Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 SNORA25.8-201ENST00000364831 128 ntBASIC1.45□□□□□ -2.18
CLIP3Q96DZ5 MIR1323-201ENST00000408090 73 ntBASIC1.45□□□□□ -2.18
CLIP3Q96DZ5 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
CLIP3Q96DZ5 RNU7-95P-201ENST00000459222 64 ntBASIC1.45□□□□□ -2.18
CLIP3Q96DZ5 Y_RNA.676-201ENST00000516393 96 ntBASIC1.45□□□□□ -2.18
CLIP3Q96DZ5 RNU6-531P-201ENST00000516694 104 ntBASIC1.45□□□□□ -2.18
CLIP3Q96DZ5 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
CLIP3Q96DZ5 AC027335.2-201ENST00000624030 375 ntBASIC1.45□□□□□ -2.18
CLIP3Q96DZ5 RNU1-36P-201ENST00000365130 165 ntBASIC1.44□□□□□ -2.18
CLIP3Q96DZ5 Y_RNA.508-201ENST00000384502 114 ntBASIC1.44□□□□□ -2.18
CLIP3Q96DZ5 SNORA75.2-201ENST00000391138 150 ntBASIC1.44□□□□□ -2.18
CLIP3Q96DZ5 SNORA75.3-201ENST00000391231 150 ntBASIC1.44□□□□□ -2.18
CLIP3Q96DZ5 MIR889-201ENST00000401280 79 ntBASIC1.44□□□□□ -2.18
CLIP3Q96DZ5 AL450471.1-201ENST00000447509 127 ntBASIC1.44□□□□□ -2.18
CLIP3Q96DZ5 MIR18B-201ENST00000454574 71 ntBASIC1.44□□□□□ -2.18
CLIP3Q96DZ5 snoU13.21-201ENST00000459368 105 ntBASIC1.44□□□□□ -2.18
CLIP3Q96DZ5 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.44□□□□□ -2.18
CLIP3Q96DZ5 RNA5SP292-201ENST00000390974 118 ntBASIC1.43□□□□□ -2.18
CLIP3Q96DZ5 RNU6-129P-201ENST00000391022 107 ntBASIC1.43□□□□□ -2.18
CLIP3Q96DZ5 RNU6-1254P-201ENST00000391266 104 ntBASIC1.43□□□□□ -2.18
CLIP3Q96DZ5 RNU7-21P-201ENST00000459430 62 ntBASIC1.43□□□□□ -2.18
CLIP3Q96DZ5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CLIP3Q96DZ5 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
CLIP3Q96DZ5 Y_RNA.283-201ENST00000364798 112 ntBASIC1.42□□□□□ -2.18
CLIP3Q96DZ5 RNU6-132P-201ENST00000383863 107 ntBASIC1.42□□□□□ -2.18
CLIP3Q96DZ5 SNORA72.6-201ENST00000384520 129 ntBASIC1.42□□□□□ -2.18
CLIP3Q96DZ5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
CLIP3Q96DZ5 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
CLIP3Q96DZ5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLIP3Q96DZ5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
CLIP3Q96DZ5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLIP3Q96DZ5 RNU4-58P-201ENST00000363192 141 ntBASIC1.41□□□□□ -2.18
CLIP3Q96DZ5 SNORD93-201ENST00000408813 74 ntBASIC1.41□□□□□ -2.18
CLIP3Q96DZ5 SNORD63B-201ENST00000411005 70 ntBASIC1.41□□□□□ -2.18
CLIP3Q96DZ5 RNU7-90P-201ENST00000459216 62 ntBASIC1.41□□□□□ -2.18
CLIP3Q96DZ5 RNU6-557P-201ENST00000516842 110 ntBASIC1.41□□□□□ -2.18
CLIP3Q96DZ5 MIR4796-201ENST00000580742 81 ntBASIC1.41□□□□□ -2.18
CLIP3Q96DZ5 AC145423.2-201ENST00000610631 239 ntBASIC1.41□□□□□ -2.18
CLIP3Q96DZ5 MIR337-201ENST00000362281 93 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 MIR618-201ENST00000385287 98 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 SNORD100-201ENST00000408573 76 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 RNU6-321P-201ENST00000410912 106 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 TRAJ51-201ENST00000504127 63 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 TRMT112P2-201ENST00000512910 132 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 RNU6-1194P-201ENST00000516208 104 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 RNU7-40P-201ENST00000516397 64 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 MIR3064-201ENST00000581130 66 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 MIR4536-1-201ENST00000583537 88 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 MIR4781-201ENST00000585250 76 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 AL359821.1-201ENST00000605519 182 ntBASIC1.4□□□□□ -2.19
CLIP3Q96DZ5 SNORA63.2-201ENST00000362603 126 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 RNU6-957P-201ENST00000363652 99 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 RNU6-811P-201ENST00000384069 107 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 RNU6-939P-201ENST00000384634 107 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 MIR519A1-201ENST00000385257 85 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 RNU6-243P-201ENST00000391140 107 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 RNU7-185P-201ENST00000459215 60 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 AC139453.2-201ENST00000487255 133 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 SNORA18.5-201ENST00000516616 101 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 Y_RNA.788-201ENST00000622394 112 ntBASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CLIP3Q96DZ5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 MIRLET7A1-201ENST00000362295 80 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 RNU6-403P-201ENST00000363163 104 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 MIR19B1-201ENST00000384829 87 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 MIR520H-201ENST00000385126 88 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 AC002429.1-201ENST00000437672 148 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 RNU6-523P-201ENST00000516304 54 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 RNA5SP404-201ENST00000517118 132 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 AC036111.3-201ENST00000526389 112 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 MIR4421-201ENST00000578133 69 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 AC104996.3-201ENST00000590718 94 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 AC013244.2-201ENST00000603396 103 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
CLIP3Q96DZ5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CLIP3Q96DZ5 Y_RNA.13-201ENST00000362403 112 ntBASIC1.37□□□□□ -2.19
CLIP3Q96DZ5 RNU6-53P-201ENST00000365367 106 ntBASIC1.37□□□□□ -2.19
CLIP3Q96DZ5 SNORD90-201ENST00000391145 111 ntBASIC1.37□□□□□ -2.19
CLIP3Q96DZ5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.37□□□□□ -2.19
CLIP3Q96DZ5 SNORD83.1-201ENST00000411362 77 ntBASIC1.37□□□□□ -2.19
CLIP3Q96DZ5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.37□□□□□ -2.19
CLIP3Q96DZ5 MIR6082-201ENST00000613604 109 ntBASIC1.37□□□□□ -2.19
CLIP3Q96DZ5 AC023934.1-201ENST00000574529 2389 ntBASIC1.37□□□□□ -2.19
CLIP3Q96DZ5 RNU1-124P-201ENST00000363861 145 ntBASIC1.36□□□□□ -2.19
CLIP3Q96DZ5 Y_RNA.532-201ENST00000384590 113 ntBASIC1.36□□□□□ -2.19
CLIP3Q96DZ5 Y_RNA.536-201ENST00000384621 113 ntBASIC1.36□□□□□ -2.19
CLIP3Q96DZ5 AL606490.4-201ENST00000423117 127 ntBASIC1.36□□□□□ -2.19
CLIP3Q96DZ5 AC015818.7-201ENST00000428754 109 ntBASIC1.36□□□□□ -2.19
CLIP3Q96DZ5 AC073261.1-201ENST00000429409 121 ntBASIC1.36□□□□□ -2.19
CLIP3Q96DZ5 RNU7-195P-201ENST00000458793 62 ntBASIC1.36□□□□□ -2.19
CLIP3Q96DZ5 SNORD92-201ENST00000585078 85 ntBASIC1.36□□□□□ -2.19
CLIP3Q96DZ5 MIRLET7F1-201ENST00000362202 87 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 Y_RNA.42-201ENST00000362660 108 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 RNU6-161P-201ENST00000363051 106 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 SNORD113.3-201ENST00000364630 78 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 RNU6-686P-201ENST00000364839 107 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 Y_RNA.565-201ENST00000384719 101 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms