Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 Y_RNA.12-201ENST00000362393 112 ntBASIC1.9□□□□□ -2.11
RC3H2Q9HBD1 RNU6-649P-201ENST00000384463 107 ntBASIC1.9□□□□□ -2.11
RC3H2Q9HBD1 MIR30A-201ENST00000385092 71 ntBASIC1.9□□□□□ -2.11
RC3H2Q9HBD1 AL606490.4-201ENST00000423117 127 ntBASIC1.9□□□□□ -2.11
RC3H2Q9HBD1 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
RC3H2Q9HBD1 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.9□□□□□ -2.11
RC3H2Q9HBD1 RNU6-330P-201ENST00000363015 107 ntBASIC1.89□□□□□ -2.11
RC3H2Q9HBD1 RNU6-654P-201ENST00000364373 107 ntBASIC1.89□□□□□ -2.11
RC3H2Q9HBD1 SNORD115-31-201ENST00000365318 82 ntBASIC1.89□□□□□ -2.11
RC3H2Q9HBD1 RNU6-1241P-201ENST00000384536 107 ntBASIC1.89□□□□□ -2.11
RC3H2Q9HBD1 MIR1185-1-201ENST00000408598 86 ntBASIC1.89□□□□□ -2.11
RC3H2Q9HBD1 TRAJ51-201ENST00000504127 63 ntBASIC1.89□□□□□ -2.11
RC3H2Q9HBD1 MIR2115-201ENST00000516657 100 ntBASIC1.89□□□□□ -2.11
RC3H2Q9HBD1 AC103810.8-201ENST00000607347 118 ntBASIC1.89□□□□□ -2.11
RC3H2Q9HBD1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RC3H2Q9HBD1 MIR377-201ENST00000362145 69 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 RNU4-58P-201ENST00000363192 141 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 Y_RNA.205-201ENST00000364128 113 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 SNORD100-201ENST00000408573 76 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 RNA5SP95-201ENST00000410319 137 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 RNU11-2P-201ENST00000516898 142 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 AC015688.6-201ENST00000577737 104 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 YWHAEP2-201ENST00000580066 112 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 YWHAEP3-201ENST00000582767 121 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 MIR7111-201ENST00000619751 72 ntBASIC1.88□□□□□ -2.11
RC3H2Q9HBD1 Y_RNA.36-201ENST00000362602 112 ntBASIC1.87□□□□□ -2.11
RC3H2Q9HBD1 RNU7-195P-201ENST00000458793 62 ntBASIC1.87□□□□□ -2.11
RC3H2Q9HBD1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.87□□□□□ -2.11
RC3H2Q9HBD1 U6.111-201ENST00000636093 83 ntBASIC1.87□□□□□ -2.11
RC3H2Q9HBD1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
RC3H2Q9HBD1 RNU1-36P-201ENST00000365130 165 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 RNU6-1051P-201ENST00000365471 102 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 RNU6-154P-201ENST00000384306 106 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 RNU6-800P-201ENST00000384473 103 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 MIR519A1-201ENST00000385257 85 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 SNORD30.1-201ENST00000391309 70 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 MIR942-201ENST00000401111 86 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 RNU2-59P-201ENST00000410482 191 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 RNU7-95P-201ENST00000459222 64 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.86□□□□□ -2.11
RC3H2Q9HBD1 RNU6-580P-201ENST00000365159 107 ntBASIC1.85□□□□□ -2.11
RC3H2Q9HBD1 RNU6-53P-201ENST00000365367 106 ntBASIC1.85□□□□□ -2.11
RC3H2Q9HBD1 Y_RNA.536-201ENST00000384621 113 ntBASIC1.85□□□□□ -2.11
RC3H2Q9HBD1 SNORD93-201ENST00000408813 74 ntBASIC1.85□□□□□ -2.11
RC3H2Q9HBD1 MIR2113-201ENST00000459007 91 ntBASIC1.85□□□□□ -2.11
RC3H2Q9HBD1 TRDV1-202ENST00000621643 102 ntBASIC1.85□□□□□ -2.11
RC3H2Q9HBD1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.85□□□□□ -2.11
RC3H2Q9HBD1 ZNF209P-201ENST00000593450 2304 ntBASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 Y_RNA.42-201ENST00000362660 108 ntBASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 SNORD33-201ENST00000362761 85 ntBASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 Y_RNA.207-201ENST00000364142 106 ntBASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 TRMT112P2-201ENST00000512910 132 ntBASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 U6.100-201ENST00000636230 99 ntBASIC1.84□□□□□ -2.11
RC3H2Q9HBD1 MIR337-201ENST00000362281 93 ntBASIC1.83□□□□□ -2.12
RC3H2Q9HBD1 RNU6-403P-201ENST00000363163 104 ntBASIC1.83□□□□□ -2.12
RC3H2Q9HBD1 SNORA8.1-201ENST00000384250 140 ntBASIC1.83□□□□□ -2.12
RC3H2Q9HBD1 RNU6-291P-201ENST00000384720 107 ntBASIC1.83□□□□□ -2.12
RC3H2Q9HBD1 RNU6-947P-201ENST00000516264 106 ntBASIC1.83□□□□□ -2.12
RC3H2Q9HBD1 RNU7-156P-201ENST00000517214 74 ntBASIC1.83□□□□□ -2.12
RC3H2Q9HBD1 MIR3140-201ENST00000583685 90 ntBASIC1.83□□□□□ -2.12
RC3H2Q9HBD1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.83□□□□□ -2.12
RC3H2Q9HBD1 AC013244.2-201ENST00000603396 103 ntBASIC1.83□□□□□ -2.12
RC3H2Q9HBD1 MIR103A2-201ENST00000362154 78 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 RNA5SP264-201ENST00000363115 107 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 RNU6-340P-201ENST00000364005 107 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 MIR154-201ENST00000385243 84 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 RNU6-663P-201ENST00000391105 106 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 MIR18B-201ENST00000454574 71 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 snoU13.21-201ENST00000459368 105 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 AL133373.1-201ENST00000497098 94 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 Y_RNA.809-201ENST00000516058 95 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 AC019176.1-201ENST00000518519 225 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 MIR3198-2-201ENST00000577868 80 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 MIR3937-201ENST00000580135 106 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 MIR4696-201ENST00000581431 70 ntBASIC1.82□□□□□ -2.12
RC3H2Q9HBD1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RC3H2Q9HBD1 RNU6-1260P-201ENST00000362944 107 ntBASIC1.81□□□□□ -2.12
RC3H2Q9HBD1 SNORD1A-201ENST00000364968 72 ntBASIC1.81□□□□□ -2.12
RC3H2Q9HBD1 RNU6-471P-201ENST00000383944 106 ntBASIC1.81□□□□□ -2.12
RC3H2Q9HBD1 MIR499A-201ENST00000384903 122 ntBASIC1.81□□□□□ -2.12
RC3H2Q9HBD1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RC3H2Q9HBD1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
RC3H2Q9HBD1 AL645939.4-201ENST00000604495 135 ntBASIC1.81□□□□□ -2.12
RC3H2Q9HBD1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.81□□□□□ -2.12
RC3H2Q9HBD1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.81□□□□□ -2.12
RC3H2Q9HBD1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RC3H2Q9HBD1 RNU6-664P-201ENST00000362381 107 ntBASIC1.8□□□□□ -2.12
RC3H2Q9HBD1 Y_RNA.239-201ENST00000364444 113 ntBASIC1.8□□□□□ -2.12
RC3H2Q9HBD1 Y_RNA.371-201ENST00000365591 113 ntBASIC1.8□□□□□ -2.12
RC3H2Q9HBD1 AC092628.1-201ENST00000436250 252 ntBASIC1.8□□□□□ -2.12
RC3H2Q9HBD1 MIR548H5-201ENST00000580314 60 ntBASIC1.8□□□□□ -2.12
RC3H2Q9HBD1 MTRNR2L2-201ENST00000604882 87 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms