Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR6082-201ENST00000613604 109 ntBASIC1.48□□□□□ -2.17
SSBP3Q9BWW4 RNU6-1260P-201ENST00000362944 107 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 SNORD113.3-201ENST00000364630 78 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 RNU6-934P-201ENST00000365154 107 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 AC092628.1-201ENST00000436250 252 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 RNU6-765P-201ENST00000516916 99 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 YWHAEP2-201ENST00000580066 112 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 YWHAEP3-201ENST00000582767 121 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 AC103810.8-201ENST00000607347 118 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 TRDV1-202ENST00000621643 102 ntBASIC1.47□□□□□ -2.17
SSBP3Q9BWW4 MIR302D-201ENST00000362275 68 ntBASIC1.46□□□□□ -2.18
SSBP3Q9BWW4 Y_RNA.12-201ENST00000362393 112 ntBASIC1.46□□□□□ -2.18
SSBP3Q9BWW4 MIR520H-201ENST00000385126 88 ntBASIC1.46□□□□□ -2.18
SSBP3Q9BWW4 SNORD83.1-201ENST00000411362 77 ntBASIC1.46□□□□□ -2.18
SSBP3Q9BWW4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.46□□□□□ -2.18
SSBP3Q9BWW4 RNU6-1015P-201ENST00000517121 99 ntBASIC1.46□□□□□ -2.18
SSBP3Q9BWW4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.46□□□□□ -2.18
SSBP3Q9BWW4 MIR502-201ENST00000606349 86 ntBASIC1.46□□□□□ -2.18
SSBP3Q9BWW4 RNU6-664P-201ENST00000362381 107 ntBASIC1.45□□□□□ -2.18
SSBP3Q9BWW4 RNU6-1051P-201ENST00000365471 102 ntBASIC1.45□□□□□ -2.18
SSBP3Q9BWW4 snoU13.21-201ENST00000459368 105 ntBASIC1.45□□□□□ -2.18
SSBP3Q9BWW4 RNU6-539P-201ENST00000516665 103 ntBASIC1.45□□□□□ -2.18
SSBP3Q9BWW4 MIR4419B-201ENST00000577260 68 ntBASIC1.45□□□□□ -2.18
SSBP3Q9BWW4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
SSBP3Q9BWW4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 RNA5SP432-201ENST00000362480 116 ntBASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 RNA5SP99-201ENST00000364020 114 ntBASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 RNA5SP190-201ENST00000365222 118 ntBASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 SNORD101-201ENST00000384027 73 ntBASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 Y_RNA.532-201ENST00000384590 113 ntBASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 MIR125B2-201ENST00000385128 89 ntBASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 AC097635.1-201ENST00000450678 155 ntBASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 AC138907.6-201ENST00000568401 126 ntBASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 AC138869.1-201ENST00000568623 124 ntBASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 MIR8081-201ENST00000611533 95 ntBASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SSBP3Q9BWW4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 SNORD90-201ENST00000391145 111 ntBASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 AC074348.1-201ENST00000426503 132 ntBASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 RNU6-165P-201ENST00000517170 99 ntBASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 AL512310.8-201ENST00000550183 120 ntBASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 MIR4771-2-201ENST00000577758 74 ntBASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 MIR4771-1-201ENST00000582617 74 ntBASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.43□□□□□ -2.18
SSBP3Q9BWW4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 RNU1-17P-201ENST00000363022 152 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 RNU6-681P-201ENST00000364012 104 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 SNORD111-201ENST00000408139 94 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 Y_RNA.596-201ENST00000410462 109 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 snoU13.17-201ENST00000458802 104 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 RNU6-634P-201ENST00000459134 106 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 RNU6-687P-201ENST00000516443 89 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 RNU7-156P-201ENST00000517214 74 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 AC036111.3-201ENST00000526389 112 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 MIR4696-201ENST00000581431 70 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.42□□□□□ -2.18
SSBP3Q9BWW4 Y_RNA.371-201ENST00000365591 113 ntBASIC1.41□□□□□ -2.18
SSBP3Q9BWW4 SNORA8.1-201ENST00000384250 140 ntBASIC1.41□□□□□ -2.18
SSBP3Q9BWW4 RNU6-364P-201ENST00000384387 107 ntBASIC1.41□□□□□ -2.18
SSBP3Q9BWW4 MIR599-201ENST00000385069 95 ntBASIC1.41□□□□□ -2.18
SSBP3Q9BWW4 RNU6-587P-201ENST00000391282 106 ntBASIC1.41□□□□□ -2.18
SSBP3Q9BWW4 AL606490.4-201ENST00000423117 127 ntBASIC1.41□□□□□ -2.18
SSBP3Q9BWW4 SNORD13-201ENST00000459299 104 ntBASIC1.41□□□□□ -2.18
SSBP3Q9BWW4 AC008834.1-201ENST00000511612 175 ntBASIC1.41□□□□□ -2.18
SSBP3Q9BWW4 RNA5SP363-201ENST00000365072 115 ntBASIC1.4□□□□□ -2.19
SSBP3Q9BWW4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SSBP3Q9BWW4 RPS26P5-201ENST00000418544 335 ntBASIC1.4□□□□□ -2.19
SSBP3Q9BWW4 AC048334.1-201ENST00000477975 159 ntBASIC1.4□□□□□ -2.19
SSBP3Q9BWW4 RN7SKP88-201ENST00000516847 250 ntBASIC1.4□□□□□ -2.19
SSBP3Q9BWW4 7SK.8-201ENST00000612110 250 ntBASIC1.4□□□□□ -2.19
SSBP3Q9BWW4 7SK.11-201ENST00000615477 250 ntBASIC1.4□□□□□ -2.19
SSBP3Q9BWW4 7SK.13-201ENST00000622040 250 ntBASIC1.4□□□□□ -2.19
SSBP3Q9BWW4 U6.100-201ENST00000636230 99 ntBASIC1.4□□□□□ -2.19
SSBP3Q9BWW4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SSBP3Q9BWW4 Y_RNA.36-201ENST00000362602 112 ntBASIC1.39□□□□□ -2.19
SSBP3Q9BWW4 RNU6-649P-201ENST00000384463 107 ntBASIC1.39□□□□□ -2.19
SSBP3Q9BWW4 RNU6-535P-201ENST00000384722 107 ntBASIC1.39□□□□□ -2.19
SSBP3Q9BWW4 MIR154-201ENST00000385243 84 ntBASIC1.39□□□□□ -2.19
SSBP3Q9BWW4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.39□□□□□ -2.19
SSBP3Q9BWW4 AC125388.1-201ENST00000459631 156 ntBASIC1.39□□□□□ -2.19
SSBP3Q9BWW4 RNA5SP458-201ENST00000516188 119 ntBASIC1.39□□□□□ -2.19
SSBP3Q9BWW4 MIR4255-201ENST00000579351 72 ntBASIC1.39□□□□□ -2.19
SSBP3Q9BWW4 AC106800.4-201ENST00000614905 153 ntBASIC1.39□□□□□ -2.19
SSBP3Q9BWW4 MIR664A-201ENST00000626086 82 ntBASIC1.39□□□□□ -2.19
SSBP3Q9BWW4 RNU6-340P-201ENST00000364005 107 ntBASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 MIR938-201ENST00000401216 83 ntBASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 MIR934-201ENST00000401241 83 ntBASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 AL591704.2-201ENST00000421658 181 ntBASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 SNORA31.2-201ENST00000516019 134 ntBASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 RNU6-1057P-201ENST00000517162 102 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 368 ms