Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 RPS27P16-201ENST00000425758 201 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 Y_RNA.809-201ENST00000516058 95 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 MIR548H5-201ENST00000580314 60 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 MIR4696-201ENST00000581431 70 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 RNU7-10P-201ENST00000607194 63 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 MIR8081-201ENST00000611533 95 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 ZNF209P-201ENST00000593450 2304 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 RNY4P3-201ENST00000365254 95 ntBASIC1.91□□□□□ -2.1
SHKBP1Q8TBC3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SHKBP1Q8TBC3 SNORD13-201ENST00000459299 104 ntBASIC1.91□□□□□ -2.1
SHKBP1Q8TBC3 AC055731.1-201ENST00000474387 401 ntBASIC1.91□□□□□ -2.1
SHKBP1Q8TBC3 SNORA25.15-201ENST00000516487 89 ntBASIC1.91□□□□□ -2.1
SHKBP1Q8TBC3 MIR514B-201ENST00000516774 80 ntBASIC1.91□□□□□ -2.1
SHKBP1Q8TBC3 MIR3140-201ENST00000583685 90 ntBASIC1.91□□□□□ -2.1
SHKBP1Q8TBC3 U6.100-201ENST00000636230 99 ntBASIC1.91□□□□□ -2.1
SHKBP1Q8TBC3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SHKBP1Q8TBC3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.9□□□□□ -2.1
SHKBP1Q8TBC3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SHKBP1Q8TBC3 RNU6-664P-201ENST00000362381 107 ntBASIC1.9□□□□□ -2.11
SHKBP1Q8TBC3 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
SHKBP1Q8TBC3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.9□□□□□ -2.11
SHKBP1Q8TBC3 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
SHKBP1Q8TBC3 AC092628.1-201ENST00000436250 252 ntBASIC1.9□□□□□ -2.11
SHKBP1Q8TBC3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.9□□□□□ -2.11
SHKBP1Q8TBC3 MTRNR2L2-201ENST00000604882 87 ntBASIC1.9□□□□□ -2.11
SHKBP1Q8TBC3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SHKBP1Q8TBC3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.89□□□□□ -2.11
SHKBP1Q8TBC3 SNORD101-201ENST00000384027 73 ntBASIC1.89□□□□□ -2.11
SHKBP1Q8TBC3 Y_RNA.606-201ENST00000410579 103 ntBASIC1.89□□□□□ -2.11
SHKBP1Q8TBC3 MIR2113-201ENST00000459007 91 ntBASIC1.89□□□□□ -2.11
SHKBP1Q8TBC3 RNU7-185P-201ENST00000459215 60 ntBASIC1.89□□□□□ -2.11
SHKBP1Q8TBC3 AC005520.4-201ENST00000604337 90 ntBASIC1.89□□□□□ -2.11
SHKBP1Q8TBC3 MIR6082-201ENST00000613604 109 ntBASIC1.89□□□□□ -2.11
SHKBP1Q8TBC3 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.89□□□□□ -2.11
SHKBP1Q8TBC3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.88□□□□□ -2.11
SHKBP1Q8TBC3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SHKBP1Q8TBC3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.88□□□□□ -2.11
SHKBP1Q8TBC3 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
SHKBP1Q8TBC3 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
SHKBP1Q8TBC3 AC023934.1-201ENST00000574529 2389 ntBASIC1.87□□□□□ -2.11
SHKBP1Q8TBC3 snoU13.21-201ENST00000459368 105 ntBASIC1.87□□□□□ -2.11
SHKBP1Q8TBC3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.87□□□□□ -2.11
SHKBP1Q8TBC3 RNU6-681P-201ENST00000364012 104 ntBASIC1.86□□□□□ -2.11
SHKBP1Q8TBC3 SNORA24B-201ENST00000384176 131 ntBASIC1.86□□□□□ -2.11
SHKBP1Q8TBC3 AC097635.1-201ENST00000450678 155 ntBASIC1.86□□□□□ -2.11
SHKBP1Q8TBC3 MIR3675-201ENST00000583661 73 ntBASIC1.86□□□□□ -2.11
SHKBP1Q8TBC3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHKBP1Q8TBC3 SNORD48-201ENST00000364953 64 ntBASIC1.85□□□□□ -2.11
SHKBP1Q8TBC3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SHKBP1Q8TBC3 SNORD23.1-201ENST00000408212 104 ntBASIC1.85□□□□□ -2.11
SHKBP1Q8TBC3 MIR1257-201ENST00000408490 117 ntBASIC1.85□□□□□ -2.11
SHKBP1Q8TBC3 AC097510.1-201ENST00000510945 133 ntBASIC1.85□□□□□ -2.11
SHKBP1Q8TBC3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.85□□□□□ -2.11
SHKBP1Q8TBC3 RNU6-765P-201ENST00000516916 99 ntBASIC1.85□□□□□ -2.11
SHKBP1Q8TBC3 MIR4498-201ENST00000577599 66 ntBASIC1.85□□□□□ -2.11
SHKBP1Q8TBC3 U6.81-201ENST00000612550 106 ntBASIC1.85□□□□□ -2.11
SHKBP1Q8TBC3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.85□□□□□ -2.11
SHKBP1Q8TBC3 RNU6-824P-201ENST00000363724 104 ntBASIC1.84□□□□□ -2.11
SHKBP1Q8TBC3 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
SHKBP1Q8TBC3 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
SHKBP1Q8TBC3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SHKBP1Q8TBC3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 SNORD45A-201ENST00000384512 84 ntBASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-630P-201ENST00000391258 106 ntBASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-935P-201ENST00000410371 100 ntBASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 AC093423.1-201ENST00000440817 142 ntBASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 MIR4255-201ENST00000579351 72 ntBASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 AL773524.1-201ENST00000614065 229 ntBASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 MIR8074-201ENST00000615081 81 ntBASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SHKBP1Q8TBC3 MIR337-201ENST00000362281 93 ntBASIC1.82□□□□□ -2.12
SHKBP1Q8TBC3 MIR599-201ENST00000385069 95 ntBASIC1.82□□□□□ -2.12
SHKBP1Q8TBC3 SNORD83.1-201ENST00000411362 77 ntBASIC1.82□□□□□ -2.12
SHKBP1Q8TBC3 AC244636.1-201ENST00000421152 228 ntBASIC1.82□□□□□ -2.12
SHKBP1Q8TBC3 MIR378A-201ENST00000362177 66 ntBASIC1.81□□□□□ -2.12
SHKBP1Q8TBC3 MIR302D-201ENST00000362275 68 ntBASIC1.81□□□□□ -2.12
SHKBP1Q8TBC3 SNORD115-22-201ENST00000364456 82 ntBASIC1.81□□□□□ -2.12
SHKBP1Q8TBC3 SNORA16B-201ENST00000364674 135 ntBASIC1.81□□□□□ -2.12
SHKBP1Q8TBC3 MIR9-2-201ENST00000384838 87 ntBASIC1.81□□□□□ -2.12
SHKBP1Q8TBC3 MIR451A-201ENST00000385059 72 ntBASIC1.81□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-1052P-201ENST00000411398 104 ntBASIC1.81□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-719P-201ENST00000516671 104 ntBASIC1.81□□□□□ -2.12
SHKBP1Q8TBC3 MIR4303-201ENST00000581299 66 ntBASIC1.81□□□□□ -2.12
SHKBP1Q8TBC3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SHKBP1Q8TBC3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 SNORA25.4-201ENST00000363666 124 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 RNA5SP363-201ENST00000365072 115 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-895P-201ENST00000384125 103 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 Y_RNA.443-201ENST00000384135 111 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 RNU4-62P-201ENST00000410125 130 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-881P-201ENST00000516813 102 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 AC138907.6-201ENST00000568401 126 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms