Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RNU1-97P-201ENST00000516872 164 ntBASIC3.2□□□□□ -1.9
TRIM41Q8WV44 AC015688.6-201ENST00000577737 104 ntBASIC3.2□□□□□ -1.9
TRIM41Q8WV44 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM41Q8WV44 MIR1297-201ENST00000637311 77 ntBASIC3.2□□□□□ -1.9
TRIM41Q8WV44 AL596028.1-201ENST00000326971 197 ntBASIC3.19□□□□□ -1.9
TRIM41Q8WV44 MIR520E-201ENST00000384867 87 ntBASIC3.19□□□□□ -1.9
TRIM41Q8WV44 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM41Q8WV44 SNORD23.1-201ENST00000408212 104 ntBASIC3.19□□□□□ -1.9
TRIM41Q8WV44 SNORD100-201ENST00000408573 76 ntBASIC3.19□□□□□ -1.9
TRIM41Q8WV44 RNU7-195P-201ENST00000458793 62 ntBASIC3.19□□□□□ -1.9
TRIM41Q8WV44 AC013244.2-201ENST00000603396 103 ntBASIC3.19□□□□□ -1.9
TRIM41Q8WV44 MIR664A-201ENST00000626086 82 ntBASIC3.19□□□□□ -1.9
TRIM41Q8WV44 AC023934.1-201ENST00000574529 2389 ntBASIC3.18□□□□□ -1.9
TRIM41Q8WV44 RNU6-1194P-201ENST00000516208 104 ntBASIC3.18□□□□□ -1.9
TRIM41Q8WV44 RNU6-250P-201ENST00000516958 103 ntBASIC3.18□□□□□ -1.9
TRIM41Q8WV44 Y_RNA.12-201ENST00000362393 112 ntBASIC3.17□□□□□ -1.9
TRIM41Q8WV44 RNA5SP264-201ENST00000363115 107 ntBASIC3.17□□□□□ -1.9
TRIM41Q8WV44 Y_RNA.536-201ENST00000384621 113 ntBASIC3.17□□□□□ -1.9
TRIM41Q8WV44 MIR9-3-201ENST00000385084 90 ntBASIC3.17□□□□□ -1.9
TRIM41Q8WV44 AC125388.1-201ENST00000459631 156 ntBASIC3.17□□□□□ -1.9
TRIM41Q8WV44 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM41Q8WV44 RNA5SP457-201ENST00000363657 124 ntBASIC3.16□□□□□ -1.9
TRIM41Q8WV44 TRAJ51-201ENST00000504127 63 ntBASIC3.16□□□□□ -1.9
TRIM41Q8WV44 MIR377-201ENST00000362145 69 ntBASIC3.15□□□□□ -1.91
TRIM41Q8WV44 Y_RNA.340-201ENST00000365330 92 ntBASIC3.15□□□□□ -1.91
TRIM41Q8WV44 MIR524-201ENST00000385242 87 ntBASIC3.15□□□□□ -1.91
TRIM41Q8WV44 RNU6ATAC20P-201ENST00000408436 127 ntBASIC3.15□□□□□ -1.91
TRIM41Q8WV44 MIR18B-201ENST00000454574 71 ntBASIC3.15□□□□□ -1.91
TRIM41Q8WV44 RNU11-2P-201ENST00000516898 142 ntBASIC3.15□□□□□ -1.91
TRIM41Q8WV44 RNU6-303P-201ENST00000517091 106 ntBASIC3.15□□□□□ -1.91
TRIM41Q8WV44 MIR4287-201ENST00000579398 78 ntBASIC3.15□□□□□ -1.91
TRIM41Q8WV44 MIR151B-201ENST00000584249 96 ntBASIC3.15□□□□□ -1.91
TRIM41Q8WV44 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM41Q8WV44 SNORA77B-201ENST00000578179 125 ntBASIC3.14□□□□□ -1.91
TRIM41Q8WV44 AC103810.8-201ENST00000607347 118 ntBASIC3.14□□□□□ -1.91
TRIM41Q8WV44 MIR8074-201ENST00000615081 81 ntBASIC3.14□□□□□ -1.91
TRIM41Q8WV44 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM41Q8WV44 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM41Q8WV44 ZNF209P-201ENST00000593450 2304 ntBASIC3.13□□□□□ -1.91
TRIM41Q8WV44 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM41Q8WV44 RNU5F-1-201ENST00000362507 117 ntBASIC3.13□□□□□ -1.91
TRIM41Q8WV44 MIR1257-201ENST00000408490 117 ntBASIC3.13□□□□□ -1.91
TRIM41Q8WV44 Y_RNA.809-201ENST00000516058 95 ntBASIC3.13□□□□□ -1.91
TRIM41Q8WV44 AC019176.1-201ENST00000518519 225 ntBASIC3.13□□□□□ -1.91
TRIM41Q8WV44 MIR548H5-201ENST00000580314 60 ntBASIC3.13□□□□□ -1.91
TRIM41Q8WV44 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC3.13□□□□□ -1.91
TRIM41Q8WV44 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM41Q8WV44 RNA5SP62-201ENST00000363457 110 ntBASIC3.12□□□□□ -1.91
TRIM41Q8WV44 SNORA7.1-201ENST00000363750 139 ntBASIC3.12□□□□□ -1.91
TRIM41Q8WV44 SNORA67.1-201ENST00000364749 141 ntBASIC3.12□□□□□ -1.91
TRIM41Q8WV44 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM41Q8WV44 AL773524.1-201ENST00000614065 229 ntBASIC3.12□□□□□ -1.91
TRIM41Q8WV44 AL157834.3-201ENST00000615543 103 ntBASIC3.12□□□□□ -1.91
TRIM41Q8WV44 TRDV1-202ENST00000621643 102 ntBASIC3.12□□□□□ -1.91
TRIM41Q8WV44 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
TRIM41Q8WV44 Y_RNA.596-201ENST00000410462 109 ntBASIC3.11□□□□□ -1.91
TRIM41Q8WV44 AC244636.1-201ENST00000421152 228 ntBASIC3.11□□□□□ -1.91
TRIM41Q8WV44 AP003716.2-201ENST00000528260 108 ntBASIC3.11□□□□□ -1.91
TRIM41Q8WV44 RNU7-10P-201ENST00000607194 63 ntBASIC3.11□□□□□ -1.91
TRIM41Q8WV44 5S_rRNA.15-201ENST00000611169 127 ntBASIC3.11□□□□□ -1.91
TRIM41Q8WV44 MIR6086-201ENST00000638065 55 ntBASIC3.11□□□□□ -1.91
TRIM41Q8WV44 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM41Q8WV44 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM41Q8WV44 Y_RNA.13-201ENST00000362403 112 ntBASIC3.1□□□□□ -1.91
TRIM41Q8WV44 Y_RNA.239-201ENST00000364444 113 ntBASIC3.1□□□□□ -1.91
TRIM41Q8WV44 SNORA8.1-201ENST00000384250 140 ntBASIC3.1□□□□□ -1.91
TRIM41Q8WV44 AL606490.4-201ENST00000423117 127 ntBASIC3.1□□□□□ -1.91
TRIM41Q8WV44 RNU7-185P-201ENST00000459215 60 ntBASIC3.1□□□□□ -1.91
TRIM41Q8WV44 snoU13.21-201ENST00000459368 105 ntBASIC3.1□□□□□ -1.91
TRIM41Q8WV44 RNU6-687P-201ENST00000516443 89 ntBASIC3.1□□□□□ -1.91
TRIM41Q8WV44 AC036111.3-201ENST00000526389 112 ntBASIC3.1□□□□□ -1.91
TRIM41Q8WV44 MIR6788-201ENST00000618842 66 ntBASIC3.1□□□□□ -1.91
TRIM41Q8WV44 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM41Q8WV44 RNU1-93P-201ENST00000364704 169 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 RNU6-1051P-201ENST00000365471 102 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 Y_RNA.371-201ENST00000365591 113 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 RNU6-649P-201ENST00000384463 107 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 RNU6-35P-201ENST00000384530 107 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 MIR520H-201ENST00000385126 88 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 RNU6-587P-201ENST00000391282 106 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 SNORD30.1-201ENST00000391309 70 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 SNORD83.1-201ENST00000411362 77 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 snoU13.17-201ENST00000458802 104 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 RNU6-634P-201ENST00000459134 106 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 YWHAEP2-201ENST00000580066 112 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 YWHAEP3-201ENST00000582767 121 ntBASIC3.09□□□□□ -1.91
TRIM41Q8WV44 RNU1-42P-201ENST00000364033 160 ntBASIC3.08□□□□□ -1.92
TRIM41Q8WV44 MIR548J-201ENST00000408833 112 ntBASIC3.08□□□□□ -1.92
TRIM41Q8WV44 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM41Q8WV44 Y_RNA.115-201ENST00000363272 98 ntBASIC3.07□□□□□ -1.92
TRIM41Q8WV44 SNORA16B-201ENST00000364674 135 ntBASIC3.07□□□□□ -1.92
TRIM41Q8WV44 Y_RNA.330-201ENST00000365230 109 ntBASIC3.07□□□□□ -1.92
TRIM41Q8WV44 MIR154-201ENST00000385243 84 ntBASIC3.07□□□□□ -1.92
TRIM41Q8WV44 RNU6-1054P-201ENST00000411293 104 ntBASIC3.07□□□□□ -1.92
TRIM41Q8WV44 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM41Q8WV44 Y_RNA.207-201ENST00000364142 106 ntBASIC3.06□□□□□ -1.92
TRIM41Q8WV44 MIR216A-201ENST00000385063 110 ntBASIC3.06□□□□□ -1.92
TRIM41Q8WV44 HMGN2P38-201ENST00000423806 265 ntBASIC3.06□□□□□ -1.92
TRIM41Q8WV44 AC092628.1-201ENST00000436250 252 ntBASIC3.06□□□□□ -1.92
TRIM41Q8WV44 Y_RNA.697-201ENST00000516776 113 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms