Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MTND5P40-201ENST00000559945 246 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 MIR4694-201ENST00000578534 80 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 uc_338.28-201ENST00000612082 187 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 Y_RNA.36-201ENST00000362602 112 ntBASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 RNY3P2-201ENST00000362918 102 ntBASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 SNORD114-26-201ENST00000363543 72 ntBASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 SNORD38.1-201ENST00000363863 68 ntBASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 RNU6-106P-201ENST00000384405 107 ntBASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 uc_338.16-201ENST00000621804 95 ntBASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
SMARCAL1Q9NZC9 MIR18A-201ENST00000362310 71 ntBASIC0.69□□□□□ -2.3
SMARCAL1Q9NZC9 SNORA63.4-201ENST00000362763 126 ntBASIC0.69□□□□□ -2.3
SMARCAL1Q9NZC9 Y_RNA.163-201ENST00000363702 113 ntBASIC0.69□□□□□ -2.3
SMARCAL1Q9NZC9 RNY1P8-201ENST00000383970 114 ntBASIC0.69□□□□□ -2.3
SMARCAL1Q9NZC9 SNORD38.2-201ENST00000384470 69 ntBASIC0.69□□□□□ -2.3
SMARCAL1Q9NZC9 MIR644A-201ENST00000385262 94 ntBASIC0.69□□□□□ -2.3
SMARCAL1Q9NZC9 MIR548G-201ENST00000408442 89 ntBASIC0.69□□□□□ -2.3
SMARCAL1Q9NZC9 RNU6-554P-201ENST00000410466 106 ntBASIC0.69□□□□□ -2.3
SMARCAL1Q9NZC9 AC141557.1-201ENST00000540982 400 ntBASIC0.69□□□□□ -2.3
SMARCAL1Q9NZC9 RNU6-90P-201ENST00000606352 106 ntBASIC0.69□□□□□ -2.3
SMARCAL1Q9NZC9 Y_RNA.56-201ENST00000362798 112 ntBASIC0.68□□□□□ -2.3
SMARCAL1Q9NZC9 Y_RNA.377-201ENST00000365644 108 ntBASIC0.68□□□□□ -2.3
SMARCAL1Q9NZC9 TRAJ51-201ENST00000504127 63 ntBASIC0.68□□□□□ -2.3
SMARCAL1Q9NZC9 RNU6-919P-201ENST00000516731 104 ntBASIC0.68□□□□□ -2.3
SMARCAL1Q9NZC9 RNU6-850P-201ENST00000516934 103 ntBASIC0.68□□□□□ -2.3
SMARCAL1Q9NZC9 RNU6-44P-201ENST00000384045 107 ntBASIC0.67□□□□□ -2.3
SMARCAL1Q9NZC9 MIR635-201ENST00000384830 98 ntBASIC0.67□□□□□ -2.3
SMARCAL1Q9NZC9 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
SMARCAL1Q9NZC9 AC092628.1-201ENST00000436250 252 ntBASIC0.67□□□□□ -2.3
SMARCAL1Q9NZC9 SNRPGP12-201ENST00000449481 213 ntBASIC0.67□□□□□ -2.3
SMARCAL1Q9NZC9 Y_RNA.659-201ENST00000515994 113 ntBASIC0.67□□□□□ -2.3
SMARCAL1Q9NZC9 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
SMARCAL1Q9NZC9 AC091304.10-201ENST00000641554 121 ntBASIC0.67□□□□□ -2.3
SMARCAL1Q9NZC9 SNORA36.2-201ENST00000384004 127 ntBASIC0.66□□□□□ -2.3
SMARCAL1Q9NZC9 MIR1302-5-201ENST00000408164 150 ntBASIC0.66□□□□□ -2.3
SMARCAL1Q9NZC9 AL035461.1-201ENST00000421490 332 ntBASIC0.66□□□□□ -2.3
SMARCAL1Q9NZC9 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
SMARCAL1Q9NZC9 MIR3678-201ENST00000578455 94 ntBASIC0.66□□□□□ -2.3
SMARCAL1Q9NZC9 MIR548H5-201ENST00000580314 60 ntBASIC0.66□□□□□ -2.3
SMARCAL1Q9NZC9 AC096720.1-201ENST00000604441 183 ntBASIC0.66□□□□□ -2.3
SMARCAL1Q9NZC9 RNU6-1163P-201ENST00000364516 107 ntBASIC0.65□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-571P-201ENST00000384128 107 ntBASIC0.65□□□□□ -2.31
SMARCAL1Q9NZC9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SMARCAL1Q9NZC9 SNORD63B-201ENST00000411005 70 ntBASIC0.65□□□□□ -2.31
SMARCAL1Q9NZC9 AC109327.2-201ENST00000448339 378 ntBASIC0.65□□□□□ -2.31
SMARCAL1Q9NZC9 RNU7-106P-201ENST00000459514 67 ntBASIC0.65□□□□□ -2.31
SMARCAL1Q9NZC9 MIR450A1-201ENST00000362262 91 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-170P-201ENST00000362832 104 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.173-201ENST00000363776 113 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 RNU4-36P-201ENST00000364294 144 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.342-201ENST00000365352 113 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 SNORA51.5-201ENST00000384126 131 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 MIR590-201ENST00000385008 97 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-904P-201ENST00000516206 101 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-795P-201ENST00000516323 103 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 MIR548Z-201ENST00000584743 97 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-86P-201ENST00000606534 107 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 MIR6779-201ENST00000617283 64 ntBASIC0.64□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-756P-201ENST00000383997 107 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.567-201ENST00000384736 106 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 MIR516A2-201ENST00000384888 90 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 MIR516A1-201ENST00000385033 90 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 MIR216A-201ENST00000385063 110 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.601-201ENST00000410500 113 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 RNU7-195P-201ENST00000458793 62 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-469P-201ENST00000516253 101 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-109P-201ENST00000516364 107 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-184P-201ENST00000516514 107 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 AC138869.1-201ENST00000568623 124 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 RNU7-10P-201ENST00000607194 63 ntBASIC0.63□□□□□ -2.31
SMARCAL1Q9NZC9 SNORD18A-201ENST00000363753 72 ntBASIC0.62□□□□□ -2.31
SMARCAL1Q9NZC9 RN7SL793P-201ENST00000583259 296 ntBASIC0.62□□□□□ -2.31
SMARCAL1Q9NZC9 AC012531.4-201ENST00000616509 177 ntBASIC0.62□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.57-201ENST00000362806 113 ntBASIC0.61□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.78-201ENST00000362970 110 ntBASIC0.61□□□□□ -2.31
SMARCAL1Q9NZC9 SNORD45B-201ENST00000364617 72 ntBASIC0.61□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.467-201ENST00000384297 102 ntBASIC0.61□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
SMARCAL1Q9NZC9 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
SMARCAL1Q9NZC9 AL031737.1-201ENST00000450125 223 ntBASIC0.61□□□□□ -2.31
SMARCAL1Q9NZC9 AL157398.1-201ENST00000452981 186 ntBASIC0.61□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-537P-201ENST00000517277 103 ntBASIC0.61□□□□□ -2.31
SMARCAL1Q9NZC9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.10-201ENST00000362371 110 ntBASIC0.6□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.95-201ENST00000363079 95 ntBASIC0.6□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.221-201ENST00000364248 96 ntBASIC0.6□□□□□ -2.31
SMARCAL1Q9NZC9 RNU6-755P-201ENST00000364400 103 ntBASIC0.6□□□□□ -2.31
SMARCAL1Q9NZC9 MIR599-201ENST00000385069 95 ntBASIC0.6□□□□□ -2.31
SMARCAL1Q9NZC9 Y_RNA.809-201ENST00000516058 95 ntBASIC0.6□□□□□ -2.31
SMARCAL1Q9NZC9 SCARNA23-201ENST00000516060 130 ntBASIC0.6□□□□□ -2.31
SMARCAL1Q9NZC9 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 272 ms