Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 RNU6-519P-201ENST00000410590 108 ntBASIC1.48□□□□□ -2.17
SIT1Q9Y3P8 SNORD83.1-201ENST00000411362 77 ntBASIC1.48□□□□□ -2.17
SIT1Q9Y3P8 RPS26P5-201ENST00000418544 335 ntBASIC1.48□□□□□ -2.17
SIT1Q9Y3P8 SNORD4B-201ENST00000459083 72 ntBASIC1.48□□□□□ -2.17
SIT1Q9Y3P8 MIR4666B-201ENST00000578142 81 ntBASIC1.48□□□□□ -2.17
SIT1Q9Y3P8 RNU7-10P-201ENST00000607194 63 ntBASIC1.48□□□□□ -2.17
SIT1Q9Y3P8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SIT1Q9Y3P8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 Y_RNA.42-201ENST00000362660 108 ntBASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 RNU6-403P-201ENST00000363163 104 ntBASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 SNORD114-26-201ENST00000363543 72 ntBASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 SNORD48-201ENST00000364953 64 ntBASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 RNU6-910P-201ENST00000390844 107 ntBASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 AC022709.1-201ENST00000615967 87 ntBASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 MIR6515-201ENST00000619843 57 ntBASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
SIT1Q9Y3P8 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
SIT1Q9Y3P8 Y_RNA.56-201ENST00000362798 112 ntBASIC1.46□□□□□ -2.18
SIT1Q9Y3P8 SNORA72.6-201ENST00000384520 129 ntBASIC1.46□□□□□ -2.18
SIT1Q9Y3P8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.46□□□□□ -2.18
SIT1Q9Y3P8 SNORD100-201ENST00000408573 76 ntBASIC1.46□□□□□ -2.18
SIT1Q9Y3P8 RNA5SP395-201ENST00000516567 118 ntBASIC1.46□□□□□ -2.18
SIT1Q9Y3P8 MIR548H5-201ENST00000580314 60 ntBASIC1.46□□□□□ -2.18
SIT1Q9Y3P8 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
SIT1Q9Y3P8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 MIR96-201ENST00000362288 78 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 Y_RNA.13-201ENST00000362403 112 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 RNU6-228P-201ENST00000362700 106 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 MIR516A2-201ENST00000384888 90 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 MIR516A1-201ENST00000385033 90 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 MIR519C-201ENST00000385053 87 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 Y_RNA.607-201ENST00000410597 98 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 Y_RNA.611-201ENST00000410682 108 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 RNU7-85P-201ENST00000458851 63 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 MIR4771-2-201ENST00000577758 74 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 MIR4771-1-201ENST00000582617 74 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 SNORD92-201ENST00000585078 85 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 AC013244.2-201ENST00000603396 103 ntBASIC1.45□□□□□ -2.18
SIT1Q9Y3P8 MIR101-2-201ENST00000362195 79 ntBASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 RNU6-369P-201ENST00000362515 102 ntBASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 SNORD115-27-201ENST00000364430 82 ntBASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 RNU6-787P-201ENST00000384032 107 ntBASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 MIR635-201ENST00000384830 98 ntBASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 RNU6-243P-201ENST00000391140 107 ntBASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 SNORD63B-201ENST00000411005 70 ntBASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 AC023790.1-201ENST00000482174 347 ntBASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 RNU7-40P-201ENST00000516397 64 ntBASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 SNORA70.22-201ENST00000517160 124 ntBASIC1.44□□□□□ -2.18
SIT1Q9Y3P8 RNU6-1124P-201ENST00000384169 107 ntBASIC1.43□□□□□ -2.18
SIT1Q9Y3P8 Y_RNA.536-201ENST00000384621 113 ntBASIC1.43□□□□□ -2.18
SIT1Q9Y3P8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.43□□□□□ -2.18
SIT1Q9Y3P8 RNU7-106P-201ENST00000459514 67 ntBASIC1.43□□□□□ -2.18
SIT1Q9Y3P8 RNU6-638P-201ENST00000516582 104 ntBASIC1.43□□□□□ -2.18
SIT1Q9Y3P8 AC023827.1-201ENST00000569247 97 ntBASIC1.43□□□□□ -2.18
SIT1Q9Y3P8 MIR4676-201ENST00000583078 72 ntBASIC1.43□□□□□ -2.18
SIT1Q9Y3P8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SIT1Q9Y3P8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SIT1Q9Y3P8 MIR1236-201ENST00000408340 102 ntBASIC1.42□□□□□ -2.18
SIT1Q9Y3P8 AC093729.1-201ENST00000513074 128 ntBASIC1.42□□□□□ -2.18
SIT1Q9Y3P8 RNU7-156P-201ENST00000517214 74 ntBASIC1.42□□□□□ -2.18
SIT1Q9Y3P8 RNU1-93P-201ENST00000364704 169 ntBASIC1.41□□□□□ -2.18
SIT1Q9Y3P8 MIR938-201ENST00000401216 83 ntBASIC1.41□□□□□ -2.18
SIT1Q9Y3P8 TRAJ51-201ENST00000504127 63 ntBASIC1.41□□□□□ -2.18
SIT1Q9Y3P8 MIR6779-201ENST00000617283 64 ntBASIC1.41□□□□□ -2.18
SIT1Q9Y3P8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SIT1Q9Y3P8 RNU6-1260P-201ENST00000362944 107 ntBASIC1.4□□□□□ -2.19
SIT1Q9Y3P8 RNA5SP325-201ENST00000363756 130 ntBASIC1.4□□□□□ -2.19
SIT1Q9Y3P8 Y_RNA.283-201ENST00000364798 112 ntBASIC1.4□□□□□ -2.19
SIT1Q9Y3P8 RNU6-524P-201ENST00000384270 107 ntBASIC1.4□□□□□ -2.19
SIT1Q9Y3P8 AC092628.1-201ENST00000436250 252 ntBASIC1.4□□□□□ -2.19
SIT1Q9Y3P8 snoU13.11-201ENST00000459219 104 ntBASIC1.4□□□□□ -2.19
SIT1Q9Y3P8 MIR3122-201ENST00000577243 73 ntBASIC1.4□□□□□ -2.19
SIT1Q9Y3P8 MIR4804-201ENST00000581683 73 ntBASIC1.4□□□□□ -2.19
SIT1Q9Y3P8 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
SIT1Q9Y3P8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SIT1Q9Y3P8 MIR520E-201ENST00000384867 87 ntBASIC1.39□□□□□ -2.19
SIT1Q9Y3P8 RNU6-75P-201ENST00000515944 104 ntBASIC1.39□□□□□ -2.19
SIT1Q9Y3P8 RNU6-448P-201ENST00000517052 107 ntBASIC1.39□□□□□ -2.19
SIT1Q9Y3P8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.39□□□□□ -2.19
SIT1Q9Y3P8 AC140658.3-201ENST00000567603 271 ntBASIC1.39□□□□□ -2.19
SIT1Q9Y3P8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.39□□□□□ -2.19
SIT1Q9Y3P8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 SNORD115-37-201ENST00000363768 82 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 RNU6-364P-201ENST00000384387 107 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 RNU6-466P-201ENST00000391224 103 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 RNU6-279P-201ENST00000391297 101 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 MIR1255A-201ENST00000408338 113 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 RNU6-994P-201ENST00000410507 111 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 AC015818.7-201ENST00000428754 109 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 AC097635.1-201ENST00000450678 155 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 RNU7-56P-201ENST00000458744 62 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 RPS29P1-201ENST00000465274 159 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 RNU6-1223P-201ENST00000517124 104 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 AC138907.6-201ENST00000568401 126 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 AC138869.1-201ENST00000568623 124 ntBASIC1.38□□□□□ -2.19
SIT1Q9Y3P8 MIR4536-1-201ENST00000583537 88 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms