Protein–RNA interactions for Protein: Q9BQ83

SLX1A, Structure-specific endonuclease subunit SLX1, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1AQ9BQ83 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
SLX1AQ9BQ83 RPL39P34-201ENST00000477141 156 ntBASIC0.47□□□□□ -2.33
SLX1AQ9BQ83 RNU6-1333P-201ENST00000516162 93 ntBASIC0.47□□□□□ -2.33
SLX1AQ9BQ83 SNORD33.1-201ENST00000516213 88 ntBASIC0.47□□□□□ -2.33
SLX1AQ9BQ83 RNU6-1018P-201ENST00000516577 106 ntBASIC0.47□□□□□ -2.33
SLX1AQ9BQ83 AL162726.3-218ENST00000636401 95 ntBASIC0.47□□□□□ -2.33
SLX1AQ9BQ83 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
SLX1AQ9BQ83 RNU6-1313P-201ENST00000362622 102 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 Y_RNA.155-201ENST00000363632 101 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 RNU6-571P-201ENST00000384128 107 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 MIR548A3-201ENST00000385297 97 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 RNU6-816P-201ENST00000390914 107 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 RNU6-1268P-201ENST00000391214 107 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 RNU6-1239P-201ENST00000391310 107 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 BX276092.1-201ENST00000427368 251 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 AC008267.6-201ENST00000441664 139 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 AC244505.6-201ENST00000452829 130 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 AC007012.1-201ENST00000567192 175 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 AL512310.12-203ENST00000640543 90 ntBASIC0.46□□□□□ -2.34
SLX1AQ9BQ83 SNORD28-201ENST00000384706 75 ntBASIC0.45□□□□□ -2.34
SLX1AQ9BQ83 Y_RNA.563-201ENST00000384707 108 ntBASIC0.45□□□□□ -2.34
SLX1AQ9BQ83 SNORA40.8-201ENST00000411034 126 ntBASIC0.45□□□□□ -2.34
SLX1AQ9BQ83 SNORD71-201ENST00000411292 86 ntBASIC0.45□□□□□ -2.34
SLX1AQ9BQ83 SCARNA16.5-201ENST00000517114 183 ntBASIC0.45□□□□□ -2.34
SLX1AQ9BQ83 RNA5SP47-201ENST00000517230 109 ntBASIC0.45□□□□□ -2.34
SLX1AQ9BQ83 AL670379.3-201ENST00000605040 251 ntBASIC0.45□□□□□ -2.34
SLX1AQ9BQ83 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
SLX1AQ9BQ83 AL109933.3-201ENST00000619095 188 ntBASIC0.45□□□□□ -2.34
SLX1AQ9BQ83 AC090625.1-201ENST00000357130 210 ntBASIC0.44□□□□□ -2.34
SLX1AQ9BQ83 SNORA36.1-201ENST00000363424 132 ntBASIC0.44□□□□□ -2.34
SLX1AQ9BQ83 Y_RNA.309-201ENST00000365046 111 ntBASIC0.44□□□□□ -2.34
SLX1AQ9BQ83 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
SLX1AQ9BQ83 SNORA8.2-201ENST00000384372 139 ntBASIC0.44□□□□□ -2.34
SLX1AQ9BQ83 SNRPGP12-201ENST00000449481 213 ntBASIC0.44□□□□□ -2.34
SLX1AQ9BQ83 MIR3910-1-201ENST00000580936 111 ntBASIC0.44□□□□□ -2.34
SLX1AQ9BQ83 MIR6828-201ENST00000636181 60 ntBASIC0.44□□□□□ -2.34
SLX1AQ9BQ83 RNU6-170P-201ENST00000362832 104 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 Y_RNA.353-201ENST00000365440 108 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 RNU6-716P-201ENST00000365621 103 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 MIR518A1-201ENST00000385068 85 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 AL353813.1-201ENST00000440700 253 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 TRAJ51-201ENST00000504127 63 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 RNA5SP268-201ENST00000516828 124 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 AC244669.1-204ENST00000621564 178 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 AL035470.1-201ENST00000622571 220 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 AC132825.6-201ENST00000638861 357 ntBASIC0.43□□□□□ -2.34
SLX1AQ9BQ83 MIR103A1-201ENST00000362165 78 ntBASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 SNORD115-24-201ENST00000363528 82 ntBASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 SNORD118-201ENST00000363593 134 ntBASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 SNORD38.1-201ENST00000363863 68 ntBASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 MIR548A1-201ENST00000385041 97 ntBASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 MIR519A1-201ENST00000385257 85 ntBASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 AC097635.1-201ENST00000450678 155 ntBASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 RNU6-1006P-201ENST00000516998 103 ntBASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 MTND5P40-201ENST00000559945 246 ntBASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 AC091304.10-201ENST00000641554 121 ntBASIC0.42□□□□□ -2.34
SLX1AQ9BQ83 RNU6-1201P-201ENST00000384227 107 ntBASIC0.41□□□□□ -2.34
SLX1AQ9BQ83 RNU6-1117P-201ENST00000384525 104 ntBASIC0.41□□□□□ -2.34
SLX1AQ9BQ83 RNU6-850P-201ENST00000516934 103 ntBASIC0.41□□□□□ -2.34
SLX1AQ9BQ83 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
SLX1AQ9BQ83 Y_RNA.49-201ENST00000362714 112 ntBASIC0.4□□□□□ -2.35
SLX1AQ9BQ83 Y_RNA.261-201ENST00000364631 102 ntBASIC0.4□□□□□ -2.35
SLX1AQ9BQ83 Y_RNA.342-201ENST00000365352 113 ntBASIC0.4□□□□□ -2.35
SLX1AQ9BQ83 Y_RNA.549-201ENST00000384657 102 ntBASIC0.4□□□□□ -2.35
SLX1AQ9BQ83 SNORD63B-201ENST00000411005 70 ntBASIC0.4□□□□□ -2.35
SLX1AQ9BQ83 RNA5SP227-201ENST00000516184 113 ntBASIC0.4□□□□□ -2.35
SLX1AQ9BQ83 RNU6-62P-201ENST00000516526 102 ntBASIC0.4□□□□□ -2.35
SLX1AQ9BQ83 AL365222.1-201ENST00000614661 98 ntBASIC0.4□□□□□ -2.35
SLX1AQ9BQ83 AL442128.1-201ENST00000615151 90 ntBASIC0.4□□□□□ -2.35
SLX1AQ9BQ83 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SLX1AQ9BQ83 RNA5SP257-201ENST00000363023 116 ntBASIC0.39□□□□□ -2.35
SLX1AQ9BQ83 Y_RNA.377-201ENST00000365644 108 ntBASIC0.39□□□□□ -2.35
SLX1AQ9BQ83 RNU6-880P-201ENST00000384526 107 ntBASIC0.39□□□□□ -2.35
SLX1AQ9BQ83 MIR599-201ENST00000385069 95 ntBASIC0.39□□□□□ -2.35
SLX1AQ9BQ83 SPINT5P-201ENST00000448174 155 ntBASIC0.39□□□□□ -2.35
SLX1AQ9BQ83 AC068339.1-201ENST00000526965 141 ntBASIC0.39□□□□□ -2.35
SLX1AQ9BQ83 RNU6-90P-201ENST00000606352 106 ntBASIC0.39□□□□□ -2.35
SLX1AQ9BQ83 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.39□□□□□ -2.35
SLX1AQ9BQ83 RNU6-1099P-201ENST00000363533 107 ntBASIC0.38□□□□□ -2.35
SLX1AQ9BQ83 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
SLX1AQ9BQ83 RNU6-22P-201ENST00000384355 107 ntBASIC0.38□□□□□ -2.35
SLX1AQ9BQ83 MIR548G-201ENST00000408442 89 ntBASIC0.38□□□□□ -2.35
SLX1AQ9BQ83 MIR1197-201ENST00000408818 88 ntBASIC0.38□□□□□ -2.35
SLX1AQ9BQ83 MIR4694-201ENST00000578534 80 ntBASIC0.38□□□□□ -2.35
SLX1AQ9BQ83 AC096720.1-201ENST00000604441 183 ntBASIC0.38□□□□□ -2.35
SLX1AQ9BQ83 MIR7107-201ENST00000611489 80 ntBASIC0.38□□□□□ -2.35
SLX1AQ9BQ83 Y_RNA.35-201ENST00000362601 101 ntBASIC0.37□□□□□ -2.35
SLX1AQ9BQ83 Y_RNA.247-201ENST00000364500 92 ntBASIC0.37□□□□□ -2.35
SLX1AQ9BQ83 Y_RNA.281-201ENST00000364774 94 ntBASIC0.37□□□□□ -2.35
SLX1AQ9BQ83 SNORD116-21-201ENST00000384507 92 ntBASIC0.37□□□□□ -2.35
SLX1AQ9BQ83 RNU6-1168P-201ENST00000390831 104 ntBASIC0.37□□□□□ -2.35
SLX1AQ9BQ83 RNU7-195P-201ENST00000458793 62 ntBASIC0.37□□□□□ -2.35
SLX1AQ9BQ83 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.37□□□□□ -2.35
SLX1AQ9BQ83 RNU6-863P-201ENST00000515989 104 ntBASIC0.37□□□□□ -2.35
SLX1AQ9BQ83 Y_RNA.809-201ENST00000516058 95 ntBASIC0.37□□□□□ -2.35
SLX1AQ9BQ83 Y_RNA.681-201ENST00000516445 113 ntBASIC0.37□□□□□ -2.35
SLX1AQ9BQ83 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 279.3 ms