Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNA5SP403-201ENST00000363598 108 ntBASIC0.19□□□□□ -2.38
NR1H4Q96RI1 SNORA2A-201ENST00000383885 135 ntBASIC0.19□□□□□ -2.38
NR1H4Q96RI1 RNU6-815P-201ENST00000384080 113 ntBASIC0.19□□□□□ -2.38
NR1H4Q96RI1 Y_RNA.466-201ENST00000384294 113 ntBASIC0.19□□□□□ -2.38
NR1H4Q96RI1 Y_RNA.506-201ENST00000384494 102 ntBASIC0.19□□□□□ -2.38
NR1H4Q96RI1 RNU6-257P-201ENST00000410238 98 ntBASIC0.19□□□□□ -2.38
NR1H4Q96RI1 RNU6-735P-201ENST00000410612 107 ntBASIC0.19□□□□□ -2.38
NR1H4Q96RI1 RNU7-129P-201ENST00000516128 62 ntBASIC0.19□□□□□ -2.38
NR1H4Q96RI1 RNU6-1234P-201ENST00000516877 103 ntBASIC0.19□□□□□ -2.38
NR1H4Q96RI1 MTND5P18-201ENST00000445624 1801 ntBASIC0.19□□□□□ -2.38
NR1H4Q96RI1 RNU6-363P-201ENST00000362895 105 ntBASIC0.18□□□□□ -2.38
NR1H4Q96RI1 SNORD114-26-201ENST00000363543 72 ntBASIC0.18□□□□□ -2.38
NR1H4Q96RI1 Y_RNA.155-201ENST00000363632 101 ntBASIC0.18□□□□□ -2.38
NR1H4Q96RI1 RNU6-187P-201ENST00000384139 106 ntBASIC0.18□□□□□ -2.38
NR1H4Q96RI1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.18□□□□□ -2.38
NR1H4Q96RI1 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
NR1H4Q96RI1 RNU7-195P-201ENST00000458793 62 ntBASIC0.18□□□□□ -2.38
NR1H4Q96RI1 RNU6-850P-201ENST00000516934 103 ntBASIC0.18□□□□□ -2.38
NR1H4Q96RI1 MIR1273G-201ENST00000577677 100 ntBASIC0.18□□□□□ -2.38
NR1H4Q96RI1 MIR6755-201ENST00000619993 66 ntBASIC0.18□□□□□ -2.38
NR1H4Q96RI1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
NR1H4Q96RI1 Y_RNA.342-201ENST00000365352 113 ntBASIC0.17□□□□□ -2.38
NR1H4Q96RI1 RNU6-409P-201ENST00000384114 104 ntBASIC0.17□□□□□ -2.38
NR1H4Q96RI1 MIR760-201ENST00000390220 80 ntBASIC0.17□□□□□ -2.38
NR1H4Q96RI1 RNU6-772P-201ENST00000516042 105 ntBASIC0.17□□□□□ -2.38
NR1H4Q96RI1 MIR4514-201ENST00000581410 57 ntBASIC0.17□□□□□ -2.38
NR1H4Q96RI1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.16□□□□□ -2.38
NR1H4Q96RI1 RNU6-907P-201ENST00000390924 102 ntBASIC0.16□□□□□ -2.38
NR1H4Q96RI1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
NR1H4Q96RI1 AC073869.9-201ENST00000641610 120 ntBASIC0.16□□□□□ -2.38
NR1H4Q96RI1 AL157777.2-201ENST00000258070 137 ntBASIC0.15□□□□□ -2.39
NR1H4Q96RI1 RNU6-1313P-201ENST00000362622 102 ntBASIC0.15□□□□□ -2.39
NR1H4Q96RI1 MIR7-2-201ENST00000384970 110 ntBASIC0.15□□□□□ -2.39
NR1H4Q96RI1 MIR548I1-201ENST00000408810 149 ntBASIC0.15□□□□□ -2.39
NR1H4Q96RI1 RNU6-1018P-201ENST00000516577 106 ntBASIC0.15□□□□□ -2.39
NR1H4Q96RI1 SNORA62.5-201ENST00000516634 120 ntBASIC0.15□□□□□ -2.39
NR1H4Q96RI1 MIR6779-201ENST00000617283 64 ntBASIC0.15□□□□□ -2.39
NR1H4Q96RI1 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
NR1H4Q96RI1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
NR1H4Q96RI1 RNU6-1260P-201ENST00000362944 107 ntBASIC0.14□□□□□ -2.39
NR1H4Q96RI1 Y_RNA.344-201ENST00000365381 112 ntBASIC0.14□□□□□ -2.39
NR1H4Q96RI1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
NR1H4Q96RI1 MIR1912-201ENST00000410389 80 ntBASIC0.14□□□□□ -2.39
NR1H4Q96RI1 SPINT5P-201ENST00000448174 155 ntBASIC0.14□□□□□ -2.39
NR1H4Q96RI1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.14□□□□□ -2.39
NR1H4Q96RI1 RNU7-13P-201ENST00000516413 62 ntBASIC0.14□□□□□ -2.39
NR1H4Q96RI1 MIR4752-201ENST00000579672 72 ntBASIC0.14□□□□□ -2.39
NR1H4Q96RI1 U7.6-201ENST00000610841 64 ntBASIC0.14□□□□□ -2.39
NR1H4Q96RI1 AL162376.1-201ENST00000624117 175 ntBASIC0.14□□□□□ -2.39
NR1H4Q96RI1 SNORD38.1-201ENST00000363863 68 ntBASIC0.13□□□□□ -2.39
NR1H4Q96RI1 RNA5SP128-201ENST00000365305 116 ntBASIC0.13□□□□□ -2.39
NR1H4Q96RI1 Y_RNA.362-201ENST00000365518 110 ntBASIC0.13□□□□□ -2.39
NR1H4Q96RI1 RNU6-816P-201ENST00000390914 107 ntBASIC0.13□□□□□ -2.39
NR1H4Q96RI1 SNORD41.1-201ENST00000391000 69 ntBASIC0.13□□□□□ -2.39
NR1H4Q96RI1 RNU6-1268P-201ENST00000391214 107 ntBASIC0.13□□□□□ -2.39
NR1H4Q96RI1 RNU6-1239P-201ENST00000391310 107 ntBASIC0.13□□□□□ -2.39
NR1H4Q96RI1 RNU6-1265P-201ENST00000516342 103 ntBASIC0.13□□□□□ -2.39
NR1H4Q96RI1 RNU6-509P-201ENST00000363519 107 ntBASIC0.12□□□□□ -2.39
NR1H4Q96RI1 RNU6-524P-201ENST00000384270 107 ntBASIC0.12□□□□□ -2.39
NR1H4Q96RI1 Y_RNA.586-201ENST00000391146 98 ntBASIC0.12□□□□□ -2.39
NR1H4Q96RI1 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
NR1H4Q96RI1 RNU7-74P-201ENST00000459104 62 ntBASIC0.12□□□□□ -2.39
NR1H4Q96RI1 Y_RNA.703-201ENST00000516846 111 ntBASIC0.12□□□□□ -2.39
NR1H4Q96RI1 RNU6-971P-201ENST00000516920 106 ntBASIC0.12□□□□□ -2.39
NR1H4Q96RI1 RNU6-90P-201ENST00000606352 106 ntBASIC0.12□□□□□ -2.39
NR1H4Q96RI1 AL162726.3-218ENST00000636401 95 ntBASIC0.12□□□□□ -2.39
NR1H4Q96RI1 Y_RNA.35-201ENST00000362601 101 ntBASIC0.11□□□□□ -2.39
NR1H4Q96RI1 RPL39P34-201ENST00000477141 156 ntBASIC0.11□□□□□ -2.39
NR1H4Q96RI1 MIR5706-201ENST00000579841 80 ntBASIC0.11□□□□□ -2.39
NR1H4Q96RI1 MIR8087-201ENST00000612745 78 ntBASIC0.11□□□□□ -2.39
NR1H4Q96RI1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.11□□□□□ -2.39
NR1H4Q96RI1 MIR330-201ENST00000362196 94 ntBASIC0.1□□□□□ -2.39
NR1H4Q96RI1 Y_RNA.85-201ENST00000363014 111 ntBASIC0.1□□□□□ -2.39
NR1H4Q96RI1 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
NR1H4Q96RI1 Y_RNA.323-201ENST00000365157 109 ntBASIC0.1□□□□□ -2.39
NR1H4Q96RI1 MIR516A2-201ENST00000384888 90 ntBASIC0.1□□□□□ -2.39
NR1H4Q96RI1 MIR516A1-201ENST00000385033 90 ntBASIC0.1□□□□□ -2.39
NR1H4Q96RI1 MIR610-201ENST00000385139 96 ntBASIC0.1□□□□□ -2.39
NR1H4Q96RI1 RNU6-1254P-201ENST00000391266 104 ntBASIC0.1□□□□□ -2.39
NR1H4Q96RI1 MIR548G-201ENST00000408442 89 ntBASIC0.1□□□□□ -2.39
NR1H4Q96RI1 RNU6-80P-201ENST00000384195 107 ntBASIC0.09□□□□□ -2.4
NR1H4Q96RI1 RNU6-269P-201ENST00000391077 97 ntBASIC0.09□□□□□ -2.4
NR1H4Q96RI1 RNU6-243P-201ENST00000391140 107 ntBASIC0.09□□□□□ -2.4
NR1H4Q96RI1 Y_RNA.630-201ENST00000411370 108 ntBASIC0.09□□□□□ -2.4
NR1H4Q96RI1 RNU7-106P-201ENST00000459514 67 ntBASIC0.09□□□□□ -2.4
NR1H4Q96RI1 Y_RNA.660-201ENST00000516002 120 ntBASIC0.09□□□□□ -2.4
NR1H4Q96RI1 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
NR1H4Q96RI1 AC096720.1-201ENST00000604441 183 ntBASIC0.09□□□□□ -2.4
NR1H4Q96RI1 Y_RNA.57-201ENST00000362806 113 ntBASIC0.08□□□□□ -2.4
NR1H4Q96RI1 Y_RNA.309-201ENST00000365046 111 ntBASIC0.08□□□□□ -2.4
NR1H4Q96RI1 MIR1197-201ENST00000408818 88 ntBASIC0.08□□□□□ -2.4
NR1H4Q96RI1 RNU7-107P-201ENST00000459121 61 ntBASIC0.08□□□□□ -2.4
NR1H4Q96RI1 SNORD115-44-201ENST00000365391 82 ntBASIC0.07□□□□□ -2.4
NR1H4Q96RI1 RNU6-127P-201ENST00000390897 107 ntBASIC0.07□□□□□ -2.4
NR1H4Q96RI1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.07□□□□□ -2.4
NR1H4Q96RI1 RNU6-1006P-201ENST00000516998 103 ntBASIC0.07□□□□□ -2.4
NR1H4Q96RI1 RNA5SP330-201ENST00000517096 96 ntBASIC0.07□□□□□ -2.4
NR1H4Q96RI1 MIR3133-201ENST00000583157 78 ntBASIC0.07□□□□□ -2.4
NR1H4Q96RI1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.07□□□□□ -2.4
NR1H4Q96RI1 AL442128.1-201ENST00000615151 90 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 285 ms