Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RNU4-90P-201ENST00000362773 141 ntBASIC-1.42□□□□□ -2.64
LIMD2Q9BT23 SNORD113-8-201ENST00000363497 74 ntBASIC-1.42□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.42□□□□□ -2.64
LIMD2Q9BT23 RNU4-43P-201ENST00000410628 137 ntBASIC-1.42□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.42□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.42□□□□□ -2.64
LIMD2Q9BT23 AC082651.2-201ENST00000496833 166 ntBASIC-1.42□□□□□ -2.64
LIMD2Q9BT23 RNU6-850P-201ENST00000516934 103 ntBASIC-1.42□□□□□ -2.64
LIMD2Q9BT23 AC090617.8-201ENST00000623339 167 ntBASIC-1.42□□□□□ -2.64
LIMD2Q9BT23 RNU6-208P-201ENST00000362431 107 ntBASIC-1.43□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.43□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.43□□□□□ -2.64
LIMD2Q9BT23 SNORA26.4-201ENST00000391188 123 ntBASIC-1.43□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.43□□□□□ -2.64
LIMD2Q9BT23 RNU4-69P-201ENST00000410677 143 ntBASIC-1.43□□□□□ -2.64
LIMD2Q9BT23 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.43□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.43□□□□□ -2.64
LIMD2Q9BT23 RNU6-699P-201ENST00000517081 110 ntBASIC-1.43□□□□□ -2.64
LIMD2Q9BT23 AC084781.2-201ENST00000615568 161 ntBASIC-1.43□□□□□ -2.64
LIMD2Q9BT23 RNU6-845P-201ENST00000362578 103 ntBASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 MIR516A2-201ENST00000384888 90 ntBASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 MIR516A1-201ENST00000385033 90 ntBASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 RNU6-130P-201ENST00000411112 103 ntBASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 RNU2-4P-201ENST00000606190 192 ntBASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 AC025253.1-201ENST00000613623 543 ntBASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 AC087741.2-201ENST00000619415 172 ntBASIC-1.44□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 RNU6-102P-201ENST00000384485 104 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 MIR507-201ENST00000385234 94 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 SNORA79-201ENST00000408376 140 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 RPL35AP4-201ENST00000412007 102 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 FGF7P6-202ENST00000451282 293 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 RNU7-2P-201ENST00000516096 62 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 RNU2-35P-201ENST00000516446 142 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 TRDV1-202ENST00000621643 102 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 MIR664B-201ENST00000626756 61 ntBASIC-1.45□□□□□ -2.64
LIMD2Q9BT23 SNORD115-33-201ENST00000363723 82 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 SNORD114-4-201ENST00000363962 75 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 RNU6-978P-201ENST00000364371 103 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 RNU6-326P-201ENST00000365480 107 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 RNU6-662P-201ENST00000384253 104 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 SNORD115-46-201ENST00000390982 71 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 AC090616.4-201ENST00000448026 115 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 SNORD116-25-201ENST00000516517 92 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 SNORD116.3-201ENST00000517176 78 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 MIR376B-201ENST00000614515 100 ntBASIC-1.46□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.47□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.47□□□□□ -2.64
LIMD2Q9BT23 AL161932.1-201ENST00000437408 146 ntBASIC-1.47□□□□□ -2.64
LIMD2Q9BT23 RNU6-168P-201ENST00000516189 101 ntBASIC-1.47□□□□□ -2.64
LIMD2Q9BT23 RNU6-453P-201ENST00000516819 85 ntBASIC-1.47□□□□□ -2.64
LIMD2Q9BT23 SNORA20.3-201ENST00000516880 132 ntBASIC-1.47□□□□□ -2.64
LIMD2Q9BT23 U6.100-201ENST00000636230 99 ntBASIC-1.47□□□□□ -2.64
LIMD2Q9BT23 MIR3974-201ENST00000637126 96 ntBASIC-1.47□□□□□ -2.64
LIMD2Q9BT23 UBE2WP1-201ENST00000362030 340 ntBASIC-1.48□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.48□□□□□ -2.65
LIMD2Q9BT23 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.48□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.48□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.48□□□□□ -2.65
LIMD2Q9BT23 MT-TM-201ENST00000387377 68 ntBASIC-1.48□□□□□ -2.65
LIMD2Q9BT23 MTATP6P19-201ENST00000413797 659 ntBASIC-1.48□□□□□ -2.65
LIMD2Q9BT23 SNORD42B-201ENST00000458893 67 ntBASIC-1.48□□□□□ -2.65
LIMD2Q9BT23 RNU7-30P-201ENST00000516835 62 ntBASIC-1.48□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 RNU1-115P-201ENST00000365329 160 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 SNORA62.4-201ENST00000365504 151 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 RNU6-54P-201ENST00000365563 107 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 RNU6-211P-201ENST00000384047 107 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 AC009779.6-201ENST00000603972 165 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 AC078883.4-201ENST00000623218 367 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 AL606534.2-204ENST00000635008 178 ntBASIC-1.49□□□□□ -2.65
LIMD2Q9BT23 SNORD36A-201ENST00000362874 73 ntBASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 SNORD77B-201ENST00000391112 67 ntBASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 RNU6-561P-201ENST00000516222 102 ntBASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 AC108081.1-201ENST00000604358 221 ntBASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 MIR376A1-201ENST00000616574 68 ntBASIC-1.5□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.51□□□□□ -2.65
LIMD2Q9BT23 SNORD115-27-201ENST00000364430 82 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 260.7 ms