Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 RPS29P1-201ENST00000465274 159 ntBASIC0.61□□□□□ -2.31
Q9N2J8 MIR4639-201ENST00000584938 69 ntBASIC0.61□□□□□ -2.31
Q9N2J8 Y_RNA.247-201ENST00000364500 92 ntBASIC0.6□□□□□ -2.31
Q9N2J8 Y_RNA.342-201ENST00000365352 113 ntBASIC0.6□□□□□ -2.31
Q9N2J8 Y_RNA.567-201ENST00000384736 106 ntBASIC0.6□□□□□ -2.31
Q9N2J8 MIR518E-201ENST00000385252 88 ntBASIC0.6□□□□□ -2.31
Q9N2J8 Y_RNA.629-201ENST00000411368 105 ntBASIC0.6□□□□□ -2.31
Q9N2J8 AC097635.1-201ENST00000450678 155 ntBASIC0.6□□□□□ -2.31
Q9N2J8 TRAJ51-201ENST00000504127 63 ntBASIC0.6□□□□□ -2.31
Q9N2J8 AC092634.7-201ENST00000621022 103 ntBASIC0.6□□□□□ -2.31
Q9N2J8 RNU6-832P-201ENST00000363319 107 ntBASIC0.59□□□□□ -2.31
Q9N2J8 MIR519A1-201ENST00000385257 85 ntBASIC0.59□□□□□ -2.31
Q9N2J8 SNORD63B-201ENST00000411005 70 ntBASIC0.59□□□□□ -2.31
Q9N2J8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.59□□□□□ -2.31
Q9N2J8 AC141557.1-201ENST00000540982 400 ntBASIC0.59□□□□□ -2.31
Q9N2J8 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
Q9N2J8 AL078603.1-201ENST00000603824 313 ntBASIC0.59□□□□□ -2.31
Q9N2J8 SNORD28-201ENST00000384706 75 ntBASIC0.58□□□□□ -2.32
Q9N2J8 MIR599-201ENST00000385069 95 ntBASIC0.58□□□□□ -2.32
Q9N2J8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Q9N2J8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.58□□□□□ -2.32
Q9N2J8 RNA5SP220-201ENST00000516298 104 ntBASIC0.58□□□□□ -2.32
Q9N2J8 RNU6-589P-201ENST00000516485 107 ntBASIC0.58□□□□□ -2.32
Q9N2J8 MIR6788-201ENST00000618842 66 ntBASIC0.58□□□□□ -2.32
Q9N2J8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Q9N2J8 Y_RNA.10-201ENST00000362371 110 ntBASIC0.57□□□□□ -2.32
Q9N2J8 SNORD115-24-201ENST00000363528 82 ntBASIC0.57□□□□□ -2.32
Q9N2J8 RNU6-1099P-201ENST00000363533 107 ntBASIC0.57□□□□□ -2.32
Q9N2J8 Y_RNA.173-201ENST00000363776 113 ntBASIC0.57□□□□□ -2.32
Q9N2J8 RNU4-36P-201ENST00000364294 144 ntBASIC0.57□□□□□ -2.32
Q9N2J8 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
Q9N2J8 Y_RNA.659-201ENST00000515994 113 ntBASIC0.57□□□□□ -2.32
Q9N2J8 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
Q9N2J8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.57□□□□□ -2.32
Q9N2J8 RNA5SP517-201ENST00000364724 117 ntBASIC0.56□□□□□ -2.32
Q9N2J8 Y_RNA.291-201ENST00000364886 113 ntBASIC0.56□□□□□ -2.32
Q9N2J8 MIR1302-5-201ENST00000408164 150 ntBASIC0.56□□□□□ -2.32
Q9N2J8 Y_RNA.809-201ENST00000516058 95 ntBASIC0.56□□□□□ -2.32
Q9N2J8 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
Q9N2J8 RNA5SP47-201ENST00000517230 109 ntBASIC0.56□□□□□ -2.32
Q9N2J8 MIR151B-201ENST00000584249 96 ntBASIC0.56□□□□□ -2.32
Q9N2J8 AC244669.1-204ENST00000621564 178 ntBASIC0.56□□□□□ -2.32
Q9N2J8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Q9N2J8 Y_RNA.57-201ENST00000362806 113 ntBASIC0.55□□□□□ -2.32
Q9N2J8 RNU6-1290P-201ENST00000362957 109 ntBASIC0.55□□□□□ -2.32
Q9N2J8 Y_RNA.163-201ENST00000363702 113 ntBASIC0.55□□□□□ -2.32
Q9N2J8 SNORD45B-201ENST00000364617 72 ntBASIC0.55□□□□□ -2.32
Q9N2J8 RNU6-42P-201ENST00000384165 107 ntBASIC0.55□□□□□ -2.32
Q9N2J8 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
Q9N2J8 SNORD71-201ENST00000411292 86 ntBASIC0.55□□□□□ -2.32
Q9N2J8 RNU7-195P-201ENST00000458793 62 ntBASIC0.55□□□□□ -2.32
Q9N2J8 RN7SKP12-201ENST00000516275 143 ntBASIC0.55□□□□□ -2.32
Q9N2J8 Y_RNA.709-201ENST00000516952 92 ntBASIC0.55□□□□□ -2.32
Q9N2J8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.55□□□□□ -2.32
Q9N2J8 RNU6-1260P-201ENST00000362944 107 ntBASIC0.54□□□□□ -2.32
Q9N2J8 SNORA36.1-201ENST00000363424 132 ntBASIC0.54□□□□□ -2.32
Q9N2J8 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
Q9N2J8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.54□□□□□ -2.32
Q9N2J8 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
Q9N2J8 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
Q9N2J8 RNA5SP268-201ENST00000516828 124 ntBASIC0.54□□□□□ -2.32
Q9N2J8 MIR4714-201ENST00000580728 77 ntBASIC0.54□□□□□ -2.32
Q9N2J8 MIR4439-201ENST00000583746 80 ntBASIC0.54□□□□□ -2.32
Q9N2J8 MIR6828-201ENST00000636181 60 ntBASIC0.54□□□□□ -2.32
Q9N2J8 AC091304.10-201ENST00000641554 121 ntBASIC0.54□□□□□ -2.32
Q9N2J8 Y_RNA.78-201ENST00000362970 110 ntBASIC0.53□□□□□ -2.32
Q9N2J8 RNU6-1325P-201ENST00000364905 105 ntBASIC0.53□□□□□ -2.32
Q9N2J8 MIR516A2-201ENST00000384888 90 ntBASIC0.53□□□□□ -2.32
Q9N2J8 MIR516A1-201ENST00000385033 90 ntBASIC0.53□□□□□ -2.32
Q9N2J8 RNU6-1254P-201ENST00000391266 104 ntBASIC0.53□□□□□ -2.32
Q9N2J8 snoU13.18-201ENST00000459483 104 ntBASIC0.53□□□□□ -2.32
Q9N2J8 RNA5SP227-201ENST00000516184 113 ntBASIC0.53□□□□□ -2.32
Q9N2J8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.53□□□□□ -2.32
Q9N2J8 RNU6-1125P-201ENST00000363601 107 ntBASIC0.52□□□□□ -2.33
Q9N2J8 RNU6-1163P-201ENST00000364516 107 ntBASIC0.52□□□□□ -2.33
Q9N2J8 RNU6-480P-201ENST00000384332 107 ntBASIC0.52□□□□□ -2.33
Q9N2J8 Y_RNA.508-201ENST00000384502 114 ntBASIC0.52□□□□□ -2.33
Q9N2J8 RNU6-243P-201ENST00000391140 107 ntBASIC0.52□□□□□ -2.33
Q9N2J8 Y_RNA.601-201ENST00000410500 113 ntBASIC0.52□□□□□ -2.33
Q9N2J8 RNU7-106P-201ENST00000459514 67 ntBASIC0.52□□□□□ -2.33
Q9N2J8 MIR3613-201ENST00000579844 87 ntBASIC0.52□□□□□ -2.33
Q9N2J8 MIR6734-201ENST00000621166 68 ntBASIC0.52□□□□□ -2.33
Q9N2J8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.52□□□□□ -2.33
Q9N2J8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Q9N2J8 RNA5SP403-201ENST00000363598 108 ntBASIC0.51□□□□□ -2.33
Q9N2J8 Y_RNA.221-201ENST00000364248 96 ntBASIC0.51□□□□□ -2.33
Q9N2J8 RNU6-1113P-201ENST00000384348 107 ntBASIC0.51□□□□□ -2.33
Q9N2J8 MIR518A1-201ENST00000385068 85 ntBASIC0.51□□□□□ -2.33
Q9N2J8 RNU7-104P-201ENST00000459398 79 ntBASIC0.51□□□□□ -2.33
Q9N2J8 RNU7-161P-201ENST00000517289 62 ntBASIC0.51□□□□□ -2.33
Q9N2J8 MIR5000-201ENST00000577717 103 ntBASIC0.51□□□□□ -2.33
Q9N2J8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Q9N2J8 RNU6-106P-201ENST00000384405 107 ntBASIC0.5□□□□□ -2.33
Q9N2J8 MIR548L-201ENST00000408303 86 ntBASIC0.5□□□□□ -2.33
Q9N2J8 AC109327.2-201ENST00000448339 378 ntBASIC0.5□□□□□ -2.33
Q9N2J8 SNORA25.18-201ENST00000607153 114 ntBASIC0.5□□□□□ -2.33
Q9N2J8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
Q9N2J8 Y_RNA.95-201ENST00000363079 95 ntBASIC0.49□□□□□ -2.33
Q9N2J8 SNORD118-201ENST00000363593 134 ntBASIC0.49□□□□□ -2.33
Q9N2J8 RNU6-1244P-201ENST00000363614 108 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 238.4 ms