Protein–RNA interactions for Protein: Q9Y2K2

SIK3, Serine/threonine-protein kinase SIK3, humanhuman

Predictions only

Length 1,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3Q9Y2K2 RNU6-86P-201ENST00000606534 107 ntBASIC1.11□□□□□ -2.23
SIK3Q9Y2K2 RMST_2.1-201ENST00000617263 136 ntBASIC1.11□□□□□ -2.23
SIK3Q9Y2K2 Y_RNA.56-201ENST00000362798 112 ntBASIC1.1□□□□□ -2.23
SIK3Q9Y2K2 Y_RNA.342-201ENST00000365352 113 ntBASIC1.1□□□□□ -2.23
SIK3Q9Y2K2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.1□□□□□ -2.23
SIK3Q9Y2K2 Y_RNA.697-201ENST00000516776 113 ntBASIC1.1□□□□□ -2.23
SIK3Q9Y2K2 MALAT1.1-201ENST00000618249 95 ntBASIC1.1□□□□□ -2.23
SIK3Q9Y2K2 SNORD114-27-201ENST00000363766 70 ntBASIC1.09□□□□□ -2.23
SIK3Q9Y2K2 Y_RNA.220-201ENST00000364244 109 ntBASIC1.09□□□□□ -2.23
SIK3Q9Y2K2 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
SIK3Q9Y2K2 SNORD105-201ENST00000386910 85 ntBASIC1.09□□□□□ -2.23
SIK3Q9Y2K2 SNORD100-201ENST00000408573 76 ntBASIC1.09□□□□□ -2.23
SIK3Q9Y2K2 RNA5SP102-201ENST00000516865 106 ntBASIC1.09□□□□□ -2.23
SIK3Q9Y2K2 MIR4661-201ENST00000582720 75 ntBASIC1.09□□□□□ -2.23
SIK3Q9Y2K2 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
SIK3Q9Y2K2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.09□□□□□ -2.23
SIK3Q9Y2K2 Y_RNA.57-201ENST00000362806 113 ntBASIC1.08□□□□□ -2.24
SIK3Q9Y2K2 SNORD116-10-201ENST00000363791 102 ntBASIC1.08□□□□□ -2.24
SIK3Q9Y2K2 RNY4P30-201ENST00000410216 95 ntBASIC1.08□□□□□ -2.24
SIK3Q9Y2K2 RNA5SP255-201ENST00000516370 107 ntBASIC1.08□□□□□ -2.24
SIK3Q9Y2K2 AC103810.7-201ENST00000607821 91 ntBASIC1.08□□□□□ -2.24
SIK3Q9Y2K2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.08□□□□□ -2.24
SIK3Q9Y2K2 U7.3-201ENST00000616123 62 ntBASIC1.08□□□□□ -2.24
SIK3Q9Y2K2 Y_RNA.43-201ENST00000362670 111 ntBASIC1.07□□□□□ -2.24
SIK3Q9Y2K2 Y_RNA.536-201ENST00000384621 113 ntBASIC1.07□□□□□ -2.24
SIK3Q9Y2K2 MIR635-201ENST00000384830 98 ntBASIC1.07□□□□□ -2.24
SIK3Q9Y2K2 MIR1276-201ENST00000408707 83 ntBASIC1.07□□□□□ -2.24
SIK3Q9Y2K2 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
SIK3Q9Y2K2 RNU6-448P-201ENST00000517052 107 ntBASIC1.07□□□□□ -2.24
SIK3Q9Y2K2 AC008608.1-201ENST00000603910 127 ntBASIC1.07□□□□□ -2.24
SIK3Q9Y2K2 MIR6504-201ENST00000613520 61 ntBASIC1.07□□□□□ -2.24
SIK3Q9Y2K2 MIR96-201ENST00000362288 78 ntBASIC1.06□□□□□ -2.24
SIK3Q9Y2K2 MIR488-201ENST00000365739 83 ntBASIC1.06□□□□□ -2.24
SIK3Q9Y2K2 MIR520H-201ENST00000385126 88 ntBASIC1.06□□□□□ -2.24
SIK3Q9Y2K2 MIR519A1-201ENST00000385257 85 ntBASIC1.06□□□□□ -2.24
SIK3Q9Y2K2 Y_RNA.290-201ENST00000364879 114 ntBASIC1.05□□□□□ -2.24
SIK3Q9Y2K2 Y_RNA.369-201ENST00000365568 117 ntBASIC1.05□□□□□ -2.24
SIK3Q9Y2K2 SNORD58A-201ENST00000383875 65 ntBASIC1.05□□□□□ -2.24
SIK3Q9Y2K2 RNU6-535P-201ENST00000384722 107 ntBASIC1.05□□□□□ -2.24
SIK3Q9Y2K2 MIR181B2-201ENST00000385004 89 ntBASIC1.05□□□□□ -2.24
SIK3Q9Y2K2 MIR5582-201ENST00000579697 68 ntBASIC1.05□□□□□ -2.24
SIK3Q9Y2K2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.05□□□□□ -2.24
SIK3Q9Y2K2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.05□□□□□ -2.24
SIK3Q9Y2K2 RNU6-1131P-201ENST00000364955 107 ntBASIC1.04□□□□□ -2.24
SIK3Q9Y2K2 RNU6-291P-201ENST00000384720 107 ntBASIC1.04□□□□□ -2.24
SIK3Q9Y2K2 RNU6-1254P-201ENST00000391266 104 ntBASIC1.04□□□□□ -2.24
SIK3Q9Y2K2 SNORD63B-201ENST00000411005 70 ntBASIC1.04□□□□□ -2.24
SIK3Q9Y2K2 AC092628.1-201ENST00000436250 252 ntBASIC1.04□□□□□ -2.24
SIK3Q9Y2K2 AC138907.6-201ENST00000568401 126 ntBASIC1.04□□□□□ -2.24
SIK3Q9Y2K2 AC138869.1-201ENST00000568623 124 ntBASIC1.04□□□□□ -2.24
SIK3Q9Y2K2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.03□□□□□ -2.24
SIK3Q9Y2K2 Y_RNA.191-201ENST00000363972 113 ntBASIC1.03□□□□□ -2.24
SIK3Q9Y2K2 AL513043.2-201ENST00000573941 143 ntBASIC1.03□□□□□ -2.24
SIK3Q9Y2K2 RNU6-1255P-201ENST00000363434 112 ntBASIC1.02□□□□□ -2.25
SIK3Q9Y2K2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SIK3Q9Y2K2 AC097635.1-201ENST00000450678 155 ntBASIC1.02□□□□□ -2.25
SIK3Q9Y2K2 TRAJ51-201ENST00000504127 63 ntBASIC1.02□□□□□ -2.25
SIK3Q9Y2K2 RNU6-162P-201ENST00000516228 103 ntBASIC1.02□□□□□ -2.25
SIK3Q9Y2K2 AC025521.1-201ENST00000621624 286 ntBASIC1.02□□□□□ -2.25
SIK3Q9Y2K2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
SIK3Q9Y2K2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.01□□□□□ -2.25
SIK3Q9Y2K2 RNA5SP117-201ENST00000365294 118 ntBASIC1.01□□□□□ -2.25
SIK3Q9Y2K2 MIR516A2-201ENST00000384888 90 ntBASIC1.01□□□□□ -2.25
SIK3Q9Y2K2 MIR516A1-201ENST00000385033 90 ntBASIC1.01□□□□□ -2.25
SIK3Q9Y2K2 MIR518E-201ENST00000385252 88 ntBASIC1.01□□□□□ -2.25
SIK3Q9Y2K2 RNU6-243P-201ENST00000391140 107 ntBASIC1.01□□□□□ -2.25
SIK3Q9Y2K2 SNORD114-22-201ENST00000365423 72 ntBASIC1□□□□□ -2.25
SIK3Q9Y2K2 RNU6-49P-201ENST00000384256 107 ntBASIC1□□□□□ -2.25
SIK3Q9Y2K2 AC002350.1-201ENST00000490759 375 ntBASIC1□□□□□ -2.25
SIK3Q9Y2K2 RNU6-844P-201ENST00000517175 102 ntBASIC1□□□□□ -2.25
SIK3Q9Y2K2 MIR4452-201ENST00000583004 71 ntBASIC1□□□□□ -2.25
SIK3Q9Y2K2 SNORD36A-201ENST00000362874 73 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 RNU6-1260P-201ENST00000362944 107 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 MIR573-201ENST00000384964 99 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 Y_RNA.648-201ENST00000459455 110 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 RNU7-106P-201ENST00000459514 67 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 Y_RNA.809-201ENST00000516058 95 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 RNU6-135P-201ENST00000516769 101 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 uc_338.16-201ENST00000621804 95 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
SIK3Q9Y2K2 Y_RNA.32-201ENST00000362589 110 ntBASIC0.98□□□□□ -2.25
SIK3Q9Y2K2 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
SIK3Q9Y2K2 RNY1P7-201ENST00000384743 110 ntBASIC0.98□□□□□ -2.25
SIK3Q9Y2K2 AC244505.6-201ENST00000452829 130 ntBASIC0.98□□□□□ -2.25
SIK3Q9Y2K2 RNU7-195P-201ENST00000458793 62 ntBASIC0.98□□□□□ -2.25
SIK3Q9Y2K2 AC006254.2-201ENST00000603259 279 ntBASIC0.98□□□□□ -2.25
SIK3Q9Y2K2 RNU1-93P-201ENST00000364704 169 ntBASIC0.97□□□□□ -2.25
SIK3Q9Y2K2 RNU6-294P-201ENST00000364999 102 ntBASIC0.97□□□□□ -2.25
SIK3Q9Y2K2 SNORD99-201ENST00000408612 74 ntBASIC0.97□□□□□ -2.25
SIK3Q9Y2K2 SNORA31.14-201ENST00000516728 116 ntBASIC0.97□□□□□ -2.25
SIK3Q9Y2K2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.25
SIK3Q9Y2K2 Y_RNA.190-201ENST00000363964 101 ntBASIC0.96□□□□□ -2.26
SIK3Q9Y2K2 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
SIK3Q9Y2K2 MIR599-201ENST00000385069 95 ntBASIC0.96□□□□□ -2.26
SIK3Q9Y2K2 RNU6-466P-201ENST00000391224 103 ntBASIC0.96□□□□□ -2.26
SIK3Q9Y2K2 RNU6-469P-201ENST00000516253 101 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms