO43175 RNA5SP227-201ENST00000516184 113 ntBASIC0.61□□□□□ -2.31
PHGDHO43175 Y_RNA.705-201ENST00000516862 110 ntBASIC0.61□□□□□ -2.31
PHGDHO43175 MIR5000-201ENST00000577717 103 ntBASIC0.61□□□□□ -2.31
PHGDHO43175 Y_RNA.348-201ENST00000365403 103 ntBASIC0.6□□□□□ -2.31
PHGDHO43175 SNORD58A-201ENST00000383875 65 ntBASIC0.6□□□□□ -2.31
PHGDHO43175 RNU6-32P-201ENST00000383948 107 ntBASIC0.6□□□□□ -2.31
PHGDHO43175 RNU6-13P-201ENST00000384248 107 ntBASIC0.6□□□□□ -2.31
PHGDHO43175 RNU6-12P-201ENST00000384604 107 ntBASIC0.6□□□□□ -2.31
PHGDHO43175 RNU6-41P-201ENST00000384741 107 ntBASIC0.6□□□□□ -2.31
PHGDHO43175 RN7SKP12-201ENST00000516275 143 ntBASIC0.6□□□□□ -2.31
PHGDHO43175 RNU6-726P-201ENST00000364680 107 ntBASIC0.59□□□□□ -2.31
PHGDHO43175 RNU6-887P-201ENST00000410660 100 ntBASIC0.59□□□□□ -2.31
PHGDHO43175 MIR7107-201ENST00000611489 80 ntBASIC0.59□□□□□ -2.31
PHGDHO43175 U7.3-201ENST00000616123 62 ntBASIC0.59□□□□□ -2.31
PHGDHO43175 TRDV1-202ENST00000621643 102 ntBASIC0.59□□□□□ -2.31
PHGDHO43175 AC067863.3-201ENST00000624172 122 ntBASIC0.59□□□□□ -2.31
PHGDHO43175 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
PHGDHO43175 Y_RNA.190-201ENST00000363964 101 ntBASIC0.58□□□□□ -2.32
PHGDHO43175 MIR518A1-201ENST00000385068 85 ntBASIC0.58□□□□□ -2.32
PHGDHO43175 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
PHGDHO43175 RNU6-972P-201ENST00000391208 107 ntBASIC0.58□□□□□ -2.32
PHGDHO43175 RNU6-1265P-201ENST00000516342 103 ntBASIC0.58□□□□□ -2.32
PHGDHO43175 MIR3920-201ENST00000581751 86 ntBASIC0.58□□□□□ -2.32
PHGDHO43175 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
PHGDHO43175 MIR548L-201ENST00000408303 86 ntBASIC0.57□□□□□ -2.32
PHGDHO43175 RNA5SP89-201ENST00000410300 108 ntBASIC0.57□□□□□ -2.32
PHGDHO43175 AC069271.1-201ENST00000445577 156 ntBASIC0.57□□□□□ -2.32
PHGDHO43175 RNU7-85P-201ENST00000458851 63 ntBASIC0.57□□□□□ -2.32
PHGDHO43175 RNU6-168P-201ENST00000516189 101 ntBASIC0.57□□□□□ -2.32
PHGDHO43175 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.57□□□□□ -2.32
PHGDHO43175 U6.100-201ENST00000636230 99 ntBASIC0.57□□□□□ -2.32
PHGDHO43175 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
PHGDHO43175 SNORD118-201ENST00000363593 134 ntBASIC0.56□□□□□ -2.32
PHGDHO43175 RNU6-640P-201ENST00000363693 105 ntBASIC0.56□□□□□ -2.32
PHGDHO43175 Y_RNA.283-201ENST00000364798 112 ntBASIC0.56□□□□□ -2.32
PHGDHO43175 Y_RNA.290-201ENST00000364879 114 ntBASIC0.56□□□□□ -2.32
PHGDHO43175 RNU6-905P-201ENST00000384434 107 ntBASIC0.56□□□□□ -2.32
PHGDHO43175 Y_RNA.648-201ENST00000459455 110 ntBASIC0.56□□□□□ -2.32
PHGDHO43175 SNORA40.13-201ENST00000516379 120 ntBASIC0.56□□□□□ -2.32
PHGDHO43175 MIR4714-201ENST00000580728 77 ntBASIC0.56□□□□□ -2.32
PHGDHO43175 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.55□□□□□ -2.32
PHGDHO43175 snoU13.18-201ENST00000459483 104 ntBASIC0.55□□□□□ -2.32
PHGDHO43175 RNU6-75P-201ENST00000515944 104 ntBASIC0.55□□□□□ -2.32
PHGDHO43175 RNU7-13P-201ENST00000516413 62 ntBASIC0.55□□□□□ -2.32
PHGDHO43175 RNU6-158P-201ENST00000517104 100 ntBASIC0.55□□□□□ -2.32
PHGDHO43175 MIR4752-201ENST00000579672 72 ntBASIC0.55□□□□□ -2.32
PHGDHO43175 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
PHGDHO43175 RNU6-466P-201ENST00000391224 103 ntBASIC0.54□□□□□ -2.32
PHGDHO43175 SNORA68.3-201ENST00000515906 83 ntBASIC0.54□□□□□ -2.32
PHGDHO43175 Y_RNA.677-201ENST00000516401 85 ntBASIC0.54□□□□□ -2.32
PHGDHO43175 MIR548AG2-201ENST00000581228 64 ntBASIC0.54□□□□□ -2.32
PHGDHO43175 MIR488-201ENST00000365739 83 ntBASIC0.53□□□□□ -2.32
PHGDHO43175 Y_RNA.508-201ENST00000384502 114 ntBASIC0.53□□□□□ -2.32
PHGDHO43175 SNORD41.1-201ENST00000391000 69 ntBASIC0.53□□□□□ -2.32
PHGDHO43175 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
PHGDHO43175 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms