Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU6-1054P-201ENST00000411293 104 ntBASIC2.35□□□□□ -2.03
CNTNAP3BQ96NU0 AC055731.1-201ENST00000474387 401 ntBASIC2.35□□□□□ -2.03
CNTNAP3BQ96NU0 MIR4446-201ENST00000578505 67 ntBASIC2.35□□□□□ -2.03
CNTNAP3BQ96NU0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CNTNAP3BQ96NU0 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
CNTNAP3BQ96NU0 MIR101-2-201ENST00000362195 79 ntBASIC2.34□□□□□ -2.03
CNTNAP3BQ96NU0 MIR513A1-201ENST00000385138 129 ntBASIC2.34□□□□□ -2.03
CNTNAP3BQ96NU0 SNORD41-201ENST00000386967 70 ntBASIC2.34□□□□□ -2.03
CNTNAP3BQ96NU0 SNORD93-201ENST00000408813 74 ntBASIC2.34□□□□□ -2.03
CNTNAP3BQ96NU0 JTBP1-201ENST00000441314 247 ntBASIC2.34□□□□□ -2.03
CNTNAP3BQ96NU0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.34□□□□□ -2.03
CNTNAP3BQ96NU0 SNRPGP19-201ENST00000603826 189 ntBASIC2.34□□□□□ -2.03
CNTNAP3BQ96NU0 AL049779.4-201ENST00000604500 156 ntBASIC2.34□□□□□ -2.03
CNTNAP3BQ96NU0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.04
CNTNAP3BQ96NU0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CNTNAP3BQ96NU0 SNORA16B-201ENST00000364674 135 ntBASIC2.33□□□□□ -2.04
CNTNAP3BQ96NU0 RNA5SP259-201ENST00000365541 109 ntBASIC2.33□□□□□ -2.04
CNTNAP3BQ96NU0 AL359511.1-201ENST00000402970 211 ntBASIC2.33□□□□□ -2.04
CNTNAP3BQ96NU0 SNORD23.1-201ENST00000408212 104 ntBASIC2.33□□□□□ -2.04
CNTNAP3BQ96NU0 RNU6-1265P-201ENST00000516342 103 ntBASIC2.33□□□□□ -2.04
CNTNAP3BQ96NU0 MIR6845-201ENST00000613182 61 ntBASIC2.33□□□□□ -2.04
CNTNAP3BQ96NU0 MIR26A1-201ENST00000362205 77 ntBASIC2.32□□□□□ -2.04
CNTNAP3BQ96NU0 RNU6-668P-201ENST00000364180 107 ntBASIC2.32□□□□□ -2.04
CNTNAP3BQ96NU0 AC097635.1-201ENST00000450678 155 ntBASIC2.32□□□□□ -2.04
CNTNAP3BQ96NU0 snoU13.25-201ENST00000458945 104 ntBASIC2.32□□□□□ -2.04
CNTNAP3BQ96NU0 MIR2115-201ENST00000516657 100 ntBASIC2.32□□□□□ -2.04
CNTNAP3BQ96NU0 Y_RNA.697-201ENST00000516776 113 ntBASIC2.32□□□□□ -2.04
CNTNAP3BQ96NU0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.32□□□□□ -2.04
CNTNAP3BQ96NU0 MIR377-201ENST00000362145 69 ntBASIC2.31□□□□□ -2.04
CNTNAP3BQ96NU0 RNU6-403P-201ENST00000363163 104 ntBASIC2.31□□□□□ -2.04
CNTNAP3BQ96NU0 RNU6-580P-201ENST00000365159 107 ntBASIC2.31□□□□□ -2.04
CNTNAP3BQ96NU0 U3.27-201ENST00000391237 200 ntBASIC2.31□□□□□ -2.04
CNTNAP3BQ96NU0 AL161935.2-201ENST00000414627 60 ntBASIC2.31□□□□□ -2.04
CNTNAP3BQ96NU0 MTND4LP1-201ENST00000446263 157 ntBASIC2.31□□□□□ -2.04
CNTNAP3BQ96NU0 MIR18B-201ENST00000454574 71 ntBASIC2.31□□□□□ -2.04
CNTNAP3BQ96NU0 RN7SL274P-201ENST00000492268 272 ntBASIC2.31□□□□□ -2.04
CNTNAP3BQ96NU0 SCARNA21.1-201ENST00000515996 128 ntBASIC2.31□□□□□ -2.04
CNTNAP3BQ96NU0 MIR514B-201ENST00000516774 80 ntBASIC2.31□□□□□ -2.04
CNTNAP3BQ96NU0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CNTNAP3BQ96NU0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CNTNAP3BQ96NU0 SNORA67.3-201ENST00000384366 140 ntBASIC2.3□□□□□ -2.04
CNTNAP3BQ96NU0 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
CNTNAP3BQ96NU0 AP003716.2-201ENST00000528260 108 ntBASIC2.3□□□□□ -2.04
CNTNAP3BQ96NU0 MIR4635-201ENST00000583759 79 ntBASIC2.3□□□□□ -2.04
CNTNAP3BQ96NU0 AL078603.1-201ENST00000603824 313 ntBASIC2.3□□□□□ -2.04
CNTNAP3BQ96NU0 MIR6734-201ENST00000621166 68 ntBASIC2.3□□□□□ -2.04
CNTNAP3BQ96NU0 MIR6516-201ENST00000630554 81 ntBASIC2.3□□□□□ -2.04
CNTNAP3BQ96NU0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CNTNAP3BQ96NU0 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
CNTNAP3BQ96NU0 RNA5SP393-201ENST00000363423 117 ntBASIC2.29□□□□□ -2.04
CNTNAP3BQ96NU0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CNTNAP3BQ96NU0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CNTNAP3BQ96NU0 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
CNTNAP3BQ96NU0 RMST_2.1-201ENST00000617263 136 ntBASIC2.29□□□□□ -2.04
CNTNAP3BQ96NU0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CNTNAP3BQ96NU0 AC023934.1-201ENST00000574529 2389 ntBASIC2.28□□□□□ -2.04
CNTNAP3BQ96NU0 SNORA67.1-201ENST00000364749 141 ntBASIC2.28□□□□□ -2.04
CNTNAP3BQ96NU0 RNU6-1335P-201ENST00000365426 107 ntBASIC2.28□□□□□ -2.04
CNTNAP3BQ96NU0 MIR5194-201ENST00000582634 120 ntBASIC2.28□□□□□ -2.04
CNTNAP3BQ96NU0 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.28□□□□□ -2.04
CNTNAP3BQ96NU0 AC073869.9-201ENST00000641610 120 ntBASIC2.28□□□□□ -2.04
CNTNAP3BQ96NU0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CNTNAP3BQ96NU0 RNU7-24P-201ENST00000458867 62 ntBASIC2.27□□□□□ -2.05
CNTNAP3BQ96NU0 RNU6-1057P-201ENST00000517162 102 ntBASIC2.27□□□□□ -2.05
CNTNAP3BQ96NU0 MIR3938-201ENST00000582157 103 ntBASIC2.27□□□□□ -2.05
CNTNAP3BQ96NU0 MIR6082-201ENST00000613604 109 ntBASIC2.27□□□□□ -2.05
CNTNAP3BQ96NU0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CNTNAP3BQ96NU0 Y_RNA.13-201ENST00000362403 112 ntBASIC2.26□□□□□ -2.05
CNTNAP3BQ96NU0 RNA5SP276-201ENST00000362580 94 ntBASIC2.26□□□□□ -2.05
CNTNAP3BQ96NU0 MIR599-201ENST00000385069 95 ntBASIC2.26□□□□□ -2.05
CNTNAP3BQ96NU0 MIR1276-201ENST00000408707 83 ntBASIC2.26□□□□□ -2.05
CNTNAP3BQ96NU0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.26□□□□□ -2.05
CNTNAP3BQ96NU0 BX248123.2-201ENST00000606318 124 ntBASIC2.26□□□□□ -2.05
CNTNAP3BQ96NU0 MIR6504-201ENST00000613520 61 ntBASIC2.26□□□□□ -2.05
CNTNAP3BQ96NU0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
CNTNAP3BQ96NU0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CNTNAP3BQ96NU0 MIR1185-1-201ENST00000408598 86 ntBASIC2.25□□□□□ -2.05
CNTNAP3BQ96NU0 SNORD75.2-201ENST00000408784 58 ntBASIC2.25□□□□□ -2.05
CNTNAP3BQ96NU0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.25□□□□□ -2.05
CNTNAP3BQ96NU0 RNU6-122P-201ENST00000516818 107 ntBASIC2.25□□□□□ -2.05
CNTNAP3BQ96NU0 AL137847.3-201ENST00000611521 109 ntBASIC2.25□□□□□ -2.05
CNTNAP3BQ96NU0 MIR219B-201ENST00000637023 88 ntBASIC2.25□□□□□ -2.05
CNTNAP3BQ96NU0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CNTNAP3BQ96NU0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 RNU6-1039P-201ENST00000383931 107 ntBASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 RNU4-88P-201ENST00000411220 86 ntBASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 RNU6-287P-201ENST00000516230 98 ntBASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 RNA5SP220-201ENST00000516298 104 ntBASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 RNU6-922P-201ENST00000516753 99 ntBASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 RNU6-765P-201ENST00000516916 99 ntBASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 AC138907.6-201ENST00000568401 126 ntBASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 AC138869.1-201ENST00000568623 124 ntBASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 AL773524.1-201ENST00000614065 229 ntBASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.24□□□□□ -2.05
CNTNAP3BQ96NU0 MIR144-201ENST00000384886 86 ntBASIC2.23□□□□□ -2.05
CNTNAP3BQ96NU0 AP1B1P2-201ENST00000416196 106 ntBASIC2.23□□□□□ -2.05
CNTNAP3BQ96NU0 RNU7-185P-201ENST00000459215 60 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 268 ms