Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 RNA5SP210-201ENST00000391034 120 ntBASIC2.65□□□□□ -1.99
EFCAB3Q8N7B9 AC108938.1-201ENST00000451204 136 ntBASIC2.65□□□□□ -1.99
EFCAB3Q8N7B9 SNORA44.1-201ENST00000517031 108 ntBASIC2.65□□□□□ -1.99
EFCAB3Q8N7B9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.65□□□□□ -1.99
EFCAB3Q8N7B9 MIR7843-201ENST00000622274 79 ntBASIC2.65□□□□□ -1.99
EFCAB3Q8N7B9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.65□□□□□ -1.99
EFCAB3Q8N7B9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
EFCAB3Q8N7B9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
EFCAB3Q8N7B9 RNU6-859P-201ENST00000362728 107 ntBASIC2.64□□□□□ -1.99
EFCAB3Q8N7B9 SNORA25.5-201ENST00000363782 126 ntBASIC2.64□□□□□ -1.99
EFCAB3Q8N7B9 Y_RNA.236-201ENST00000364427 111 ntBASIC2.64□□□□□ -1.99
EFCAB3Q8N7B9 MIR30A-201ENST00000385092 71 ntBASIC2.64□□□□□ -1.99
EFCAB3Q8N7B9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.64□□□□□ -1.99
EFCAB3Q8N7B9 HMGN2P23-201ENST00000456759 269 ntBASIC2.64□□□□□ -1.99
EFCAB3Q8N7B9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.64□□□□□ -1.99
EFCAB3Q8N7B9 MIR3605-201ENST00000583214 100 ntBASIC2.64□□□□□ -1.99
EFCAB3Q8N7B9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
EFCAB3Q8N7B9 MIR26A1-201ENST00000362205 77 ntBASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 RNU6-940P-201ENST00000363433 104 ntBASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 RNA5SP403-201ENST00000363598 108 ntBASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 RNU6-1335P-201ENST00000365426 107 ntBASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 SNORA75.2-201ENST00000391138 150 ntBASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 SNORA75.3-201ENST00000391231 150 ntBASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 AL512310.8-201ENST00000550183 120 ntBASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
EFCAB3Q8N7B9 Y_RNA.174-201ENST00000363781 105 ntBASIC2.62□□□□□ -1.99
EFCAB3Q8N7B9 MIR617-201ENST00000385030 97 ntBASIC2.62□□□□□ -1.99
EFCAB3Q8N7B9 MIR504-201ENST00000385065 83 ntBASIC2.62□□□□□ -1.99
EFCAB3Q8N7B9 SUMO1P4-201ENST00000429430 302 ntBASIC2.62□□□□□ -1.99
EFCAB3Q8N7B9 AC048334.1-201ENST00000477975 159 ntBASIC2.62□□□□□ -1.99
EFCAB3Q8N7B9 NAMPTP3-201ENST00000569273 224 ntBASIC2.62□□□□□ -1.99
EFCAB3Q8N7B9 MIR548AG2-201ENST00000581228 64 ntBASIC2.62□□□□□ -1.99
EFCAB3Q8N7B9 MIR4524B-201ENST00000581569 115 ntBASIC2.62□□□□□ -1.99
EFCAB3Q8N7B9 AL359821.1-201ENST00000605519 182 ntBASIC2.62□□□□□ -1.99
EFCAB3Q8N7B9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
EFCAB3Q8N7B9 MIR4299-201ENST00000577899 72 ntBASIC2.61□□□□□ -1.99
EFCAB3Q8N7B9 MIR466-201ENST00000580653 84 ntBASIC2.61□□□□□ -1.99
EFCAB3Q8N7B9 MIR4804-201ENST00000581683 73 ntBASIC2.61□□□□□ -1.99
EFCAB3Q8N7B9 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
EFCAB3Q8N7B9 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
EFCAB3Q8N7B9 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
EFCAB3Q8N7B9 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
EFCAB3Q8N7B9 MIR548O2-201ENST00000616090 70 ntBASIC2.61□□□□□ -1.99
EFCAB3Q8N7B9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
EFCAB3Q8N7B9 SNORD115-24-201ENST00000363528 82 ntBASIC2.6□□□□□ -1.99
EFCAB3Q8N7B9 RNU1-119P-201ENST00000391122 165 ntBASIC2.6□□□□□ -1.99
EFCAB3Q8N7B9 snoU13.26-201ENST00000459452 105 ntBASIC2.6□□□□□ -1.99
EFCAB3Q8N7B9 MIR5194-201ENST00000582634 120 ntBASIC2.6□□□□□ -1.99
EFCAB3Q8N7B9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
EFCAB3Q8N7B9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.6□□□□□ -1.99
EFCAB3Q8N7B9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
EFCAB3Q8N7B9 RNU6-1079P-201ENST00000362861 110 ntBASIC2.59□□□□□ -1.99
EFCAB3Q8N7B9 SNORA67.1-201ENST00000364749 141 ntBASIC2.59□□□□□ -1.99
EFCAB3Q8N7B9 MIR7-2-201ENST00000384970 110 ntBASIC2.59□□□□□ -1.99
EFCAB3Q8N7B9 AL138827.1-201ENST00000402666 306 ntBASIC2.59□□□□□ -1.99
EFCAB3Q8N7B9 AL591704.2-201ENST00000421658 181 ntBASIC2.59□□□□□ -1.99
EFCAB3Q8N7B9 RNA5SP24-201ENST00000516478 95 ntBASIC2.59□□□□□ -1.99
EFCAB3Q8N7B9 AC023827.1-201ENST00000569247 97 ntBASIC2.59□□□□□ -1.99
EFCAB3Q8N7B9 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -2
EFCAB3Q8N7B9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
EFCAB3Q8N7B9 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
EFCAB3Q8N7B9 MIR203A-201ENST00000384836 110 ntBASIC2.58□□□□□ -2
EFCAB3Q8N7B9 RNU7-56P-201ENST00000458744 62 ntBASIC2.58□□□□□ -2
EFCAB3Q8N7B9 uc_338.16-201ENST00000621804 95 ntBASIC2.58□□□□□ -2
EFCAB3Q8N7B9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
EFCAB3Q8N7B9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.57□□□□□ -2
EFCAB3Q8N7B9 RNA5SP192-201ENST00000364404 120 ntBASIC2.57□□□□□ -2
EFCAB3Q8N7B9 RNU6-645P-201ENST00000364649 106 ntBASIC2.57□□□□□ -2
EFCAB3Q8N7B9 MIR9-1-201ENST00000385198 89 ntBASIC2.57□□□□□ -2
EFCAB3Q8N7B9 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
EFCAB3Q8N7B9 AC067940.1-201ENST00000458411 300 ntBASIC2.57□□□□□ -2
EFCAB3Q8N7B9 SCARNA21.1-201ENST00000515996 128 ntBASIC2.57□□□□□ -2
EFCAB3Q8N7B9 SNORA31.14-201ENST00000516728 116 ntBASIC2.57□□□□□ -2
EFCAB3Q8N7B9 SNORD53-201ENST00000579969 78 ntBASIC2.57□□□□□ -2
EFCAB3Q8N7B9 MIR3657-201ENST00000584818 117 ntBASIC2.57□□□□□ -2
EFCAB3Q8N7B9 AL137847.3-201ENST00000611521 109 ntBASIC2.57□□□□□ -2
EFCAB3Q8N7B9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
EFCAB3Q8N7B9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
EFCAB3Q8N7B9 Y_RNA.32-201ENST00000362589 110 ntBASIC2.56□□□□□ -2
EFCAB3Q8N7B9 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
EFCAB3Q8N7B9 RNU6-994P-201ENST00000410507 111 ntBASIC2.56□□□□□ -2
EFCAB3Q8N7B9 RNA5SP21-201ENST00000410917 96 ntBASIC2.56□□□□□ -2
EFCAB3Q8N7B9 SNORA31.2-201ENST00000516019 134 ntBASIC2.56□□□□□ -2
EFCAB3Q8N7B9 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
EFCAB3Q8N7B9 MIR4769-201ENST00000584126 77 ntBASIC2.56□□□□□ -2
EFCAB3Q8N7B9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.56□□□□□ -2
EFCAB3Q8N7B9 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
EFCAB3Q8N7B9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.55□□□□□ -2
EFCAB3Q8N7B9 RNU6-369P-201ENST00000362515 102 ntBASIC2.55□□□□□ -2
EFCAB3Q8N7B9 RNA5SP215-201ENST00000363440 122 ntBASIC2.55□□□□□ -2
EFCAB3Q8N7B9 RNU6-260P-201ENST00000384092 107 ntBASIC2.55□□□□□ -2
EFCAB3Q8N7B9 RNU7-161P-201ENST00000517289 62 ntBASIC2.55□□□□□ -2
EFCAB3Q8N7B9 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
EFCAB3Q8N7B9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.55□□□□□ -2
EFCAB3Q8N7B9 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
EFCAB3Q8N7B9 RN7SKP88-201ENST00000516847 250 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 225.9 ms