Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 RNA5SP268-201ENST00000516828 124 ntBASIC0.45□□□□□ -2.34
LSM4Q9Y4Z0 RNA5SP330-201ENST00000517096 96 ntBASIC0.45□□□□□ -2.34
LSM4Q9Y4Z0 AC244669.1-204ENST00000621564 178 ntBASIC0.45□□□□□ -2.34
LSM4Q9Y4Z0 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
LSM4Q9Y4Z0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.45□□□□□ -2.34
LSM4Q9Y4Z0 AL162726.3-218ENST00000636401 95 ntBASIC0.45□□□□□ -2.34
LSM4Q9Y4Z0 Y_RNA.115-201ENST00000363272 98 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 Y_RNA.155-201ENST00000363632 101 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 Y_RNA.258-201ENST00000364613 105 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 RNU6-816P-201ENST00000390914 107 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 RNU6-1268P-201ENST00000391214 107 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 RNU6-1239P-201ENST00000391310 107 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 SNRPGP12-201ENST00000449481 213 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 TRAJ51-201ENST00000504127 63 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 AC007012.1-201ENST00000567192 175 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 AC091304.10-201ENST00000641554 121 ntBASIC0.44□□□□□ -2.34
LSM4Q9Y4Z0 Y_RNA.49-201ENST00000362714 112 ntBASIC0.43□□□□□ -2.34
LSM4Q9Y4Z0 MIR519A1-201ENST00000385257 85 ntBASIC0.43□□□□□ -2.34
LSM4Q9Y4Z0 SUMO1P3-201ENST00000439961 304 ntBASIC0.43□□□□□ -2.34
LSM4Q9Y4Z0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
LSM4Q9Y4Z0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.43□□□□□ -2.34
LSM4Q9Y4Z0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 MIR330-201ENST00000362196 94 ntBASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 RNU6-170P-201ENST00000362832 104 ntBASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 SNORD44.1-201ENST00000363202 61 ntBASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 SNORD115-24-201ENST00000363528 82 ntBASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 Y_RNA.563-201ENST00000384707 108 ntBASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 AL353813.1-201ENST00000440700 253 ntBASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 RNU6-1006P-201ENST00000516998 103 ntBASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 MIR8087-201ENST00000612745 78 ntBASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
LSM4Q9Y4Z0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 SNORD38.1-201ENST00000363863 68 ntBASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 Y_RNA.309-201ENST00000365046 111 ntBASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 MIR548A3-201ENST00000385297 97 ntBASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 RNU6-1333P-201ENST00000516162 93 ntBASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 RNA5SP227-201ENST00000516184 113 ntBASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 RNU6-850P-201ENST00000516934 103 ntBASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 MTND5P40-201ENST00000559945 246 ntBASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 SNORA25.18-201ENST00000607153 114 ntBASIC0.41□□□□□ -2.34
LSM4Q9Y4Z0 Y_RNA.342-201ENST00000365352 113 ntBASIC0.4□□□□□ -2.35
LSM4Q9Y4Z0 SNORD63B-201ENST00000411005 70 ntBASIC0.4□□□□□ -2.35
LSM4Q9Y4Z0 AC008267.6-201ENST00000441664 139 ntBASIC0.4□□□□□ -2.35
LSM4Q9Y4Z0 AC097635.1-201ENST00000450678 155 ntBASIC0.4□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-863P-201ENST00000515989 104 ntBASIC0.4□□□□□ -2.35
LSM4Q9Y4Z0 SNORD33.1-201ENST00000516213 88 ntBASIC0.4□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-90P-201ENST00000606352 106 ntBASIC0.4□□□□□ -2.35
LSM4Q9Y4Z0 AL109933.3-201ENST00000619095 188 ntBASIC0.4□□□□□ -2.35
LSM4Q9Y4Z0 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
LSM4Q9Y4Z0 Y_RNA.35-201ENST00000362601 101 ntBASIC0.39□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-1099P-201ENST00000363533 107 ntBASIC0.39□□□□□ -2.35
LSM4Q9Y4Z0 Y_RNA.353-201ENST00000365440 108 ntBASIC0.39□□□□□ -2.35
LSM4Q9Y4Z0 MIR599-201ENST00000385069 95 ntBASIC0.39□□□□□ -2.35
LSM4Q9Y4Z0 RNU2-59P-201ENST00000410482 191 ntBASIC0.39□□□□□ -2.35
LSM4Q9Y4Z0 AL670379.3-201ENST00000605040 251 ntBASIC0.39□□□□□ -2.35
LSM4Q9Y4Z0 MIR7107-201ENST00000611489 80 ntBASIC0.39□□□□□ -2.35
LSM4Q9Y4Z0 RNA5SP403-201ENST00000363598 108 ntBASIC0.38□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-1201P-201ENST00000384227 107 ntBASIC0.38□□□□□ -2.35
LSM4Q9Y4Z0 MIR548A1-201ENST00000385041 97 ntBASIC0.38□□□□□ -2.35
LSM4Q9Y4Z0 AL603908.1-201ENST00000406098 201 ntBASIC0.38□□□□□ -2.35
LSM4Q9Y4Z0 MIR548G-201ENST00000408442 89 ntBASIC0.38□□□□□ -2.35
LSM4Q9Y4Z0 Y_RNA.809-201ENST00000516058 95 ntBASIC0.38□□□□□ -2.35
LSM4Q9Y4Z0 RNU7-161P-201ENST00000517289 62 ntBASIC0.38□□□□□ -2.35
LSM4Q9Y4Z0 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
LSM4Q9Y4Z0 AL442128.1-201ENST00000615151 90 ntBASIC0.38□□□□□ -2.35
LSM4Q9Y4Z0 AL035470.1-201ENST00000622571 220 ntBASIC0.38□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-1260P-201ENST00000362944 107 ntBASIC0.37□□□□□ -2.35
LSM4Q9Y4Z0 Y_RNA.549-201ENST00000384657 102 ntBASIC0.37□□□□□ -2.35
LSM4Q9Y4Z0 SPINT5P-201ENST00000448174 155 ntBASIC0.37□□□□□ -2.35
LSM4Q9Y4Z0 RNU7-106P-201ENST00000459514 67 ntBASIC0.37□□□□□ -2.35
LSM4Q9Y4Z0 AC068339.1-201ENST00000526965 141 ntBASIC0.37□□□□□ -2.35
LSM4Q9Y4Z0 MIR3910-1-201ENST00000580936 111 ntBASIC0.37□□□□□ -2.35
LSM4Q9Y4Z0 Y_RNA.221-201ENST00000364248 96 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 Y_RNA.247-201ENST00000364500 92 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-726P-201ENST00000364680 107 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-716P-201ENST00000365621 103 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 Y_RNA.377-201ENST00000365644 108 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 MIR1197-201ENST00000408818 88 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 RNU7-195P-201ENST00000458793 62 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 Y_RNA.681-201ENST00000516445 113 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 AC067863.3-201ENST00000624172 122 ntBASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.36□□□□□ -2.35
LSM4Q9Y4Z0 Y_RNA.173-201ENST00000363776 113 ntBASIC0.35□□□□□ -2.35
LSM4Q9Y4Z0 Y_RNA.261-201ENST00000364631 102 ntBASIC0.35□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.35□□□□□ -2.35
LSM4Q9Y4Z0 AC069271.1-201ENST00000445577 156 ntBASIC0.35□□□□□ -2.35
LSM4Q9Y4Z0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.35□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-848P-201ENST00000515948 107 ntBASIC0.35□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-617P-201ENST00000516147 107 ntBASIC0.35□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-473P-201ENST00000516164 107 ntBASIC0.35□□□□□ -2.35
LSM4Q9Y4Z0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.35□□□□□ -2.35
LSM4Q9Y4Z0 AL365222.1-201ENST00000614661 98 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms